RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 FOXN1O15353 648 aa22.65■■□□□ 1.22
CCDC47-202ENST00000403162 ATP8B1O43520 1251 aa22.65■■□□□ 1.22
CCDC47-202ENST00000403162 UQCRFS1P1P0C7P4 283 aa22.65■■□□□ 1.22
CCDC47-202ENST00000403162 PTPREP23469 700 aa22.65■■□□□ 1.22
CCDC47-202ENST00000403162 SARSP49591 514 aaKnown RBP22.65■■□□□ 1.22
CCDC47-202ENST00000403162 SPECC1LQ69YQ0 1117 aa22.65■■□□□ 1.22
CCDC47-202ENST00000403162 TRIML1Q8N9V2 468 aa22.65■■□□□ 1.22
CCDC47-202ENST00000403162 AIDAQ96BJ3 306 aa22.65■■□□□ 1.22
CCDC47-202ENST00000403162 MYL10Q9BUA6 226 aa22.65■■□□□ 1.22
CCDC47-202ENST00000403162 FBXO2Q9UK22 296 aaPredicted RBP22.65■■□□□ 1.22
CCDC47-202ENST00000403162 PLA2G4AP47712 749 aa22.65■■□□□ 1.22
CCDC47-202ENST00000403162 TOB1P50616 345 aaPredicted RBP22.65■■□□□ 1.22
CCDC47-202ENST00000403162 TC2NQ8N9U0 490 aa22.65■■□□□ 1.22
CCDC47-202ENST00000403162 CNNM2Q9H8M5 875 aa22.65■■□□□ 1.22
CCDC47-202ENST00000403162 WWC3Q9ULE0 1092 aa22.65■■□□□ 1.22
CCDC47-202ENST00000403162 DOCK2Q92608 1830 aa22.64■■□□□ 1.21
CCDC47-202ENST00000403162 PDE8BO95263 885 aa22.64■■□□□ 1.21
CCDC47-202ENST00000403162 MORC3Q14149 939 aa22.64■■□□□ 1.21
CCDC47-202ENST00000403162 SAFBQ15424 915 aaKnown RBP eCLIP22.64■■□□□ 1.21
CCDC47-202ENST00000403162 ZNF579Q8NAF0 562 aaKnown RBP22.64■■□□□ 1.21
CCDC47-202ENST00000403162 FOXP1Q9H334 677 aaPredicted RBP22.64■■□□□ 1.21
CCDC47-202ENST00000403162 ZSWIM5Q9P217 1185 aa22.64■■□□□ 1.21
CCDC47-202ENST00000403162 RTL9Q8NET4 1388 aa22.63■■□□□ 1.21
CCDC47-202ENST00000403162 PATL2C9JE40 543 aaKnown RBP22.63■■□□□ 1.21
CCDC47-202ENST00000403162 IFIT3O14879 490 aaKnown RBP22.63■■□□□ 1.21
CCDC47-202ENST00000403162 MAP3K9P80192 1104 aa22.63■■□□□ 1.21
CCDC47-202ENST00000403162 RILPL1Q5EBL4 403 aa22.63■■□□□ 1.21
CCDC47-202ENST00000403162 EPB41L4AQ9HCS5 686 aaPredicted RBP22.63■■□□□ 1.21
CCDC47-202ENST00000403162 NFE2L3Q9Y4A8 694 aa22.63■■□□□ 1.21
CCDC47-202ENST00000403162 BTBD18B2RXH4 712 aa22.63■■□□□ 1.21
CCDC47-202ENST00000403162 UBE2Q2LH0YL09 131 aa22.63■■□□□ 1.21
CCDC47-202ENST00000403162 CASQ1P31415 396 aa22.63■■□□□ 1.21
CCDC47-202ENST00000403162 PHKA1P46020 1223 aa22.63■■□□□ 1.21
CCDC47-202ENST00000403162 FMR1Q06787 632 aaKnown RBP eCLIP22.63■■□□□ 1.21
CCDC47-202ENST00000403162 DIS3L2Q8IYB7 885 aaKnown RBP22.63■■□□□ 1.21
CCDC47-202ENST00000403162 PTPN21Q16825 1174 aa22.62■■□□□ 1.21
CCDC47-202ENST00000403162 IFNL3Q8IZI9 196 aa22.62■■□□□ 1.21
CCDC47-202ENST00000403162 SMARCE1Q969G3 411 aa22.62■■□□□ 1.21
CCDC47-202ENST00000403162 TAOK2Q9UL54 1235 aa22.62■■□□□ 1.21
CCDC47-202ENST00000403162 LRP5O75197 1615 aa22.62■■□□□ 1.21
CCDC47-202ENST00000403162 SPECC1Q5M775 1068 aa22.62■■□□□ 1.21
CCDC47-202ENST00000403162 KANK3Q6NY19 840 aa22.62■■□□□ 1.21
CCDC47-202ENST00000403162 KRT23Q9C075 422 aa22.62■■□□□ 1.21
CCDC47-202ENST00000403162 NAPBQ9H115 298 aa22.62■■□□□ 1.21
CCDC47-202ENST00000403162 MRFAP1Q9Y605 127 aa22.62■■□□□ 1.21
CCDC47-202ENST00000403162 POLR2DO15514 142 aaKnown RBP22.61■■□□□ 1.21
CCDC47-202ENST00000403162 PRR29P0C7W0 189 aa22.61■■□□□ 1.21
CCDC47-202ENST00000403162 TRIM22Q8IYM9 498 aa22.61■■□□□ 1.21
CCDC47-202ENST00000403162 WDR24Q96S15 920 aa22.61■■□□□ 1.21
CCDC47-202ENST00000403162 SERTAD1Q9UHV2 236 aa22.61■■□□□ 1.21
CCDC47-202ENST00000403162 TNRC6CQ9HCJ0 1690 aaKnown RBP22.61■■□□□ 1.21
CCDC47-202ENST00000403162 CDK11BP21127 795 aaKnown RBP22.6■■□□□ 1.21
CCDC47-202ENST00000403162 GUCY1A2P33402 732 aa22.6■■□□□ 1.21
CCDC47-202ENST00000403162 GNG11P61952 73 aa22.6■■□□□ 1.21
CCDC47-202ENST00000403162 GRIN1Q05586 938 aa22.6■■□□□ 1.21
CCDC47-202ENST00000403162 AKNAD1Q5T1N1 836 aa22.6■■□□□ 1.21
CCDC47-202ENST00000403162 GPR161Q8N6U8 529 aaKnown RBP22.6■■□□□ 1.21
CCDC47-202ENST00000403162 PDILTQ8N807 584 aa22.6■■□□□ 1.21
CCDC47-202ENST00000403162 SPATA20Q8TB22 786 aa22.6■■□□□ 1.21
CCDC47-202ENST00000403162 CDC5LQ99459 802 aaKnown RBP22.6■■□□□ 1.21
CCDC47-202ENST00000403162 INCENPQ9NQS7 918 aa22.6■■□□□ 1.21
CCDC47-202ENST00000403162 CASZ1Q86V15 1759 aa22.6■■□□□ 1.21
CCDC47-202ENST00000403162 IGHMBP2P38935 993 aaKnown RBP22.6■■□□□ 1.21
CCDC47-202ENST00000403162 CTDSPL2Q05D32 466 aa22.6■■□□□ 1.21
CCDC47-202ENST00000403162 TOGARAM2Q6ZUX3 1019 aa22.6■■□□□ 1.21
CCDC47-202ENST00000403162 KIFC2Q96AC6 838 aa22.6■■□□□ 1.21
CCDC47-202ENST00000403162 RAI14Q9P0K7 980 aa22.6■■□□□ 1.21
CCDC47-202ENST00000403162 SRPRBQ9Y5M8 271 aaKnown RBP22.6■■□□□ 1.21
CCDC47-202ENST00000403162 TACC3Q9Y6A5 838 aa22.6■■□□□ 1.21
CCDC47-202ENST00000403162 ACTN4O43707 911 aaKnown RBP22.59■■□□□ 1.21
CCDC47-202ENST00000403162 CYP2C19P33261 490 aa22.59■■□□□ 1.21
CCDC47-202ENST00000403162 PUM3Q15397 648 aaKnown RBP22.59■■□□□ 1.21
CCDC47-202ENST00000403162 LPIN2Q92539 896 aa22.59■■□□□ 1.21
CCDC47-202ENST00000403162 MTA3Q9BTC8 594 aa22.59■■□□□ 1.21
CCDC47-202ENST00000403162 UBXN6Q9BZV1 441 aa22.59■■□□□ 1.21
CCDC47-202ENST00000403162 FGFR2P21802 821 aa22.59■■□□□ 1.21
CCDC47-202ENST00000403162 ERCC5P28715 1186 aaPredicted RBP22.59■■□□□ 1.21
CCDC47-202ENST00000403162 PLCD1P51178 756 aa22.59■■□□□ 1.21
CCDC47-202ENST00000403162 RCAN1P53805 252 aa22.59■■□□□ 1.21
CCDC47-202ENST00000403162 NR1I3Q14994 352 aa22.59■■□□□ 1.21
CCDC47-202ENST00000403162 RTN1Q16799 776 aa22.59■■□□□ 1.21
CCDC47-202ENST00000403162 CT47A1Q5JQC4 288 aaPredicted RBP22.59■■□□□ 1.21
CCDC47-202ENST00000403162 ILDR2Q71H61 639 aa22.59■■□□□ 1.21
CCDC47-202ENST00000403162 RSRC2Q7L4I2 434 aaKnown RBP22.59■■□□□ 1.21
CCDC47-202ENST00000403162 CEP131Q9UPN4 1083 aa22.59■■□□□ 1.21
CCDC47-202ENST00000403162 MBD4O95243 580 aa22.58■■□□□ 1.21
CCDC47-202ENST00000403162 DEXIO95424 95 aa22.58■■□□□ 1.21
CCDC47-202ENST00000403162 ADKP55263 362 aaKnown RBP22.58■■□□□ 1.21
CCDC47-202ENST00000403162 PPP2R3AQ06190 1150 aa22.58■■□□□ 1.21
CCDC47-202ENST00000403162 HSP90AA4PQ58FG1 418 aa22.58■■□□□ 1.21
CCDC47-202ENST00000403162 ANKRD18AQ8IVF6 992 aa22.58■■□□□ 1.21
CCDC47-202ENST00000403162 FAM177A1Q8N128 213 aaPredicted RBP22.58■■□□□ 1.21
CCDC47-202ENST00000403162 STAG1Q8WVM7 1258 aa22.58■■□□□ 1.21
CCDC47-202ENST00000403162 MED15Q96RN5 788 aa22.58■■□□□ 1.21
CCDC47-202ENST00000403162 KCNJ14Q9UNX9 436 aa22.58■■□□□ 1.21
CCDC47-202ENST00000403162 A0A1B0GTH6 734 aa22.57■■□□□ 1.2
CCDC47-202ENST00000403162 MFSD6Q6ZSS7 791 aa22.57■■□□□ 1.2
CCDC47-202ENST00000403162 SLC16A10Q8TF71 515 aa22.57■■□□□ 1.2
CCDC47-202ENST00000403162 MAP3K12Q12852 859 aa22.57■■□□□ 1.2
CCDC47-202ENST00000403162 SART3Q15020 963 aaKnown RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms