RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 PPP2R3AQ06190 1150 aa4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 RASGRF1Q13972 1273 aa4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 MAP7Q14244 749 aa4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 FAM50AQ14320 339 aaKnown RBP4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 CPSF6Q16630 551 aaKnown RBP eCLIP4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 TKFCQ3LXA3 575 aa4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 C2orf27AQ580R0 203 aa4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 BRDTQ58F21 947 aaPredicted RBP4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 NXPE4Q6UWF7 544 aa4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 C11orf96Q7Z7L8 435 aa4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 ZAR1Q86SH2 424 aa4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 RAVER1Q8IY67 606 aaKnown RBP4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 CELF2-AS1Q8N7Q2 184 aa4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 CPLX3Q8WVH0 158 aa4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 TSR2Q969E8 191 aaKnown RBP4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 ANAPC16Q96DE5 110 aa4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 EAF1Q96JC9 268 aaPredicted RBP4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 METTL22Q9BUU2 404 aaPredicted RBP4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 SEMA6CQ9H3T2 930 aa4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 GSX1Q9H4S2 264 aaPredicted RBP4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 CCDC86Q9H6F5 360 aaKnown RBP4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 ACSS3Q9H6R3 686 aa4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 TMEM39AQ9NV64 488 aa4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 GNL3LQ9NVN8 582 aaKnown RBP4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 GPN3Q9UHW5 284 aaPredicted RBP4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 PPP1R9AQ9ULJ8 1098 aa4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 PLAAQ9Y263 795 aa4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 ATP8A1Q9Y2Q0 1164 aa4.25□□□□□ -1.73
RPS4XP3-201ENST00000398541 SYNGAP1Q96PV0 1343 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 FAM170BA6NMN3 283 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 SMAD7O15105 426 aaKnown RBP4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 PDPK1O15530 556 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 KCNQ2O43526 872 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 TSPAN6O43657 245 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 CAND2O75155 1236 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 GSTP1P09211 210 aaKnown RBP4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 FOSL1P15407 271 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 EIF4A3P38919 411 aaKnown RBP4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 EPHB1P54762 984 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 GP2P55259 537 aaKnown RBP4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 EVA1CP58658 441 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 OS9Q13438 667 aaPredicted RBP4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 HDAC1Q13547 482 aaPredicted RBP4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 TCEA2Q15560 299 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 NFE2Q16621 373 aaPredicted RBP4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 DDR2Q16832 855 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 PCNX4Q63HM2 1172 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 CLEC4GQ6UXB4 293 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 WDR75Q8IWA0 830 aaKnown RBP4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 TMTC2Q8N394 836 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 SYNPOQ8N3V7 929 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 WDR89Q96FK6 387 aaPredicted RBP4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 APBA2Q99767 749 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 NT5C1AQ9BXI3 368 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 SRRTQ9BXP5 876 aaKnown RBP4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 KCNQ5Q9NR82 932 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 PNMA2Q9UL42 364 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 AKAP2Q9Y2D5 859 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 DAGLAQ9Y4D2 1042 aa4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 OAS3Q9Y6K5 1087 aaKnown RBP4.24□□□□□ -1.73
RPS4XP3-201ENST00000398541 ALG1L2C9J202 215 aa4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 DYNC1LI2O43237 492 aaPredicted RBP4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 WNT11O96014 354 aa4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 SLFN14P0C7P3 912 aa4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 POU3F3P20264 500 aaPredicted RBP4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 PMLP29590 882 aa4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 HNRNPUQ00839 825 aaKnown RBP eCLIP4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 SAFB2Q14151 953 aaKnown RBP eCLIP4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 DALRD3Q5D0E6 543 aaKnown RBP4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 JAMLQ86YT9 394 aa4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 RELL1Q8IUW5 271 aa4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 SAMD3Q8N6K7 520 aa4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 JMYQ8N9B5 988 aa4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 THAP3Q8WTV1 239 aaPredicted RBP4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 ZNF296Q8WUU4 475 aaPredicted RBP4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 GATA6Q92908 595 aa4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 IL17RAQ96F46 866 aa4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 SLC39A13Q96H72 371 aa4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 SHDQ96IW2 340 aa4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 SCYL1Q96KG9 808 aa4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 TMEM74Q96NL1 305 aa4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 LGR6Q9HBX8 967 aa4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 KRT82Q9NSB4 513 aa4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 CRIM1Q9NZV1 1036 aa4.23□□□□□ -1.73
RPS4XP3-201ENST00000398541 CCDC189A1A4V9 331 aa4.22□□□□□ -1.73
RPS4XP3-201ENST00000398541 MINDY4BA8MYZ0 360 aa4.22□□□□□ -1.73
RPS4XP3-201ENST00000398541 TMPRSS2O15393 492 aa4.22□□□□□ -1.73
RPS4XP3-201ENST00000398541 CYP26A1O43174 497 aa4.22□□□□□ -1.73
RPS4XP3-201ENST00000398541 ZNF862O60290 1169 aa4.22□□□□□ -1.73
RPS4XP3-201ENST00000398541 WDHD1O75717 1129 aaPredicted RBP4.22□□□□□ -1.73
RPS4XP3-201ENST00000398541 ALDH1L1O75891 902 aa4.22□□□□□ -1.73
RPS4XP3-201ENST00000398541 LDHAP00338 332 aaKnown RBP4.22□□□□□ -1.73
RPS4XP3-201ENST00000398541 KRT18P05783 430 aaKnown RBP4.22□□□□□ -1.73
RPS4XP3-201ENST00000398541 CNGA1P29973 690 aa4.22□□□□□ -1.73
RPS4XP3-201ENST00000398541 GBP2P32456 591 aaPredicted RBP4.22□□□□□ -1.73
RPS4XP3-201ENST00000398541 CYP27A1Q02318 531 aa4.22□□□□□ -1.73
RPS4XP3-201ENST00000398541 ID3Q02535 119 aa4.22□□□□□ -1.73
RPS4XP3-201ENST00000398541 HLTFQ14527 1009 aaKnown RBP eCLIP4.22□□□□□ -1.73
RPS4XP3-201ENST00000398541 DHX8Q14562 1220 aaKnown RBP4.22□□□□□ -1.73
RPS4XP3-201ENST00000398541 PPP2R5AQ15172 486 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms