RNA–Protein interactions for RNA: ENST00000397033.6

ITGA4-203, Transcript of integrin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA4, Length 4,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-203ENST00000397033 MYL5Q02045 173 aa13.77□□□□□ -0.21
ITGA4-203ENST00000397033 ZNF569Q5MCW4 686 aa13.77□□□□□ -0.21
ITGA4-203ENST00000397033 ZSCAN10Q96SZ4 725 aaPredicted RBP13.77□□□□□ -0.21
ITGA4-203ENST00000397033 FANCLQ9NW38 375 aa13.77□□□□□ -0.21
ITGA4-203ENST00000397033 ZMYM6O95789 1325 aa13.77□□□□□ -0.21
ITGA4-203ENST00000397033 FRMPD2Q68DX3 1309 aaPredicted RBP13.77□□□□□ -0.21
ITGA4-203ENST00000397033 ASIC1P78348 528 aa13.77□□□□□ -0.21
ITGA4-203ENST00000397033 RILPL1Q5EBL4 403 aa13.77□□□□□ -0.21
ITGA4-203ENST00000397033 ZNHIT6Q9NWK9 470 aaKnown RBP13.77□□□□□ -0.21
ITGA4-203ENST00000397033 USP17L3A6NCW0 530 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 USP17L4A6NCW7 530 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 KIF28PB7ZC32 967 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 SMIM22K7EJ46 135 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 USP17L1Q7RTZ2 530 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 KIAA0825Q8IV33 1275 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 LRRC47Q8N1G4 583 aaKnown RBP13.76□□□□□ -0.21
ITGA4-203ENST00000397033 VEZTQ9HBM0 779 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 GGA1Q9UJY5 639 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 PCDHB6Q9Y5E3 794 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 SH2B2O14492 632 aaPredicted RBP13.76□□□□□ -0.21
ITGA4-203ENST00000397033 OXER1Q8TDS5 423 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 GDAP1L1Q96MZ0 367 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 CENPHQ9H3R5 247 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 RCOR1Q9UKL0 485 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 UBN2Q6ZU65 1347 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 TXKP42681 527 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 TTC38Q5R3I4 469 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 KIAA1328Q86T90 577 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 MMRN2Q9H8L6 949 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 IMPACTQ9P2X3 320 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 MINPP1Q9UNW1 487 aa13.76□□□□□ -0.21
ITGA4-203ENST00000397033 KLRK1P26718 216 aa13.75□□□□□ -0.21
ITGA4-203ENST00000397033 MECOMQ03112 1051 aa13.75□□□□□ -0.21
ITGA4-203ENST00000397033 WDHD1O75717 1129 aaPredicted RBP13.75□□□□□ -0.21
ITGA4-203ENST00000397033 CTDNEP1O95476 244 aa13.75□□□□□ -0.21
ITGA4-203ENST00000397033 ARID5AQ03989 594 aa13.75□□□□□ -0.21
ITGA4-203ENST00000397033 USP32Q8NFA0 1604 aa13.75□□□□□ -0.21
ITGA4-203ENST00000397033 ECM2O94769 699 aaPredicted RBP13.75□□□□□ -0.21
ITGA4-203ENST00000397033 PTF1AQ7RTS3 328 aa13.75□□□□□ -0.21
ITGA4-203ENST00000397033 MICALL1Q8N3F8 863 aa13.75□□□□□ -0.21
ITGA4-203ENST00000397033 TMEM51Q9NW97 253 aa13.75□□□□□ -0.21
ITGA4-203ENST00000397033 CACNB3P54284 484 aa13.75□□□□□ -0.21
ITGA4-203ENST00000397033 INF2Q27J81 1249 aa13.75□□□□□ -0.21
ITGA4-203ENST00000397033 PNMA1Q8ND90 353 aa13.75□□□□□ -0.21
ITGA4-203ENST00000397033 SLC4A9Q96Q91 983 aa13.75□□□□□ -0.21
ITGA4-203ENST00000397033 CTNND2Q9UQB3 1225 aa13.75□□□□□ -0.21
ITGA4-203ENST00000397033 USP42Q9H9J4 1324 aaKnown RBP13.74□□□□□ -0.21
ITGA4-203ENST00000397033 GOLGA6L9A6NEM1 432 aa13.74□□□□□ -0.21
ITGA4-203ENST00000397033 FAM205CA6NFA0 338 aa13.74□□□□□ -0.21
ITGA4-203ENST00000397033 FOXN1O15353 648 aa13.74□□□□□ -0.21
ITGA4-203ENST00000397033 YEATS4O95619 227 aa13.74□□□□□ -0.21
ITGA4-203ENST00000397033 DTHD1Q6ZMT9 781 aa13.74□□□□□ -0.21
ITGA4-203ENST00000397033 EPSTI1Q96J88 318 aa13.74□□□□□ -0.21
ITGA4-203ENST00000397033 PKD2L1Q9P0L9 805 aa13.74□□□□□ -0.21
ITGA4-203ENST00000397033 GSG1L2A8MUP6 293 aa13.74□□□□□ -0.21
ITGA4-203ENST00000397033 ERVV-1B6SEH8 477 aa13.74□□□□□ -0.21
ITGA4-203ENST00000397033 POSTNQ15063 836 aa13.74□□□□□ -0.21
ITGA4-203ENST00000397033 TCERG1LQ5VWI1 586 aa13.74□□□□□ -0.21
ITGA4-203ENST00000397033 BMP2KQ9NSY1 1161 aaPredicted RBP13.74□□□□□ -0.21
ITGA4-203ENST00000397033 SEPT11Q9NVA2 429 aaKnown RBP13.74□□□□□ -0.21
ITGA4-203ENST00000397033 RTL9Q8NET4 1388 aa13.74□□□□□ -0.21
ITGA4-203ENST00000397033 CCNT1O60563 726 aaKnown RBP13.74□□□□□ -0.21
ITGA4-203ENST00000397033 CCDC175P0C221 793 aa13.74□□□□□ -0.21
ITGA4-203ENST00000397033 MATR3P43243 847 aaKnown RBP eCLIP13.74□□□□□ -0.21
ITGA4-203ENST00000397033 MNAT1P51948 309 aa13.74□□□□□ -0.21
ITGA4-203ENST00000397033 GSTO1P78417 241 aa13.74□□□□□ -0.21
ITGA4-203ENST00000397033 TTC31Q49AM3 519 aaPredicted RBP13.74□□□□□ -0.21
ITGA4-203ENST00000397033 DNAJC21Q5F1R6 531 aaKnown RBP13.74□□□□□ -0.21
ITGA4-203ENST00000397033 MB21D2Q8IYB1 491 aaPredicted RBP13.74□□□□□ -0.21
ITGA4-203ENST00000397033 GBP3Q9H0R5 595 aa13.74□□□□□ -0.21
ITGA4-203ENST00000397033 BIN2Q9UBW5 565 aaPredicted RBP13.74□□□□□ -0.21
ITGA4-203ENST00000397033 MED23Q9ULK4 1368 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 ANTXR2P58335 489 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 CHMP4BP1P59074 171 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 PTGDRQ13258 359 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 DYMQ7RTS9 669 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 CSRNP2Q9H175 543 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 CDC25BP30305 580 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 RBM6P78332 1123 aaKnown RBP13.73□□□□□ -0.21
ITGA4-203ENST00000397033 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.73□□□□□ -0.21
ITGA4-203ENST00000397033 PLEKHA4Q9H4M7 779 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 RTEL1Q9NZ71 1219 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 TMOD2Q9NZR1 351 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 TBC1D7Q9P0N9 293 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 TTF2Q9UNY4 1162 aaKnown RBP13.73□□□□□ -0.21
ITGA4-203ENST00000397033 UTYO14607 1347 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 CTAGE15A4D2H0 777 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 FAM196BA6NMK8 535 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 APBA3O96018 575 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 CTAGE8P0CG41 777 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 TRIM21P19474 475 aaKnown RBP13.73□□□□□ -0.21
ITGA4-203ENST00000397033 ARID4AP29374 1257 aaPredicted RBP13.73□□□□□ -0.21
ITGA4-203ENST00000397033 EXOSC10Q01780 885 aaKnown RBP13.73□□□□□ -0.21
ITGA4-203ENST00000397033 SF3B2Q13435 895 aaKnown RBP13.73□□□□□ -0.21
ITGA4-203ENST00000397033 TDRD12Q587J7 1177 aaKnown RBP13.73□□□□□ -0.21
ITGA4-203ENST00000397033 CTR9Q6PD62 1173 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 CTAGE6Q86UF2 777 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 CTAGE4Q8IX94 777 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 MST1RQ04912 1400 aa13.73□□□□□ -0.21
ITGA4-203ENST00000397033 HLA-DOAP06340 250 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms