RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 HSD3B7Q9H2F3 369 aa14.9□□□□□ -0.02
PRAME-203ENST00000402697 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.9□□□□□ -0.021e-7■■□□□ 11.9
PRAME-203ENST00000402697 MYH13Q9UKX3 1938 aa14.9□□□□□ -0.02
PRAME-203ENST00000402697 ADRA2BP18089 450 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 GTF2E1P29083 439 aaPredicted RBP14.89□□□□□ -0.03
PRAME-203ENST00000402697 LMOD1P29536 600 aaPredicted RBP14.89□□□□□ -0.03
PRAME-203ENST00000402697 RFC4P35249 363 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 GYG1P46976 350 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 TRAPPC3LQ5T215 181 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 CERS3Q8IU89 383 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 VSTM4Q8IW00 320 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 CGNQ9P2M7 1197 aaKnown RBP14.89□□□□□ -0.03
PRAME-203ENST00000402697 KCNJ14Q9UNX9 436 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 LAMB1P07942 1786 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 A0A087WWV3 80 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 GOLGA6L9A6NEM1 432 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 TRIM37O94972 964 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 TROAPQ12815 778 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 MORC3Q14149 939 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 SLC27A3Q5K4L6 730 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 ARMCX5Q6P1M9 558 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 ADGRA1Q86SQ6 560 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 SDR42E1Q8WUS8 393 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 FBXW7Q969H0 707 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 ZKSCAN3Q9BRR0 538 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 TMX1Q9H3N1 280 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 CCDC88AQ3V6T2 1871 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 MYH2Q9UKX2 1941 aa14.89□□□□□ -0.03
PRAME-203ENST00000402697 COL1A1P02452 1464 aaPredicted RBP14.88□□□□□ -0.03
PRAME-203ENST00000402697 HIBADHP31937 336 aaKnown RBP14.88□□□□□ -0.03
PRAME-203ENST00000402697 PDE4BQ07343 736 aa14.88□□□□□ -0.03
PRAME-203ENST00000402697 ARID5BQ14865 1188 aa14.88□□□□□ -0.03
PRAME-203ENST00000402697 PKN1Q16512 942 aa14.88□□□□□ -0.03
PRAME-203ENST00000402697 CTR9Q6PD62 1173 aa14.88□□□□□ -0.03
PRAME-203ENST00000402697 TMTC3Q6ZXV5 915 aa14.88□□□□□ -0.03
PRAME-203ENST00000402697 FOXP4Q8IVH2 680 aaPredicted RBP14.88□□□□□ -0.03
PRAME-203ENST00000402697 CTCFLQ8NI51 663 aaPredicted RBP14.88□□□□□ -0.03
PRAME-203ENST00000402697 NSUN4Q96CB9 384 aaKnown RBP14.88□□□□□ -0.03
PRAME-203ENST00000402697 ERO1AQ96HE7 468 aa14.88□□□□□ -0.03
PRAME-203ENST00000402697 MAN1B1Q9UKM7 699 aa14.88□□□□□ -0.03
PRAME-203ENST00000402697 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.88□□□□□ -0.03
PRAME-203ENST00000402697 POLR2DO15514 142 aaKnown RBP14.88□□□□□ -0.03
PRAME-203ENST00000402697 TOP1P11387 765 aaKnown RBP14.88□□□□□ -0.03
PRAME-203ENST00000402697 KIF5BP33176 963 aa14.88□□□□□ -0.03
PRAME-203ENST00000402697 SEMA3FQ13275 785 aa14.88□□□□□ -0.03
PRAME-203ENST00000402697 CFAP100Q494V2 611 aa14.88□□□□□ -0.03
PRAME-203ENST00000402697 TPTE2Q6XPS3 522 aa14.88□□□□□ -0.03
PRAME-203ENST00000402697 IQSEC3Q9UPP2 1182 aaPredicted RBP14.88□□□□□ -0.03
PRAME-203ENST00000402697 PCDHB6Q9Y5E3 794 aa14.88□□□□□ -0.03
PRAME-203ENST00000402697 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.87□□□□□ -0.03
PRAME-203ENST00000402697 ACTN4O43707 911 aaKnown RBP14.87□□□□□ -0.03
PRAME-203ENST00000402697 SLFN14P0C7P3 912 aa14.87□□□□□ -0.03
PRAME-203ENST00000402697 NFIXQ14938 502 aa14.87□□□□□ -0.03
PRAME-203ENST00000402697 E4F1Q66K89 784 aaPredicted RBP14.87□□□□□ -0.03
PRAME-203ENST00000402697 GSDMAQ96QA5 445 aa14.87□□□□□ -0.03
PRAME-203ENST00000402697 CABP5Q9NP86 173 aa14.87□□□□□ -0.03
PRAME-203ENST00000402697 SH3GLB2Q9NR46 395 aa14.87□□□□□ -0.03
PRAME-203ENST00000402697 ZSCAN12O43309 604 aa14.86□□□□□ -0.03
PRAME-203ENST00000402697 ZNF18P17022 549 aa14.86□□□□□ -0.03
PRAME-203ENST00000402697 CALML3P27482 149 aa14.86□□□□□ -0.03
PRAME-203ENST00000402697 PLCD1P51178 756 aa14.86□□□□□ -0.03
PRAME-203ENST00000402697 ANKS1AQ92625 1134 aa14.86□□□□□ -0.03
PRAME-203ENST00000402697 L2HGDHQ9H9P8 463 aa14.86□□□□□ -0.03
PRAME-203ENST00000402697 SERTAD1Q9UHV2 236 aa14.86□□□□□ -0.03
PRAME-203ENST00000402697 TNS1Q9HBL0 1735 aaKnown RBP14.86□□□□□ -0.03
PRAME-203ENST00000402697 ARHGAP6O43182 974 aa14.86□□□□□ -0.03
PRAME-203ENST00000402697 TM4SF1P30408 202 aa14.86□□□□□ -0.03
PRAME-203ENST00000402697 GNAQP50148 359 aa14.86□□□□□ -0.03
PRAME-203ENST00000402697 NCBP1Q09161 790 aaKnown RBP14.86□□□□□ -0.03
PRAME-203ENST00000402697 NR5A1Q13285 461 aa14.86□□□□□ -0.03
PRAME-203ENST00000402697 ZNF772Q68DY9 489 aaPredicted RBP14.86□□□□□ -0.03
PRAME-203ENST00000402697 SH3RF1Q7Z6J0 888 aa14.86□□□□□ -0.03
PRAME-203ENST00000402697 SMAP1Q8IYB5 467 aaPredicted RBP14.86□□□□□ -0.03
PRAME-203ENST00000402697 PPP1R13BQ96KQ4 1090 aa14.86□□□□□ -0.03
PRAME-203ENST00000402697 SRRTQ9BXP5 876 aaKnown RBP14.86□□□□□ -0.03
PRAME-203ENST00000402697 FANCLQ9NW38 375 aa14.86□□□□□ -0.03
PRAME-203ENST00000402697 BAZ2AQ9UIF9 1905 aaKnown RBP14.85□□□□□ -0.03
PRAME-203ENST00000402697 PHLPP2Q6ZVD8 1323 aa14.85□□□□□ -0.03
PRAME-203ENST00000402697 USP17L12C9JPN9 530 aa14.85□□□□□ -0.03
PRAME-203ENST00000402697 USP17L21D6R901 530 aa14.85□□□□□ -0.03
PRAME-203ENST00000402697 SLU7O95391 586 aaKnown RBP14.85□□□□□ -0.03
PRAME-203ENST00000402697 KLRK1P26718 216 aa14.85□□□□□ -0.03
PRAME-203ENST00000402697 MECOMQ03112 1051 aa14.85□□□□□ -0.03
PRAME-203ENST00000402697 DGKHQ86XP1 1220 aa14.85□□□□□ -0.03
PRAME-203ENST00000402697 TNFRSF25Q93038 417 aa14.85□□□□□ -0.03
PRAME-203ENST00000402697 CTAGE1Q96RT6 745 aa14.85□□□□□ -0.03
PRAME-203ENST00000402697 CSRNP2Q9H175 543 aa14.85□□□□□ -0.03
PRAME-203ENST00000402697 DCP1AQ9NPI6 582 aaPredicted RBP14.85□□□□□ -0.03
PRAME-203ENST00000402697 USP27XA6NNY8 438 aa14.85□□□□□ -0.03
PRAME-203ENST00000402697 ATP1A3P13637 1013 aa14.85□□□□□ -0.03
PRAME-203ENST00000402697 GSTO1P78417 241 aa14.85□□□□□ -0.03
PRAME-203ENST00000402697 TBX2Q13207 712 aaPredicted RBP14.85□□□□□ -0.03
PRAME-203ENST00000402697 ARL6IP4Q66PJ3 421 aaKnown RBP14.85□□□□□ -0.03
PRAME-203ENST00000402697 GALNT17Q6IS24 598 aa14.85□□□□□ -0.03
PRAME-203ENST00000402697 SLC51AQ86UW1 340 aa14.85□□□□□ -0.03
PRAME-203ENST00000402697 PROM2Q8N271 834 aa14.85□□□□□ -0.03
PRAME-203ENST00000402697 WDR66Q8TBY9 1149 aa14.85□□□□□ -0.03
PRAME-203ENST00000402697 LEMD3Q9Y2U8 911 aa14.85□□□□□ -0.03
PRAME-203ENST00000402697 V9GY48 417 aaPredicted RBP14.85□□□□□ -0.03
PRAME-203ENST00000402697 CNTNAP5Q8WYK1 1306 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms