RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 PTPN18Q99952 460 aa12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 CFHR5Q9BXR6 569 aa12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 ZCCHC17Q9NP64 241 aaKnown RBP12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 SAGE1Q9NXZ1 904 aa12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 GTF3C3Q9Y5Q9 886 aa12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 RLFQ13129 1914 aa12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 PCNTO95613 3336 aa12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 CCL15-CCL14A0A0B4J2E2 113 aa12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 TRIM75PA6NK02 468 aa12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 C19orf81C9J6K1 198 aa12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 USP17L10C9JJH3 530 aa12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 IGF2BP3O00425 579 aaKnown RBP eCLIP12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 MPHOSPH10O00566 681 aaKnown RBP12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 PRDM1O75626 825 aa12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 ALDH1A1P00352 501 aa12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 CYP21A2P08686 494 aa12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 BACE1P56817 501 aa12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 HAND2P61296 217 aa12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 CCL15Q16663 113 aa12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 FASTKD5Q7L8L6 764 aaKnown RBP12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 SIAH1Q8IUQ4 282 aa12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 TBC1D10CQ8IV04 446 aa12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 PROCA1Q8NCQ7 364 aaPredicted RBP12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 NEDD1Q8NHV4 660 aa12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 RNF41Q9H4P4 317 aaPredicted RBP12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 KANSL2Q9H9L4 492 aa12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 INCENPQ9NQS7 918 aa12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 RBM8AQ9Y5S9 174 aaKnown RBP12.39□□□□□ -0.43
CYCSP55-201ENST00000399027 A0A0G2JMZ2 1700 aa12.38□□□□□ -0.43
CYCSP55-201ENST00000399027 CA12O43570 354 aa12.38□□□□□ -0.43
CYCSP55-201ENST00000399027 ICA1Q05084 483 aa12.38□□□□□ -0.43
CYCSP55-201ENST00000399027 MTMR2Q13614 643 aa12.38□□□□□ -0.43
CYCSP55-201ENST00000399027 NECTIN1Q15223 517 aa12.38□□□□□ -0.43
CYCSP55-201ENST00000399027 OTUD7BQ6GQQ9 843 aa12.38□□□□□ -0.43
CYCSP55-201ENST00000399027 GPAT2Q6NUI2 795 aa12.38□□□□□ -0.43
CYCSP55-201ENST00000399027 MFSD6Q6ZSS7 791 aa12.38□□□□□ -0.43
CYCSP55-201ENST00000399027 ANKRD23Q86SG2 305 aa12.38□□□□□ -0.43
CYCSP55-201ENST00000399027 C12orf42Q96LP6 360 aa12.38□□□□□ -0.43
CYCSP55-201ENST00000399027 KIAA1683Q9H0B3 1180 aa12.38□□□□□ -0.43
CYCSP55-201ENST00000399027 ANO2Q9NQ90 1003 aa12.38□□□□□ -0.43
CYCSP55-201ENST00000399027 RNF186Q9NXI6 227 aa12.38□□□□□ -0.43
CYCSP55-201ENST00000399027 SLC45A1Q9Y2W3 748 aa12.38□□□□□ -0.43
CYCSP55-201ENST00000399027 MGAMO43451 1857 aa12.38□□□□□ -0.43
CYCSP55-201ENST00000399027 NEDD4P46934 1319 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 A0A1W2PRG0 241 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 TSPY2A6NKD2 308 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 BTBD19C9JJ37 291 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 EPB41L2O43491 1005 aaKnown RBP12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 TSPY3P0CV98 308 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 TSPY8P0CW00 308 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 NOVP48745 357 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 USP14P54578 494 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 HMGCS2P54868 508 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 TFAP4Q01664 338 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 FAM47AQ5JRC9 791 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 USP17L2Q6R6M4 530 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 FAM43AQ8N2R8 423 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 ACER1Q8TDN7 264 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 ARHGEF10LQ9HCE6 1279 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 TCP11L1Q9NUJ3 509 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 NYAP2Q9P242 653 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 SYNPO2Q9UMS6 1093 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 AGTPBP1Q9UPW5 1226 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 TMX2Q9Y320 296 aa12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 COL11A1P12107 1806 aaPredicted RBP12.37□□□□□ -0.43
CYCSP55-201ENST00000399027 RANBP6O60518 1105 aaKnown RBP12.36□□□□□ -0.43
CYCSP55-201ENST00000399027 HSPA1AP0DMV8 641 aaKnown RBP12.36□□□□□ -0.43
CYCSP55-201ENST00000399027 HSPA1BP0DMV9 641 aaKnown RBP12.36□□□□□ -0.43
CYCSP55-201ENST00000399027 EEF2P13639 858 aaKnown RBP12.36□□□□□ -0.43
CYCSP55-201ENST00000399027 CLEC10AQ8IUN9 316 aa12.36□□□□□ -0.43
CYCSP55-201ENST00000399027 NKX2-3Q8TAU0 364 aa12.36□□□□□ -0.43
CYCSP55-201ENST00000399027 MKL1Q969V6 931 aa12.36□□□□□ -0.43
CYCSP55-201ENST00000399027 CEP95Q96GE4 821 aa12.36□□□□□ -0.43
CYCSP55-201ENST00000399027 BEGAINQ9BUH8 593 aa12.36□□□□□ -0.43
CYCSP55-201ENST00000399027 SH2D4AQ9H788 454 aa12.36□□□□□ -0.43
CYCSP55-201ENST00000399027 CNNM2Q9H8M5 875 aa12.36□□□□□ -0.43
CYCSP55-201ENST00000399027 IL17RBQ9NRM6 502 aa12.36□□□□□ -0.43
CYCSP55-201ENST00000399027 EMILIN3Q9NT22 766 aa12.36□□□□□ -0.43
CYCSP55-201ENST00000399027 MTMR4Q9NYA4 1195 aa12.36□□□□□ -0.43
CYCSP55-201ENST00000399027 PDHXO00330 501 aa12.35□□□□□ -0.43
CYCSP55-201ENST00000399027 REC8O95072 547 aa12.35□□□□□ -0.43
CYCSP55-201ENST00000399027 DGKZQ13574 1117 aa12.35□□□□□ -0.43
CYCSP55-201ENST00000399027 NOM1Q5C9Z4 860 aaKnown RBP12.35□□□□□ -0.43
CYCSP55-201ENST00000399027 RRP12Q5JTH9 1297 aaKnown RBP12.35□□□□□ -0.43
CYCSP55-201ENST00000399027 PPP4R3BQ5MIZ7 849 aa12.35□□□□□ -0.43
CYCSP55-201ENST00000399027 TREML2Q5T2D2 321 aa12.35□□□□□ -0.43
CYCSP55-201ENST00000399027 SAMD1Q6SPF0 538 aaPredicted RBP12.35□□□□□ -0.43
CYCSP55-201ENST00000399027 GADL1Q6ZQY3 521 aa12.35□□□□□ -0.43
CYCSP55-201ENST00000399027 ESR2Q92731 530 aa12.35□□□□□ -0.43
CYCSP55-201ENST00000399027 FEZ1Q99689 392 aa12.35□□□□□ -0.43
CYCSP55-201ENST00000399027 KRT23Q9C075 422 aa12.35□□□□□ -0.43
CYCSP55-201ENST00000399027 TMOD4Q9NZQ9 345 aa12.35□□□□□ -0.43
CYCSP55-201ENST00000399027 B4E1Z4 1266 aa12.34□□□□□ -0.43
CYCSP55-201ENST00000399027 E7EWF7 191 aa12.34□□□□□ -0.43
CYCSP55-201ENST00000399027 SLC27A2O14975 620 aa12.34□□□□□ -0.43
CYCSP55-201ENST00000399027 FOXN1O15353 648 aa12.34□□□□□ -0.43
CYCSP55-201ENST00000399027 TRPA1O75762 1119 aa12.34□□□□□ -0.43
CYCSP55-201ENST00000399027 TTLL1O95922 423 aa12.34□□□□□ -0.43
CYCSP55-201ENST00000399027 HOXA7P31268 230 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms