RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 CCL14Q16627 93 aa14.55□□□□□ -0.08
SYNE4-203ENST00000397428 LBX2Q6XYB7 198 aa14.55□□□□□ -0.08
SYNE4-203ENST00000397428 MAGEB6Q8N7X4 407 aa14.55□□□□□ -0.08
SYNE4-203ENST00000397428 MIGA1Q8NAN2 632 aa14.55□□□□□ -0.08
SYNE4-203ENST00000397428 EDC3Q96F86 508 aaKnown RBP14.55□□□□□ -0.08
SYNE4-203ENST00000397428 ZMYND8Q9ULU4 1186 aaPredicted RBP14.55□□□□□ -0.08
SYNE4-203ENST00000397428 PFASO15067 1338 aa14.55□□□□□ -0.08
SYNE4-203ENST00000397428 IGHA2P01877 340 aa14.54□□□□□ -0.08
SYNE4-203ENST00000397428 ZKSCAN1P17029 563 aaPredicted RBP14.54□□□□□ -0.08
SYNE4-203ENST00000397428 CCND3P30281 292 aaPredicted RBP14.54□□□□□ -0.08
SYNE4-203ENST00000397428 GUCY1A2P33402 732 aa14.54□□□□□ -0.08
SYNE4-203ENST00000397428 PLCD1P51178 756 aa14.54□□□□□ -0.08
SYNE4-203ENST00000397428 USP14P54578 494 aa14.54□□□□□ -0.08
SYNE4-203ENST00000397428 MAP2K5Q13163 448 aa14.54□□□□□ -0.08
SYNE4-203ENST00000397428 CERKLQ49MI3 558 aaPredicted RBP14.54□□□□□ -0.08
SYNE4-203ENST00000397428 CCAR1Q8IX12 1150 aaKnown RBP14.54□□□□□ -0.08
SYNE4-203ENST00000397428 ACER1Q8TDN7 264 aa14.54□□□□□ -0.08
SYNE4-203ENST00000397428 RIOK1Q9BRS2 568 aaKnown RBP14.54□□□□□ -0.08
SYNE4-203ENST00000397428 PAGR1Q9BTK6 254 aa14.54□□□□□ -0.08
SYNE4-203ENST00000397428 NDUFB9Q9Y6M9 179 aa14.54□□□□□ -0.08
SYNE4-203ENST00000397428 DDX60LQ5H9U9 1706 aaKnown RBP14.54□□□□□ -0.08
SYNE4-203ENST00000397428 MYH1P12882 1939 aa14.53□□□□□ -0.08
SYNE4-203ENST00000397428 SLC15A5A6NIM6 579 aa14.53□□□□□ -0.08
SYNE4-203ENST00000397428 GLRX3O76003 335 aaKnown RBP14.53□□□□□ -0.08
SYNE4-203ENST00000397428 HOXC6P09630 235 aa14.53□□□□□ -0.08
SYNE4-203ENST00000397428 SYN1P17600 705 aa14.53□□□□□ -0.08
SYNE4-203ENST00000397428 PTPREP23469 700 aa14.53□□□□□ -0.08
SYNE4-203ENST00000397428 SHMT1P34896 483 aa14.53□□□□□ -0.08
SYNE4-203ENST00000397428 CCNA1P78396 465 aa14.53□□□□□ -0.08
SYNE4-203ENST00000397428 ABCB5Q2M3G0 1257 aa14.53□□□□□ -0.08
SYNE4-203ENST00000397428 LRIT3Q3SXY7 679 aa14.53□□□□□ -0.08
SYNE4-203ENST00000397428 CEP85Q6P2H3 762 aa14.53□□□□□ -0.08
SYNE4-203ENST00000397428 APBA2Q99767 749 aa14.53□□□□□ -0.08
SYNE4-203ENST00000397428 DNAH12Q6ZR08 3092 aa14.52□□□□□ -0.08
SYNE4-203ENST00000397428 MAGEA10P43363 369 aaPredicted RBP14.52□□□□□ -0.09
SYNE4-203ENST00000397428 GABPAQ06546 454 aa14.52□□□□□ -0.09
SYNE4-203ENST00000397428 ITPRIPQ8IWB1 547 aa14.52□□□□□ -0.09
SYNE4-203ENST00000397428 SLC17A8Q8NDX2 589 aa14.52□□□□□ -0.09
SYNE4-203ENST00000397428 FLRT1Q9NZU1 646 aa14.52□□□□□ -0.09
SYNE4-203ENST00000397428 BTBD7Q9P203 1132 aa14.52□□□□□ -0.09
SYNE4-203ENST00000397428 VCAM1P19320 739 aa14.51□□□□□ -0.09
SYNE4-203ENST00000397428 RAB3GAP1Q15042 981 aa14.51□□□□□ -0.09
SYNE4-203ENST00000397428 ZYXQ15942 572 aaKnown RBP14.51□□□□□ -0.09
SYNE4-203ENST00000397428 LRRC26Q2I0M4 334 aa14.51□□□□□ -0.09
SYNE4-203ENST00000397428 AACSQ86V21 672 aa14.51□□□□□ -0.09
SYNE4-203ENST00000397428 ERC1Q8IUD2 1116 aa14.51□□□□□ -0.09
SYNE4-203ENST00000397428 FTSJ3Q8IY81 847 aaKnown RBP14.51□□□□□ -0.09
SYNE4-203ENST00000397428 FEZ1Q99689 392 aa14.51□□□□□ -0.09
SYNE4-203ENST00000397428 CABP5Q9NP86 173 aa14.51□□□□□ -0.09
SYNE4-203ENST00000397428 COL6A3P12111 3177 aa14.51□□□□□ -0.09
SYNE4-203ENST00000397428 MAGEB6P1A0A0J9YX57 407 aa14.5□□□□□ -0.09
SYNE4-203ENST00000397428 A0A1W2PRG0 241 aa14.5□□□□□ -0.09
SYNE4-203ENST00000397428 COG2Q14746 738 aa14.5□□□□□ -0.09
SYNE4-203ENST00000397428 TTF1Q15361 905 aaPredicted RBP14.5□□□□□ -0.09
SYNE4-203ENST00000397428 MFSD14CQ5VZR4 134 aa14.5□□□□□ -0.09
SYNE4-203ENST00000397428 TDHQ8IZJ6 230 aa14.5□□□□□ -0.09
SYNE4-203ENST00000397428 NPLOC4Q8TAT6 608 aa14.5□□□□□ -0.09
SYNE4-203ENST00000397428 HOXC10Q9NYD6 342 aa14.5□□□□□ -0.09
SYNE4-203ENST00000397428 EXOC6BQ9Y2D4 811 aa14.5□□□□□ -0.09
SYNE4-203ENST00000397428 SPDYE16A6NNV3 312 aaPredicted RBP14.49□□□□□ -0.09
SYNE4-203ENST00000397428 STRNO43815 780 aa14.49□□□□□ -0.09
SYNE4-203ENST00000397428 POLR3DP05423 398 aaPredicted RBP14.49□□□□□ -0.09
SYNE4-203ENST00000397428 ATP2B2Q01814 1243 aa14.49□□□□□ -0.09
SYNE4-203ENST00000397428 GRB14Q14449 540 aa14.49□□□□□ -0.09
SYNE4-203ENST00000397428 SEPT2Q15019 361 aa14.49□□□□□ -0.09
SYNE4-203ENST00000397428 HSP90AB4PQ58FF6 505 aa14.49□□□□□ -0.09
SYNE4-203ENST00000397428 SLC9C2Q5TAH2 1124 aa14.49□□□□□ -0.09
SYNE4-203ENST00000397428 SIAH1Q8IUQ4 282 aa14.49□□□□□ -0.09
SYNE4-203ENST00000397428 RHPN1Q8TCX5 695 aa14.49□□□□□ -0.09
SYNE4-203ENST00000397428 UBE2OQ9C0C9 1292 aaKnown RBP14.49□□□□□ -0.09
SYNE4-203ENST00000397428 RPAP3Q9H6T3 665 aaPredicted RBP14.49□□□□□ -0.09
SYNE4-203ENST00000397428 TCRBV5S4A2TA0A5A2 114 aa14.48□□□□□ -0.09
SYNE4-203ENST00000397428 DLL1O00548 723 aa14.48□□□□□ -0.09
SYNE4-203ENST00000397428 PDE6AP16499 860 aa14.48□□□□□ -0.09
SYNE4-203ENST00000397428 DEFB123Q8N688 67 aa14.48□□□□□ -0.09
SYNE4-203ENST00000397428 TRPV1Q8NER1 839 aa14.48□□□□□ -0.09
SYNE4-203ENST00000397428 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.48□□□□□ -0.09
SYNE4-203ENST00000397428 LPAR1Q92633 364 aa14.48□□□□□ -0.09
SYNE4-203ENST00000397428 CWC22Q9HCG8 908 aaKnown RBP14.48□□□□□ -0.09
SYNE4-203ENST00000397428 IL1RAPL2Q9NP60 686 aa14.48□□□□□ -0.09
SYNE4-203ENST00000397428 DDX20Q9UHI6 824 aaKnown RBP14.48□□□□□ -0.09
SYNE4-203ENST00000397428 A0A0C4DFX4 3053 aa14.47□□□□□ -0.09
SYNE4-203ENST00000397428 MSCO60682 206 aa14.47□□□□□ -0.09
SYNE4-203ENST00000397428 EVX2Q03828 476 aa14.47□□□□□ -0.09
SYNE4-203ENST00000397428 PANK1Q8TE04 598 aa14.47□□□□□ -0.09
SYNE4-203ENST00000397428 MOV10L1Q9BXT6 1211 aaKnown RBP14.47□□□□□ -0.09
SYNE4-203ENST00000397428 CRNKL1Q9BZJ0 848 aaKnown RBP14.47□□□□□ -0.09
SYNE4-203ENST00000397428 SENP6Q9GZR1 1112 aaPredicted RBP14.47□□□□□ -0.09
SYNE4-203ENST00000397428 DCP1AQ9NPI6 582 aaPredicted RBP14.47□□□□□ -0.09
SYNE4-203ENST00000397428 MTMR10Q9NXD2 777 aa14.47□□□□□ -0.09
SYNE4-203ENST00000397428 MCM9Q9NXL9 1143 aa14.47□□□□□ -0.09
SYNE4-203ENST00000397428 IVNS1ABPQ9Y6Y0 642 aa14.47□□□□□ -0.09
SYNE4-203ENST00000397428 ZNF532Q9HCE3 1301 aa14.46□□□□□ -0.09
SYNE4-203ENST00000397428 CYP2C19P33261 490 aa14.46□□□□□ -0.09
SYNE4-203ENST00000397428 HNRNPUQ00839 825 aaKnown RBP eCLIP14.46□□□□□ -0.09
SYNE4-203ENST00000397428 KIAA1755Q5JYT7 1200 aa14.46□□□□□ -0.09
SYNE4-203ENST00000397428 WDR78Q5VTH9 848 aa14.46□□□□□ -0.09
SYNE4-203ENST00000397428 OLFML2BQ68BL8 750 aa14.46□□□□□ -0.09
SYNE4-203ENST00000397428 RPAP2Q8IXW5 612 aaPredicted RBP14.46□□□□□ -0.09
SYNE4-203ENST00000397428 SHCBP1Q8NEM2 672 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms