RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 LBHD1Q9BQE6 289 aaPredicted RBP25.69■■□□□ 1.7
RHBDD3-202ENST00000406335 SENP6Q9GZR1 1112 aaPredicted RBP25.69■■□□□ 1.7
RHBDD3-202ENST00000406335 STXBP5LQ9Y2K9 1186 aa25.69■■□□□ 1.7
RHBDD3-202ENST00000406335 MAP2K5Q13163 448 aa25.68■■□□□ 1.7
RHBDD3-202ENST00000406335 LRRC26Q2I0M4 334 aa25.68■■□□□ 1.7
RHBDD3-202ENST00000406335 METTL16Q86W50 562 aaKnown RBP25.68■■□□□ 1.7
RHBDD3-202ENST00000406335 GPR108Q9NPR9 543 aa25.68■■□□□ 1.7
RHBDD3-202ENST00000406335 RABGAP1Q9Y3P9 1069 aa25.68■■□□□ 1.7
RHBDD3-202ENST00000406335 IVNS1ABPQ9Y6Y0 642 aa25.68■■□□□ 1.7
RHBDD3-202ENST00000406335 LOC285556D6RIA3 1793 aa25.68■■□□□ 1.7
RHBDD3-202ENST00000406335 IDH1O75874 414 aaKnown RBP25.67■■□□□ 1.7
RHBDD3-202ENST00000406335 USP14P54578 494 aa25.67■■□□□ 1.7
RHBDD3-202ENST00000406335 ATP2B2Q01814 1243 aa25.67■■□□□ 1.7
RHBDD3-202ENST00000406335 LHX8Q68G74 356 aa25.67■■□□□ 1.7
RHBDD3-202ENST00000406335 USP6NLQ92738 828 aa25.67■■□□□ 1.7
RHBDD3-202ENST00000406335 CABP5Q9NP86 173 aa25.67■■□□□ 1.7
RHBDD3-202ENST00000406335 PRKAG2Q9UGJ0 569 aa25.67■■□□□ 1.7
RHBDD3-202ENST00000406335 MS4A1P11836 297 aa25.66■■□□□ 1.7
RHBDD3-202ENST00000406335 COL6A1P12109 1028 aa25.66■■□□□ 1.7
RHBDD3-202ENST00000406335 CEP85Q6P2H3 762 aa25.66■■□□□ 1.7
RHBDD3-202ENST00000406335 MIGA1Q8NAN2 632 aa25.66■■□□□ 1.7
RHBDD3-202ENST00000406335 PIH1D3Q9NQM4 214 aaKnown RBP25.66■■□□□ 1.7
RHBDD3-202ENST00000406335 MTMR10Q9NXD2 777 aa25.66■■□□□ 1.7
RHBDD3-202ENST00000406335 COG6Q9Y2V7 657 aa25.66■■□□□ 1.7
RHBDD3-202ENST00000406335 IGSF3O75054 1194 aa25.65■■□□□ 1.7
RHBDD3-202ENST00000406335 CERKLQ49MI3 558 aaPredicted RBP25.64■■□□□ 1.7
RHBDD3-202ENST00000406335 TTC6Q86TZ1 520 aa25.64■■□□□ 1.7
RHBDD3-202ENST00000406335 CCDC8Q9H0W5 538 aaPredicted RBP25.64■■□□□ 1.7
RHBDD3-202ENST00000406335 SERPINB13Q9UIV8 391 aa25.64■■□□□ 1.7
RHBDD3-202ENST00000406335 DOCK3Q8IZD9 2030 aa25.64■■□□□ 1.69
RHBDD3-202ENST00000406335 DDX60LQ5H9U9 1706 aaKnown RBP25.63■■□□□ 1.69
RHBDD3-202ENST00000406335 ATN1P54259 1190 aaPredicted RBP25.63■■□□□ 1.69
RHBDD3-202ENST00000406335 ABCB5Q2M3G0 1257 aa25.63■■□□□ 1.69
RHBDD3-202ENST00000406335 CERS3Q8IU89 383 aa25.63■■□□□ 1.69
RHBDD3-202ENST00000406335 MAGEB6Q8N7X4 407 aa25.63■■□□□ 1.69
RHBDD3-202ENST00000406335 NOP58Q9Y2X3 529 aaKnown RBP25.63■■□□□ 1.69
RHBDD3-202ENST00000406335 SLC15A5A6NIM6 579 aa25.62■■□□□ 1.69
RHBDD3-202ENST00000406335 PTPREP23469 700 aa25.62■■□□□ 1.69
RHBDD3-202ENST00000406335 CATSPERGQ6ZRH7 1159 aa25.62■■□□□ 1.69
RHBDD3-202ENST00000406335 ZNF512BQ96KM6 892 aaPredicted RBP25.62■■□□□ 1.69
RHBDD3-202ENST00000406335 DDX20Q9UHI6 824 aaKnown RBP25.62■■□□□ 1.69
RHBDD3-202ENST00000406335 ATAD5Q96QE3 1844 aa25.61■■□□□ 1.69
RHBDD3-202ENST00000406335 MSCO60682 206 aa25.61■■□□□ 1.69
RHBDD3-202ENST00000406335 TATDN1Q6P1N9 297 aa25.61■■□□□ 1.69
RHBDD3-202ENST00000406335 C12orf42Q96LP6 360 aa25.61■■□□□ 1.69
RHBDD3-202ENST00000406335 CNMDO75829 334 aa25.6■■□□□ 1.69
RHBDD3-202ENST00000406335 MYCNP04198 464 aaPredicted RBP25.6■■□□□ 1.69
RHBDD3-202ENST00000406335 POLR3DP05423 398 aaPredicted RBP25.6■■□□□ 1.69
RHBDD3-202ENST00000406335 MAP3K12Q12852 859 aa25.6■■□□□ 1.69
RHBDD3-202ENST00000406335 C20orf194Q5TEA3 1177 aa25.6■■□□□ 1.69
RHBDD3-202ENST00000406335 POTEEQ6S8J3 1075 aa25.6■■□□□ 1.69
RHBDD3-202ENST00000406335 DPP9Q86TI2 863 aa25.6■■□□□ 1.69
RHBDD3-202ENST00000406335 FLRT1Q9NZU1 646 aa25.6■■□□□ 1.69
RHBDD3-202ENST00000406335 VCAM1P19320 739 aa25.59■■□□□ 1.69
RHBDD3-202ENST00000406335 LPAR1Q92633 364 aa25.59■■□□□ 1.69
RHBDD3-202ENST00000406335 FAM161BQ96MY7 647 aa25.59■■□□□ 1.69
RHBDD3-202ENST00000406335 KIAA1683Q9H0B3 1180 aa25.59■■□□□ 1.69
RHBDD3-202ENST00000406335 RPAP3Q9H6T3 665 aaPredicted RBP25.59■■□□□ 1.69
RHBDD3-202ENST00000406335 DDX19BQ9UMR2 479 aa25.59■■□□□ 1.69
RHBDD3-202ENST00000406335 CDK5RAP2Q96SN8 1893 aa25.59■■□□□ 1.69
RHBDD3-202ENST00000406335 ALPK3Q96L96 1907 aa25.59■■□□□ 1.69
RHBDD3-202ENST00000406335 MPHOSPH10O00566 681 aaKnown RBP25.58■■□□□ 1.69
RHBDD3-202ENST00000406335 CYP2C19P33261 490 aa25.58■■□□□ 1.69
RHBDD3-202ENST00000406335 ACER1Q8TDN7 264 aa25.58■■□□□ 1.69
RHBDD3-202ENST00000406335 ZBTB40Q9NUA8 1239 aa25.58■■□□□ 1.69
RHBDD3-202ENST00000406335 DBNLQ9UJU6 430 aaKnown RBP25.58■■□□□ 1.69
RHBDD3-202ENST00000406335 EXOC6BQ9Y2D4 811 aa25.58■■□□□ 1.69
RHBDD3-202ENST00000406335 EHD4Q9H223 541 aa25.57■■□□□ 1.68
RHBDD3-202ENST00000406335 TLR7Q9NYK1 1049 aaKnown RBP25.57■■□□□ 1.68
RHBDD3-202ENST00000406335 BTBD7Q9P203 1132 aa25.57■■□□□ 1.68
RHBDD3-202ENST00000406335 ATP11BQ9Y2G3 1177 aa25.57■■□□□ 1.68
RHBDD3-202ENST00000406335 MAST2Q6P0Q8 1798 aa25.56■■□□□ 1.68
RHBDD3-202ENST00000406335 LAMA3Q16787 3333 aa25.56■■□□□ 1.68
RHBDD3-202ENST00000406335 ARRDC4Q8NCT1 418 aa25.56■■□□□ 1.68
RHBDD3-202ENST00000406335 NPLOC4Q8TAT6 608 aa25.56■■□□□ 1.68
RHBDD3-202ENST00000406335 PLXNB2O15031 1838 aa25.56■■□□□ 1.68
RHBDD3-202ENST00000406335 DNM1LO00429 736 aa25.55■■□□□ 1.68
RHBDD3-202ENST00000406335 GRB14Q14449 540 aa25.55■■□□□ 1.68
RHBDD3-202ENST00000406335 GJC2Q5T442 439 aaPredicted RBP25.55■■□□□ 1.68
RHBDD3-202ENST00000406335 PRDM5Q9NQX1 630 aaPredicted RBP25.55■■□□□ 1.68
RHBDD3-202ENST00000406335 HOXC10Q9NYD6 342 aa25.55■■□□□ 1.68
RHBDD3-202ENST00000406335 KBTBD13C9JR72 458 aa25.54■■□□□ 1.68
RHBDD3-202ENST00000406335 RTP1P59025 263 aa25.54■■□□□ 1.68
RHBDD3-202ENST00000406335 ZNF697Q5TEC3 545 aa25.54■■□□□ 1.68
RHBDD3-202ENST00000406335 SIRT2Q8IXJ6 389 aa25.54■■□□□ 1.68
RHBDD3-202ENST00000406335 EAF2Q96CJ1 260 aaPredicted RBP25.54■■□□□ 1.68
RHBDD3-202ENST00000406335 TANGO6Q9C0B7 1094 aa25.54■■□□□ 1.68
RHBDD3-202ENST00000406335 MAGEB6P1A0A0J9YX57 407 aa25.53■■□□□ 1.68
RHBDD3-202ENST00000406335 SPDYE16A6NNV3 312 aaPredicted RBP25.53■■□□□ 1.68
RHBDD3-202ENST00000406335 HOXC6P09630 235 aa25.53■■□□□ 1.68
RHBDD3-202ENST00000406335 PLCD1P51178 756 aa25.53■■□□□ 1.68
RHBDD3-202ENST00000406335 PLS1Q14651 629 aa25.53■■□□□ 1.68
RHBDD3-202ENST00000406335 COG2Q14746 738 aa25.53■■□□□ 1.68
RHBDD3-202ENST00000406335 ANO1Q5XXA6 986 aa25.53■■□□□ 1.68
RHBDD3-202ENST00000406335 LBX2Q6XYB7 198 aa25.53■■□□□ 1.68
RHBDD3-202ENST00000406335 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.53■■□□□ 1.68
RHBDD3-202ENST00000406335 ANTXR1Q9H6X2 564 aa25.53■■□□□ 1.68
RHBDD3-202ENST00000406335 SLC5A4Q9NY91 659 aa25.53■■□□□ 1.68
RHBDD3-202ENST00000406335 COL6A3P12111 3177 aa25.52■■□□□ 1.68
RHBDD3-202ENST00000406335 SEPT2Q15019 361 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms