RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 MOGSQ13724 837 aa12.6□□□□□ -0.39
RPAIN-204ENST00000405578 MIGA2Q7L4E1 593 aa12.6□□□□□ -0.39
RPAIN-204ENST00000405578 MAPKAPK5Q8IW41 473 aa12.6□□□□□ -0.39
RPAIN-204ENST00000405578 TDHQ8IZJ6 230 aa12.6□□□□□ -0.39
RPAIN-204ENST00000405578 STRBPQ96SI9 672 aaKnown RBP12.6□□□□□ -0.39
RPAIN-204ENST00000405578 TRIM34Q9BYJ4 488 aa12.6□□□□□ -0.39
RPAIN-204ENST00000405578 PAK6Q9NQU5 681 aaPredicted RBP12.6□□□□□ -0.39
RPAIN-204ENST00000405578 PHIPQ8WWQ0 1821 aa12.6□□□□□ -0.39
RPAIN-204ENST00000405578 M0R2C6 588 aa12.59□□□□□ -0.39
RPAIN-204ENST00000405578 CDC45O75419 566 aa12.59□□□□□ -0.39
RPAIN-204ENST00000405578 CHGBP05060 677 aa12.59□□□□□ -0.39
RPAIN-204ENST00000405578 CAPN2P17655 700 aa12.59□□□□□ -0.39
RPAIN-204ENST00000405578 CHMLP26374 656 aa12.59□□□□□ -0.39
RPAIN-204ENST00000405578 SLFNL1Q499Z3 407 aa12.59□□□□□ -0.39
RPAIN-204ENST00000405578 GIMAP6Q6P9H5 292 aa12.59□□□□□ -0.39
RPAIN-204ENST00000405578 TTC6Q86TZ1 520 aa12.59□□□□□ -0.39
RPAIN-204ENST00000405578 PXYLP1Q8TE99 480 aa12.59□□□□□ -0.39
RPAIN-204ENST00000405578 FAM227BQ96M60 508 aa12.59□□□□□ -0.39
RPAIN-204ENST00000405578 OSBPL5Q9H0X9 879 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-204ENST00000405578 FAM198AQ9UFP1 575 aa12.59□□□□□ -0.39
RPAIN-204ENST00000405578 TAOK2Q9UL54 1235 aa12.59□□□□□ -0.39
RPAIN-204ENST00000405578 DOCK1Q14185 1865 aa12.59□□□□□ -0.39
RPAIN-204ENST00000405578 FLT1P17948 1338 aa12.59□□□□□ -0.39
RPAIN-204ENST00000405578 RPTORQ8N122 1335 aa12.59□□□□□ -0.39
RPAIN-204ENST00000405578 RAD50Q92878 1312 aa12.59□□□□□ -0.39
RPAIN-204ENST00000405578 A0A0D9SFI3 127 aa12.58□□□□□ -0.4
RPAIN-204ENST00000405578 PATL2C9JE40 543 aaKnown RBP12.58□□□□□ -0.4
RPAIN-204ENST00000405578 EIF5BO60841 1220 aaKnown RBP12.58□□□□□ -0.4
RPAIN-204ENST00000405578 POLR3DP05423 398 aaPredicted RBP12.58□□□□□ -0.4
RPAIN-204ENST00000405578 TDO2P48775 406 aa12.58□□□□□ -0.4
RPAIN-204ENST00000405578 IRF5Q13568 498 aa12.58□□□□□ -0.4
RPAIN-204ENST00000405578 GPAT2Q6NUI2 795 aa12.58□□□□□ -0.4
RPAIN-204ENST00000405578 KIAA1211Q6ZU35 1233 aa12.58□□□□□ -0.4
RPAIN-204ENST00000405578 SDR42E1Q8WUS8 393 aa12.58□□□□□ -0.4
RPAIN-204ENST00000405578 SEC62Q99442 399 aaKnown RBP12.58□□□□□ -0.4
RPAIN-204ENST00000405578 UBE2OQ9C0C9 1292 aaKnown RBP12.58□□□□□ -0.4
RPAIN-204ENST00000405578 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.58□□□□□ -0.4
RPAIN-204ENST00000405578 DDX4Q9NQI0 724 aaKnown RBP12.58□□□□□ -0.4
RPAIN-204ENST00000405578 MCM9Q9NXL9 1143 aa12.58□□□□□ -0.4
RPAIN-204ENST00000405578 PI4KBQ9UBF8 816 aa12.58□□□□□ -0.4
RPAIN-204ENST00000405578 CCDC171Q6TFL3 1326 aa12.58□□□□□ -0.4
RPAIN-204ENST00000405578 TNPO2O14787 897 aaKnown RBP12.57□□□□□ -0.4
RPAIN-204ENST00000405578 NAPBQ9H115 298 aa12.57□□□□□ -0.4
RPAIN-204ENST00000405578 DCP1AQ9NPI6 582 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-204ENST00000405578 ARPP21Q9UBL0 812 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-204ENST00000405578 PLXNB2O15031 1838 aa12.57□□□□□ -0.4
RPAIN-204ENST00000405578 MAST2Q6P0Q8 1798 aa12.56□□□□□ -0.4
RPAIN-204ENST00000405578 FRMPD3Q5JV73 1810 aa12.56□□□□□ -0.4
RPAIN-204ENST00000405578 PRKAB2O43741 272 aa12.56□□□□□ -0.4
RPAIN-204ENST00000405578 SLC3A2P08195 630 aaKnown RBP12.56□□□□□ -0.4
RPAIN-204ENST00000405578 CCDC129Q6ZRS4 1044 aa12.56□□□□□ -0.4
RPAIN-204ENST00000405578 FOXP4Q8IVH2 680 aaPredicted RBP12.56□□□□□ -0.4
RPAIN-204ENST00000405578 ZFPM1Q8IX07 1006 aa12.56□□□□□ -0.4
RPAIN-204ENST00000405578 CRACR2BQ8N4Y2 399 aaPredicted RBP12.56□□□□□ -0.4
RPAIN-204ENST00000405578 ANKLE1Q8NAG6 615 aa12.56□□□□□ -0.4
RPAIN-204ENST00000405578 GUCD1Q96NT3 240 aa12.56□□□□□ -0.4
RPAIN-204ENST00000405578 SAP30BPQ9UHR5 308 aaKnown RBP12.56□□□□□ -0.4
RPAIN-204ENST00000405578 PALD1Q9ULE6 856 aa12.56□□□□□ -0.4
RPAIN-204ENST00000405578 ATRNL1Q5VV63 1379 aa12.56□□□□□ -0.4
RPAIN-204ENST00000405578 COL2A1P02458 1487 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-204ENST00000405578 GSG1L2A8MUP6 293 aa12.55□□□□□ -0.4
RPAIN-204ENST00000405578 NOL9Q5SY16 702 aaKnown RBP12.55□□□□□ -0.4
RPAIN-204ENST00000405578 IFNL3Q8IZI9 196 aa12.55□□□□□ -0.4
RPAIN-204ENST00000405578 NBPF3Q9H094 633 aa12.55□□□□□ -0.4
RPAIN-204ENST00000405578 ZNF287Q9HBT7 754 aa12.55□□□□□ -0.4
RPAIN-204ENST00000405578 PRDM6Q9NQX0 595 aa12.55□□□□□ -0.4
RPAIN-204ENST00000405578 CTNNA3Q9UI47 895 aa12.55□□□□□ -0.4
RPAIN-204ENST00000405578 HERC5Q9UII4 1024 aaKnown RBP12.55□□□□□ -0.4
RPAIN-204ENST00000405578 ZNF112Q9UJU3 913 aa12.55□□□□□ -0.4
RPAIN-204ENST00000405578 VCANP13611 3396 aa12.55□□□□□ -0.4
RPAIN-204ENST00000405578 EYSQ5T1H1 3165 aa12.55□□□□□ -0.4
RPAIN-204ENST00000405578 DDTLA6NHG4 134 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-204ENST00000405578 USP17L12C9JPN9 530 aa12.54□□□□□ -0.4
RPAIN-204ENST00000405578 USP17L21D6R901 530 aa12.54□□□□□ -0.4
RPAIN-204ENST00000405578 CXCL11O14625 94 aa12.54□□□□□ -0.4
RPAIN-204ENST00000405578 SGSM2O43147 1006 aa12.54□□□□□ -0.4
RPAIN-204ENST00000405578 HSPD1P10809 573 aaKnown RBP12.54□□□□□ -0.4
RPAIN-204ENST00000405578 GADL1Q6ZQY3 521 aa12.54□□□□□ -0.4
RPAIN-204ENST00000405578 ZNF589Q86UQ0 364 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-204ENST00000405578 FAM161BQ96MY7 647 aa12.54□□□□□ -0.4
RPAIN-204ENST00000405578 ESYT1Q9BSJ8 1104 aa12.54□□□□□ -0.4
RPAIN-204ENST00000405578 DSCC1Q9BVC3 393 aa12.54□□□□□ -0.4
RPAIN-204ENST00000405578 EHD4Q9H223 541 aa12.54□□□□□ -0.4
RPAIN-204ENST00000405578 C11orf49Q9H6J7 331 aa12.54□□□□□ -0.4
RPAIN-204ENST00000405578 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.54□□□□□ -0.42e-7■■□□□ 11.6
RPAIN-204ENST00000405578 SERPINB13Q9UIV8 391 aa12.54□□□□□ -0.4
RPAIN-204ENST00000405578 LOC285556D6RIA3 1793 aa12.53□□□□□ -0.4
RPAIN-204ENST00000405578 LAMA2P24043 3122 aaKnown RBP12.53□□□□□ -0.4
RPAIN-204ENST00000405578 ATAD5Q96QE3 1844 aa12.53□□□□□ -0.4
RPAIN-204ENST00000405578 MINDY4BA8MYZ0 360 aa12.53□□□□□ -0.4
RPAIN-204ENST00000405578 TBC1D12O60347 775 aa12.53□□□□□ -0.4
RPAIN-204ENST00000405578 ALX1Q15699 326 aa12.53□□□□□ -0.4
RPAIN-204ENST00000405578 SBK1Q52WX2 424 aa12.53□□□□□ -0.4
RPAIN-204ENST00000405578 SH3BP5LQ7L8J4 393 aa12.53□□□□□ -0.4
RPAIN-204ENST00000405578 SMCR8Q8TEV9 937 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-204ENST00000405578 COA7Q96BR5 231 aa12.53□□□□□ -0.4
RPAIN-204ENST00000405578 SWAP70Q9UH65 585 aa12.53□□□□□ -0.4
RPAIN-204ENST00000405578 MYH2Q9UKX2 1941 aa12.52□□□□□ -0.4
RPAIN-204ENST00000405578 TTC28Q96AY4 2481 aa12.52□□□□□ -0.4
RPAIN-204ENST00000405578 A0A0G2JLL6 359 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms