RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 CHMP4CQ96CF2 233 aa19.5■□□□□ 0.71
CDH23-204ENST00000398792 KAT14Q9H8E8 782 aa19.5■□□□□ 0.71
CDH23-204ENST00000398792 STX8Q9UNK0 236 aa19.5■□□□□ 0.71
CDH23-204ENST00000398792 SMC3Q9UQE7 1217 aa19.5■□□□□ 0.71
CDH23-204ENST00000398792 NSUN7Q8NE18 718 aaKnown RBP19.49■□□□□ 0.71
CDH23-204ENST00000398792 LLPHQ9BRT6 129 aaKnown RBP19.49■□□□□ 0.71
CDH23-204ENST00000398792 MTMR4Q9NYA4 1195 aa19.49■□□□□ 0.71
CDH23-204ENST00000398792 GDF11O95390 407 aa19.48■□□□□ 0.71
CDH23-204ENST00000398792 CTDNEP1O95476 244 aa19.48■□□□□ 0.71
CDH23-204ENST00000398792 TROAPQ12815 778 aa19.48■□□□□ 0.71
CDH23-204ENST00000398792 RRP1BQ14684 758 aaKnown RBP19.48■□□□□ 0.71
CDH23-204ENST00000398792 SHROOM1Q2M3G4 852 aaPredicted RBP19.48■□□□□ 0.71
CDH23-204ENST00000398792 CCDC144CPQ8IYA2 1237 aa19.48■□□□□ 0.71
CDH23-204ENST00000398792 CIZ1Q9ULV3 898 aaPredicted RBP19.48■□□□□ 0.71
CDH23-204ENST00000398792 SSC5DA1L4H1 1573 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 DHX16O60231 1041 aaKnown RBP19.47■□□□□ 0.71
CDH23-204ENST00000398792 CALM1P0DP23 149 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 CALM2P0DP24 149 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 CALM3P0DP25 149 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 GJB2P29033 226 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 CDC27P30260 824 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 ABCB5Q2M3G0 1257 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 TMEM179Q6ZVK1 233 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 MIGA2Q7L4E1 593 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 CLEC10AQ8IUN9 316 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 PNMA1Q8ND90 353 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 SMARCC2Q8TAQ2 1214 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 NUP133Q8WUM0 1156 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 TMEM47Q9BQJ4 181 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 TAF1DQ9H5J8 278 aaPredicted RBP19.47■□□□□ 0.71
CDH23-204ENST00000398792 PTPDC1A2A3K4 754 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 DCAF8L1A6NGE4 600 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 POTECB2RU33 542 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 JAK2O60674 1132 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 DTNBO60941 627 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 TOP1P11387 765 aaKnown RBP19.47■□□□□ 0.71
CDH23-204ENST00000398792 RTN1Q16799 776 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 PPP4R3BQ5MIZ7 849 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 NBPF12Q5TAG4 269 aaPredicted RBP19.47■□□□□ 0.71
CDH23-204ENST00000398792 FAM217BQ9NTX9 383 aaPredicted RBP19.47■□□□□ 0.71
CDH23-204ENST00000398792 CHMP5Q9NZZ3 219 aa19.47■□□□□ 0.71
CDH23-204ENST00000398792 ATAD5Q96QE3 1844 aa19.46■□□□□ 0.71
CDH23-204ENST00000398792 CPLX1O14810 134 aa19.46■□□□□ 0.71
CDH23-204ENST00000398792 TTLL1O95922 423 aa19.46■□□□□ 0.71
CDH23-204ENST00000398792 GUCY1A2P33402 732 aa19.46■□□□□ 0.71
CDH23-204ENST00000398792 FANCBQ8NB91 859 aa19.46■□□□□ 0.71
CDH23-204ENST00000398792 ZC3H15Q8WU90 426 aaKnown RBP19.46■□□□□ 0.71
CDH23-204ENST00000398792 DCPSQ96C86 337 aaKnown RBP19.46■□□□□ 0.71
CDH23-204ENST00000398792 MYH4Q9Y623 1939 aa19.45■□□□□ 0.7
CDH23-204ENST00000398792 GH2P01242 217 aa19.45■□□□□ 0.7
CDH23-204ENST00000398792 ADD1P35611 737 aaKnown RBP19.45■□□□□ 0.7
CDH23-204ENST00000398792 JAG1P78504 1218 aa19.45■□□□□ 0.7
CDH23-204ENST00000398792 SEPT2Q15019 361 aa19.45■□□□□ 0.7
CDH23-204ENST00000398792 PPP2R5BQ15173 497 aa19.45■□□□□ 0.7
CDH23-204ENST00000398792 HOOK2Q96ED9 719 aa19.45■□□□□ 0.7
CDH23-204ENST00000398792 CABP5Q9NP86 173 aa19.45■□□□□ 0.7
CDH23-204ENST00000398792 CCDC196A0A1B0GTZ2 297 aa19.44■□□□□ 0.7
CDH23-204ENST00000398792 HMGN5P82970 282 aaKnown RBP19.44■□□□□ 0.7
CDH23-204ENST00000398792 ICA1Q05084 483 aa19.44■□□□□ 0.7
CDH23-204ENST00000398792 DCAF15Q66K64 600 aa19.44■□□□□ 0.7
CDH23-204ENST00000398792 SULF1Q8IWU6 871 aa19.44■□□□□ 0.7
CDH23-204ENST00000398792 KANSL2Q9H9L4 492 aa19.44■□□□□ 0.7
CDH23-204ENST00000398792 RBM28Q9NW13 759 aaKnown RBP19.44■□□□□ 0.7
CDH23-204ENST00000398792 ZBTB21Q9ULJ3 1066 aa19.44■□□□□ 0.7
CDH23-204ENST00000398792 PHF20L1A8MW92 1017 aa19.43■□□□□ 0.7
CDH23-204ENST00000398792 CDKL5O76039 1030 aa19.43■□□□□ 0.7
CDH23-204ENST00000398792 CAP2P40123 477 aa19.43■□□□□ 0.7
CDH23-204ENST00000398792 NTRK3Q16288 839 aa19.43■□□□□ 0.7
CDH23-204ENST00000398792 PRAMEF18Q5VWM3 479 aa19.43■□□□□ 0.7
CDH23-204ENST00000398792 CPLX2Q6PUV4 134 aaKnown RBP19.43■□□□□ 0.7
CDH23-204ENST00000398792 PNMA8AQ86V59 439 aaPredicted RBP19.43■□□□□ 0.7
CDH23-204ENST00000398792 LRRC47Q8N1G4 583 aaKnown RBP19.43■□□□□ 0.7
CDH23-204ENST00000398792 CTCFLQ8NI51 663 aaPredicted RBP19.43■□□□□ 0.7
CDH23-204ENST00000398792 MAP3K14Q99558 947 aa19.43■□□□□ 0.7
CDH23-204ENST00000398792 NYAP2Q9P242 653 aa19.43■□□□□ 0.7
CDH23-204ENST00000398792 DOCK1Q14185 1865 aa19.43■□□□□ 0.7
CDH23-204ENST00000398792 POLR2AP24928 1970 aaKnown RBP19.43■□□□□ 0.7
CDH23-204ENST00000398792 ADM5C9JUS6 153 aa19.43■□□□□ 0.7
CDH23-204ENST00000398792 GRM4Q14833 912 aa19.43■□□□□ 0.7
CDH23-204ENST00000398792 RAB3GAP1Q15042 981 aa19.43■□□□□ 0.7
CDH23-204ENST00000398792 EAPPQ56P03 285 aaPredicted RBP19.43■□□□□ 0.7
CDH23-204ENST00000398792 DDX11Q96FC9 970 aa19.43■□□□□ 0.7
CDH23-204ENST00000398792 CLIP2Q9UDT6 1046 aa19.43■□□□□ 0.7
CDH23-204ENST00000398792 EEF2P13639 858 aaKnown RBP19.42■□□□□ 0.7
CDH23-204ENST00000398792 IFNAR1P17181 557 aa19.42■□□□□ 0.7
CDH23-204ENST00000398792 KRT26Q7Z3Y9 468 aa19.42■□□□□ 0.7
CDH23-204ENST00000398792 ZNF341Q9BYN7 854 aa19.42■□□□□ 0.7
CDH23-204ENST00000398792 PAPPA2Q9BXP8 1791 aa19.42■□□□□ 0.7
CDH23-204ENST00000398792 PPFIA3O75145 1194 aa19.41■□□□□ 0.7
CDH23-204ENST00000398792 KIF5BP33176 963 aa19.41■□□□□ 0.7
CDH23-204ENST00000398792 PKP1Q13835 747 aa19.41■□□□□ 0.7
CDH23-204ENST00000398792 SUPT20HL1Q3ZLR7 823 aa19.41■□□□□ 0.7
CDH23-204ENST00000398792 TMTC3Q6ZXV5 915 aa19.41■□□□□ 0.7
CDH23-204ENST00000398792 RASGRP2Q7LDG7 609 aa19.41■□□□□ 0.7
CDH23-204ENST00000398792 STK36Q9NRP7 1315 aa19.41■□□□□ 0.7
CDH23-204ENST00000398792 PLEKHA8P1O95397 391 aa19.4■□□□□ 0.7
CDH23-204ENST00000398792 ASNSP08243 561 aa19.4■□□□□ 0.7
CDH23-204ENST00000398792 NUCB2P80303 420 aa19.4■□□□□ 0.7
CDH23-204ENST00000398792 ATP2B2Q01814 1243 aa19.4■□□□□ 0.7
CDH23-204ENST00000398792 SIAH1Q8IUQ4 282 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms