RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 KCNJ14Q9UNX9 436 aa12.34□□□□□ -0.43
LINC00649-202ENST00000400353 ROBO3Q96MS0 1386 aa12.34□□□□□ -0.43
LINC00649-202ENST00000400353 CYP2D7A0A087X1C5 515 aa12.34□□□□□ -0.43
LINC00649-202ENST00000400353 TROAPQ12815 778 aa12.34□□□□□ -0.43
LINC00649-202ENST00000400353 KANK3Q6NY19 840 aa12.34□□□□□ -0.43
LINC00649-202ENST00000400353 KRBA2Q6ZNG9 492 aa12.34□□□□□ -0.43
LINC00649-202ENST00000400353 SMAP1Q8IYB5 467 aaPredicted RBP12.34□□□□□ -0.43
LINC00649-202ENST00000400353 RPGRQ92834 1020 aaKnown RBP12.34□□□□□ -0.43
LINC00649-202ENST00000400353 RBM17Q96I25 401 aaKnown RBP12.34□□□□□ -0.43
LINC00649-202ENST00000400353 PHF20Q9BVI0 1012 aa12.34□□□□□ -0.43
LINC00649-202ENST00000400353 IMPACTQ9P2X3 320 aa12.34□□□□□ -0.43
LINC00649-202ENST00000400353 FBXO2Q9UK22 296 aaPredicted RBP12.34□□□□□ -0.43
LINC00649-202ENST00000400353 KIF5BP33176 963 aa12.33□□□□□ -0.44
LINC00649-202ENST00000400353 TOB1P50616 345 aaPredicted RBP12.33□□□□□ -0.44
LINC00649-202ENST00000400353 GSDMDP57764 484 aa12.33□□□□□ -0.44
LINC00649-202ENST00000400353 PPP4CP60510 307 aa12.33□□□□□ -0.44
LINC00649-202ENST00000400353 OLFM4Q6UX06 510 aa12.33□□□□□ -0.44
LINC00649-202ENST00000400353 PLCD3Q8N3E9 789 aa12.33□□□□□ -0.44
LINC00649-202ENST00000400353 CNNM3Q8NE01 707 aa12.33□□□□□ -0.44
LINC00649-202ENST00000400353 PYCARDQ9ULZ3 195 aa12.33□□□□□ -0.44
LINC00649-202ENST00000400353 SRPRBQ9Y5M8 271 aaKnown RBP12.33□□□□□ -0.44
LINC00649-202ENST00000400353 BAZ2AQ9UIF9 1905 aaKnown RBP12.33□□□□□ -0.44
LINC00649-202ENST00000400353 TRIM75PA6NK02 468 aa12.33□□□□□ -0.44
LINC00649-202ENST00000400353 USP5P45974 858 aa12.33□□□□□ -0.44
LINC00649-202ENST00000400353 PKN1Q16512 942 aa12.33□□□□□ -0.44
LINC00649-202ENST00000400353 DPCR1Q3MIW9 517 aa12.33□□□□□ -0.44
LINC00649-202ENST00000400353 PRR5LQ6MZQ0 368 aa12.33□□□□□ -0.44
LINC00649-202ENST00000400353 AMIGO3Q86WK7 504 aa12.33□□□□□ -0.44
LINC00649-202ENST00000400353 ANKS1AQ92625 1134 aa12.33□□□□□ -0.44
LINC00649-202ENST00000400353 CNTNAP5Q8WYK1 1306 aa12.32□□□□□ -0.44
LINC00649-202ENST00000400353 TSPY2A6NKD2 308 aa12.32□□□□□ -0.44
LINC00649-202ENST00000400353 UBE2Q2LH0YL09 131 aa12.32□□□□□ -0.44
LINC00649-202ENST00000400353 PRDM1O75626 825 aa12.32□□□□□ -0.44
LINC00649-202ENST00000400353 GNAQP50148 359 aa12.32□□□□□ -0.44
LINC00649-202ENST00000400353 CRY2Q49AN0 593 aa12.32□□□□□ -0.44
LINC00649-202ENST00000400353 C12orf60Q5U649 245 aa12.32□□□□□ -0.44
LINC00649-202ENST00000400353 TMC4Q7Z404 712 aa12.32□□□□□ -0.44
LINC00649-202ENST00000400353 DGKHQ86XP1 1220 aa12.32□□□□□ -0.44
LINC00649-202ENST00000400353 CCDC24Q8N4L8 307 aa12.32□□□□□ -0.44
LINC00649-202ENST00000400353 CLIC6Q96NY7 704 aa12.32□□□□□ -0.44
LINC00649-202ENST00000400353 ZNF287Q9HBT7 754 aa12.32□□□□□ -0.44
LINC00649-202ENST00000400353 MCM9Q9NXL9 1143 aa12.32□□□□□ -0.44
LINC00649-202ENST00000400353 DACH1Q9UI36 760 aa12.32□□□□□ -0.44
LINC00649-202ENST00000400353 MYH6P13533 1939 aa12.32□□□□□ -0.44
LINC00649-202ENST00000400353 MYH2Q9UKX2 1941 aa12.32□□□□□ -0.44
LINC00649-202ENST00000400353 UQCRHLA0A096LP55 91 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 DYNC1I1O14576 645 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 BBOX1O75936 387 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 UQCRHP07919 91 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 TXNRD3Q86VQ6 643 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 SLF2Q8IX21 1173 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 FAM177A1Q8N128 213 aaPredicted RBP12.31□□□□□ -0.44
LINC00649-202ENST00000400353 CCDC82Q8N4S0 544 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 FERMT2Q96AC1 680 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 TCP11L1Q9NUJ3 509 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 V9GY48 417 aaPredicted RBP12.31□□□□□ -0.44
LINC00649-202ENST00000400353 UBR3Q6ZT12 1888 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.31□□□□□ -0.44
LINC00649-202ENST00000400353 CBFA2T2O43439 604 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 PLEKHA8P1O95397 391 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 APBA3O96018 575 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 PLCG2P16885 1265 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 TRAPPC10P48553 1259 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 NR5A1Q13285 461 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 UTP14CQ5TAP6 766 aaKnown RBP12.31□□□□□ -0.44
LINC00649-202ENST00000400353 CMTR1Q8N1G2 835 aaKnown RBP12.31□□□□□ -0.44
LINC00649-202ENST00000400353 TRIML1Q8N9V2 468 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 ZNF592Q92610 1267 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 ERCC4Q92889 916 aaPredicted RBP12.31□□□□□ -0.44
LINC00649-202ENST00000400353 KAT14Q9H8E8 782 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 CABP5Q9NP86 173 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 LRRC4BQ9NT99 713 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 VPS54Q9P1Q0 977 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 MKRN1Q9UHC7 482 aaKnown RBP12.31□□□□□ -0.44
LINC00649-202ENST00000400353 GGA1Q9UJY5 639 aa12.31□□□□□ -0.44
LINC00649-202ENST00000400353 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.3□□□□□ -0.44
LINC00649-202ENST00000400353 FAM193AP78312 1265 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 LRRC8AQ8IWT6 810 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 MYRIPQ8NFW9 859 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 OSBPL5Q9H0X9 879 aaPredicted RBP12.3□□□□□ -0.44
LINC00649-202ENST00000400353 SH3GLB2Q9NR46 395 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 NRBP1Q9UHY1 535 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 PCDHB6Q9Y5E3 794 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 BIN1O00499 593 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 SERPINB2P05120 415 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 CYP2D6P10635 497 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 SCG2P13521 617 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 GYS1P13807 737 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 IL1R1P14778 569 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 CALML3P27482 149 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 GPSM2P81274 684 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 MYL5Q02045 173 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 PFKFB3Q16875 520 aaPredicted RBP12.3□□□□□ -0.44
LINC00649-202ENST00000400353 LONRF3Q496Y0 759 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 CT47A1Q5JQC4 288 aaPredicted RBP12.3□□□□□ -0.44
LINC00649-202ENST00000400353 METTL16Q86W50 562 aaKnown RBP12.3□□□□□ -0.44
LINC00649-202ENST00000400353 CCDC150Q8NCX0 1101 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 OXER1Q8TDS5 423 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 TBC1D22AQ8WUA7 517 aa12.3□□□□□ -0.44
LINC00649-202ENST00000400353 CRAMP1Q96RY5 1269 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms