RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 PFASO15067 1338 aa16.17■□□□□ 0.18
RPA3-202ENST00000396682 NAV1Q8NEY1 1877 aa16.16■□□□□ 0.18
RPA3-202ENST00000396682 ZKSCAN1P17029 563 aaPredicted RBP16.16■□□□□ 0.18
RPA3-202ENST00000396682 VCAM1P19320 739 aa16.16■□□□□ 0.18
RPA3-202ENST00000396682 CCND3P30281 292 aaPredicted RBP16.16■□□□□ 0.18
RPA3-202ENST00000396682 GUCY1A2P33402 732 aa16.16■□□□□ 0.18
RPA3-202ENST00000396682 PDE3AQ14432 1141 aa16.16■□□□□ 0.18
RPA3-202ENST00000396682 RAB3GAP1Q15042 981 aa16.16■□□□□ 0.18
RPA3-202ENST00000396682 PLEKHH3Q7Z736 793 aa16.16■□□□□ 0.18
RPA3-202ENST00000396682 LRCH3Q96II8 777 aa16.16■□□□□ 0.18
RPA3-202ENST00000396682 FEZ1Q99689 392 aa16.16■□□□□ 0.18
RPA3-202ENST00000396682 KIAA1683Q9H0B3 1180 aa16.16■□□□□ 0.18
RPA3-202ENST00000396682 IL1RAPL2Q9NP60 686 aa16.16■□□□□ 0.18
RPA3-202ENST00000396682 USP17L15C9J2P7 530 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 USP17L13C9JLJ4 530 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 USP17L11C9JVI0 530 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 USP17L18D6R9N7 530 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 USP17L22D6RA61 530 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 USP17L17D6RBQ6 530 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 USP17L19D6RCP7 530 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 USP17L20D6RJB6 530 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 RGS2P41220 211 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 GABPAQ06546 454 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 USP17L24Q0WX57 530 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 ABCB5Q2M3G0 1257 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 CERKLQ49MI3 558 aaPredicted RBP16.15■□□□□ 0.18
RPA3-202ENST00000396682 LHX8Q68G74 356 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 TMED8Q6PL24 325 aaPredicted RBP16.15■□□□□ 0.18
RPA3-202ENST00000396682 CATSPERGQ6ZRH7 1159 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 TTC6Q86TZ1 520 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 ERC1Q8IUD2 1116 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 TRMT44Q8IYL2 757 aaKnown RBP16.15■□□□□ 0.18
RPA3-202ENST00000396682 APBA2Q99767 749 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 RABGAP1Q9Y3P9 1069 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 FRMPD3Q5JV73 1810 aa16.15■□□□□ 0.18
RPA3-202ENST00000396682 COL6A1P12109 1028 aa16.14■□□□□ 0.17
RPA3-202ENST00000396682 SYN1P17600 705 aa16.14■□□□□ 0.17
RPA3-202ENST00000396682 BMP8BP34820 402 aa16.14■□□□□ 0.17
RPA3-202ENST00000396682 CCAR1Q8IX12 1150 aaKnown RBP16.14■□□□□ 0.17
RPA3-202ENST00000396682 MIER1Q8N108 512 aa16.14■□□□□ 0.17
RPA3-202ENST00000396682 FLRT1Q9NZU1 646 aa16.14■□□□□ 0.17
RPA3-202ENST00000396682 BTBD7Q9P203 1132 aa16.14■□□□□ 0.17
RPA3-202ENST00000396682 MAGEB6P1A0A0J9YX57 407 aa16.13■□□□□ 0.17
RPA3-202ENST00000396682 PDE6AP16499 860 aa16.13■□□□□ 0.17
RPA3-202ENST00000396682 USP14P54578 494 aa16.13■□□□□ 0.17
RPA3-202ENST00000396682 MAP2K5Q13163 448 aa16.13■□□□□ 0.17
RPA3-202ENST00000396682 LBX2Q6XYB7 198 aa16.13■□□□□ 0.17
RPA3-202ENST00000396682 RHPN1Q8TCX5 695 aa16.13■□□□□ 0.17
RPA3-202ENST00000396682 DNAH12Q6ZR08 3092 aa16.12■□□□□ 0.17
RPA3-202ENST00000396682 A0A1W2PRG0 241 aa16.12■□□□□ 0.17
RPA3-202ENST00000396682 TCRBV5S4A2TA0A5A2 114 aa16.12■□□□□ 0.17
RPA3-202ENST00000396682 SPDYE16A6NNV3 312 aaPredicted RBP16.12■□□□□ 0.17
RPA3-202ENST00000396682 PTPREP23469 700 aa16.12■□□□□ 0.17
RPA3-202ENST00000396682 MAGEA10P43363 369 aaPredicted RBP16.12■□□□□ 0.17
RPA3-202ENST00000396682 SEPT2Q15019 361 aa16.12■□□□□ 0.17
RPA3-202ENST00000396682 SLC9C2Q5TAH2 1124 aa16.12■□□□□ 0.17
RPA3-202ENST00000396682 RPAP3Q9H6T3 665 aaPredicted RBP16.12■□□□□ 0.17
RPA3-202ENST00000396682 RLFQ13129 1914 aa16.11■□□□□ 0.17
RPA3-202ENST00000396682 POLR3DP05423 398 aaPredicted RBP16.11■□□□□ 0.17
RPA3-202ENST00000396682 CCNA1P78396 465 aa16.11■□□□□ 0.17
RPA3-202ENST00000396682 TTF1Q15361 905 aaPredicted RBP16.11■□□□□ 0.17
RPA3-202ENST00000396682 SIRT2Q8IXJ6 389 aa16.11■□□□□ 0.17
RPA3-202ENST00000396682 LCORLQ8N3X6 602 aa16.11■□□□□ 0.17
RPA3-202ENST00000396682 SDR42E1Q8WUS8 393 aa16.11■□□□□ 0.17
RPA3-202ENST00000396682 EDC3Q96F86 508 aaKnown RBP16.11■□□□□ 0.17
RPA3-202ENST00000396682 CABP5Q9NP86 173 aa16.11■□□□□ 0.17
RPA3-202ENST00000396682 ZNF532Q9HCE3 1301 aa16.11■□□□□ 0.17
RPA3-202ENST00000396682 A0A0G2JMZ2 1700 aa16.11■□□□□ 0.17
RPA3-202ENST00000396682 SLC15A5A6NIM6 579 aa16.1■□□□□ 0.17
RPA3-202ENST00000396682 APBB1O00213 710 aa16.1■□□□□ 0.17
RPA3-202ENST00000396682 GOLIM4O00461 696 aa16.1■□□□□ 0.17
RPA3-202ENST00000396682 IGHA2P01877 340 aa16.1■□□□□ 0.17
RPA3-202ENST00000396682 HOXC6P09630 235 aa16.1■□□□□ 0.17
RPA3-202ENST00000396682 CYP2D6P10635 497 aa16.1■□□□□ 0.17
RPA3-202ENST00000396682 GRB14Q14449 540 aa16.1■□□□□ 0.17
RPA3-202ENST00000396682 LRRC26Q2I0M4 334 aa16.1■□□□□ 0.17
RPA3-202ENST00000396682 HSP90AB4PQ58FF6 505 aa16.1■□□□□ 0.17
RPA3-202ENST00000396682 KIAA1755Q5JYT7 1200 aa16.1■□□□□ 0.17
RPA3-202ENST00000396682 WDR78Q5VTH9 848 aa16.1■□□□□ 0.17
RPA3-202ENST00000396682 SLC44A5Q8NCS7 719 aa16.1■□□□□ 0.17
RPA3-202ENST00000396682 NPLOC4Q8TAT6 608 aa16.1■□□□□ 0.17
RPA3-202ENST00000396682 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.1■□□□□ 0.17
RPA3-202ENST00000396682 DNAJC2Q99543 621 aaKnown RBP16.1■□□□□ 0.17
RPA3-202ENST00000396682 CRNKL1Q9BZJ0 848 aaKnown RBP16.1■□□□□ 0.17
RPA3-202ENST00000396682 CWC22Q9HCG8 908 aaKnown RBP16.1■□□□□ 0.17
RPA3-202ENST00000396682 DCP1AQ9NPI6 582 aaPredicted RBP16.1■□□□□ 0.17
RPA3-202ENST00000396682 MCM9Q9NXL9 1143 aa16.1■□□□□ 0.17
RPA3-202ENST00000396682 ZBED9Q6R2W3 1325 aa16.1■□□□□ 0.17
RPA3-202ENST00000396682 GLRX3O76003 335 aaKnown RBP16.09■□□□□ 0.17
RPA3-202ENST00000396682 SLFNL1Q499Z3 407 aa16.09■□□□□ 0.17
RPA3-202ENST00000396682 KIF1BPQ96EK5 621 aa16.09■□□□□ 0.17
RPA3-202ENST00000396682 ZNF236Q9UL36 1845 aa16.08■□□□□ 0.17
RPA3-202ENST00000396682 SMIM22K7EJ46 135 aa16.08■□□□□ 0.16
RPA3-202ENST00000396682 MPHOSPH10O00566 681 aaKnown RBP16.08■□□□□ 0.16
RPA3-202ENST00000396682 MFSD14CQ5VZR4 134 aa16.08■□□□□ 0.16
RPA3-202ENST00000396682 CLASRPQ8N2M8 674 aaKnown RBP16.08■□□□□ 0.16
RPA3-202ENST00000396682 TRPV1Q8NER1 839 aa16.08■□□□□ 0.16
RPA3-202ENST00000396682 DYNLL2Q96FJ2 89 aa16.08■□□□□ 0.16
RPA3-202ENST00000396682 ARMT1Q9H993 441 aa16.08■□□□□ 0.16
RPA3-202ENST00000396682 A0A0C4DFX4 3053 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms