RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 PSMA5P28066 241 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 RFC4P35249 363 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 CABP4P57796 275 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 PDIA5Q14554 519 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 RC3H1Q5TC82 1133 aaKnown RBP12.25□□□□□ -0.45
MSL3-207ENST00000398527 ANKRD13DQ6ZTN6 518 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 TMEM110Q86TL2 294 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 RASEFQ8IZ41 740 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 GABPB2Q8TAK5 448 aaPredicted RBP12.25□□□□□ -0.45
MSL3-207ENST00000398527 SUCLG2Q96I99 432 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 TRPV5Q9NQA5 729 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 CYP46A1Q9Y6A2 500 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 ZSCAN9O15535 394 aaPredicted RBP12.25□□□□□ -0.45
MSL3-207ENST00000398527 SASH1O94885 1247 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 ZKSCAN1P17029 563 aaPredicted RBP12.25□□□□□ -0.45
MSL3-207ENST00000398527 KCTD2Q14681 263 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 ANKRD1Q15327 319 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 ARMC3Q5W041 872 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 RIC3Q7Z5B4 369 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 GIMAP1Q8WWP7 306 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 CEP89Q96ST8 783 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 TMOD3Q9NYL9 352 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 SFMBT1Q9UHJ3 866 aa12.25□□□□□ -0.45
MSL3-207ENST00000398527 COL5A3P25940 1745 aaPredicted RBP12.25□□□□□ -0.45
MSL3-207ENST00000398527 ARFGEF2Q9Y6D5 1785 aa12.24□□□□□ -0.45
MSL3-207ENST00000398527 CCDC88AQ3V6T2 1871 aa12.24□□□□□ -0.45
MSL3-207ENST00000398527 PABPN1LA6NDY0 278 aaKnown RBP12.24□□□□□ -0.45
MSL3-207ENST00000398527 NEURL1BA8MQ27 555 aa12.24□□□□□ -0.45
MSL3-207ENST00000398527 STX6O43752 255 aa12.24□□□□□ -0.45
MSL3-207ENST00000398527 UBE2HP62256 183 aa12.24□□□□□ -0.45
MSL3-207ENST00000398527 CWF19L2Q2TBE0 894 aaKnown RBP12.24□□□□□ -0.45
MSL3-207ENST00000398527 RABL6Q3YEC7 729 aaPredicted RBP12.24□□□□□ -0.45
MSL3-207ENST00000398527 TTC31Q49AM3 519 aaPredicted RBP12.24□□□□□ -0.45
MSL3-207ENST00000398527 FAAH2Q6GMR7 532 aa12.24□□□□□ -0.45
MSL3-207ENST00000398527 DPY19L2Q6NUT2 758 aa12.24□□□□□ -0.45
MSL3-207ENST00000398527 CWC27Q6UX04 472 aaKnown RBP12.24□□□□□ -0.45
MSL3-207ENST00000398527 LRP10Q7Z4F1 713 aa12.24□□□□□ -0.45
MSL3-207ENST00000398527 TACO1Q9BSH4 297 aaKnown RBP12.24□□□□□ -0.45
MSL3-207ENST00000398527 TSPY26PQ9H489 355 aa12.24□□□□□ -0.45
MSL3-207ENST00000398527 COMMD8Q9NX08 183 aa12.24□□□□□ -0.45
MSL3-207ENST00000398527 SPATA7Q9P0W8 599 aa12.24□□□□□ -0.45
MSL3-207ENST00000398527 ERVV-2B6SEH9 535 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 NEBLO76041 1014 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 IGKV5-2P06315 115 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 U2AF2P26368 475 aaKnown RBP eCLIP12.23□□□□□ -0.45
MSL3-207ENST00000398527 DDR1Q08345 913 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 E2F4Q16254 413 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 RNF20Q5VTR2 975 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 AACSQ86V21 672 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 XAGE3Q8WTP9 111 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 NACC2Q96BF6 587 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 CENPTQ96BT3 561 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 FAM81BQ96LP2 452 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 SLC7A5P2Q9GIP4 190 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 LMCD1Q9NZU5 365 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 SLC45A1Q9Y2W3 748 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 CNTNAP4Q9C0A0 1308 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 TCHHQ07283 1943 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 AFDNP55196 1824 aaKnown RBP12.23□□□□□ -0.45
MSL3-207ENST00000398527 MYO1CO00159 1063 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 RPS6KA4O75676 772 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 F13A1P00488 732 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 TBC1D8BQ0IIM8 1120 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 AIMP1Q12904 312 aaKnown RBP12.23□□□□□ -0.45
MSL3-207ENST00000398527 GCKRQ14397 625 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 RBBP5Q15291 538 aaKnown RBP12.23□□□□□ -0.45
MSL3-207ENST00000398527 PTPROQ16827 1216 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.23□□□□□ -0.45
MSL3-207ENST00000398527 MUM1L1Q5H9M0 696 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 CCDC183Q5T5S1 534 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 ZCCHC8Q6NZY4 707 aaKnown RBP12.23□□□□□ -0.45
MSL3-207ENST00000398527 LCA5Q86VQ0 697 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 C10orf67Q8IYJ2 551 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 BICC1Q9H694 974 aaKnown RBP12.23□□□□□ -0.45
MSL3-207ENST00000398527 PDRG1Q9NUG6 133 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 SERPINA10Q9UK55 444 aa12.23□□□□□ -0.45
MSL3-207ENST00000398527 TMEM88BA6NKF7 163 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 BBOX1O75936 387 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 POTEIP0CG38 1075 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 POTEJP0CG39 1038 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 SYT1P21579 422 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 TPP2P29144 1249 aaPredicted RBP12.22□□□□□ -0.45
MSL3-207ENST00000398527 CA8P35219 290 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 TBX4P57082 545 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 PPP2R5BQ15173 497 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 AGAP9Q5VTM2 703 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 USPL1Q5W0Q7 1092 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 COPS6Q7L5N1 327 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 NT5DC4Q86YG4 428 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 EAF2Q96CJ1 260 aaPredicted RBP12.22□□□□□ -0.45
MSL3-207ENST00000398527 SPACA7Q96KW9 195 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 ATG3Q9NT62 314 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 CCDC39Q9UFE4 941 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 DLEC1Q9Y238 1755 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 SPEF2Q9C093 1822 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 SYCE3A1L190 88 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 ATP5JP18859 108 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 CASTP20810 708 aaKnown RBP12.22□□□□□ -0.45
MSL3-207ENST00000398527 USP48Q86UV5 1035 aa12.22□□□□□ -0.45
MSL3-207ENST00000398527 NSFL1CQ9UNZ2 370 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms