RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 GRAMD1CQ8IYS0 662 aa13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 PDCL2Q8N4E4 241 aa13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 FERMT2Q96AC1 680 aa13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 TACC3Q9Y6A5 838 aa13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 XDHP47989 1333 aa13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 GRAPQ13588 217 aa13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 PPFIBP1Q86W92 1011 aa13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 TRMT44Q8IYL2 757 aaKnown RBP13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 FAM177A1Q8N128 213 aaPredicted RBP13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 GRAPLQ8TC17 118 aaPredicted RBP13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 RBM17Q96I25 401 aaKnown RBP13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 GPR101Q96P66 508 aaPredicted RBP13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 GGA1Q9UJY5 639 aa13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 NFE2L3Q9Y4A8 694 aa13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 DIXDC1Q155Q3 683 aa13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 TMTC3Q6ZXV5 915 aa13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 VAT1LQ9HCJ6 419 aa13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 SEC63Q9UGP8 760 aaKnown RBP13.17□□□□□ -0.3
PDXDC1-202ENST00000396410 FOXN1O15353 648 aa13.16□□□□□ -0.3
PDXDC1-202ENST00000396410 STX17P56962 302 aa13.16□□□□□ -0.3
PDXDC1-202ENST00000396410 METTL16Q86W50 562 aaKnown RBP13.16□□□□□ -0.3
PDXDC1-202ENST00000396410 TEX11Q8IYF3 940 aa13.16□□□□□ -0.3
PDXDC1-202ENST00000396410 PNMA1Q8ND90 353 aa13.16□□□□□ -0.3
PDXDC1-202ENST00000396410 MARCH6O60337 910 aa13.16□□□□□ -0.3
PDXDC1-202ENST00000396410 SEC23AQ15436 765 aa13.16□□□□□ -0.3
PDXDC1-202ENST00000396410 CCDC47Q96A33 483 aaKnown RBP13.16□□□□□ -0.3
PDXDC1-202ENST00000396410 FBXO2Q9UK22 296 aaPredicted RBP13.16□□□□□ -0.3
PDXDC1-202ENST00000396410 MYH7P12883 1935 aa13.16□□□□□ -0.3
PDXDC1-202ENST00000396410 CCDC148Q8NFR7 591 aa13.16□□□□□ -0.3
PDXDC1-202ENST00000396410 DYNLL2Q96FJ2 89 aa13.16□□□□□ -0.3
PDXDC1-202ENST00000396410 MAN1B1Q9UKM7 699 aa13.16□□□□□ -0.3
PDXDC1-202ENST00000396410 HPSEQ9Y251 543 aa13.16□□□□□ -0.3
PDXDC1-202ENST00000396410 ANKRD36CQ5JPF3 1778 aa13.16□□□□□ -0.3
PDXDC1-202ENST00000396410 SYMPKQ92797 1274 aaKnown RBP13.16□□□□□ -0.3
PDXDC1-202ENST00000396410 PYM1Q9BRP8 204 aaKnown RBP13.16□□□□□ -0.3
PDXDC1-202ENST00000396410 BCL2L12Q9HB09 334 aa13.16□□□□□ -0.3
PDXDC1-202ENST00000396410 PHLPP1O60346 1717 aa13.15□□□□□ -0.3
PDXDC1-202ENST00000396410 TOB1P50616 345 aaPredicted RBP13.15□□□□□ -0.3
PDXDC1-202ENST00000396410 NBPF11Q86T75 865 aa13.15□□□□□ -0.3
PDXDC1-202ENST00000396410 IQUBQ8NA54 791 aa13.15□□□□□ -0.3
PDXDC1-202ENST00000396410 TUBE1Q9UJT0 475 aa13.15□□□□□ -0.3
PDXDC1-202ENST00000396410 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.15□□□□□ -0.3
PDXDC1-202ENST00000396410 FAM205CA6NFA0 338 aa13.15□□□□□ -0.3
PDXDC1-202ENST00000396410 ATP2B2Q01814 1243 aa13.15□□□□□ -0.3
PDXDC1-202ENST00000396410 GRIN1Q05586 938 aa13.15□□□□□ -0.3
PDXDC1-202ENST00000396410 PTGDRQ13258 359 aa13.15□□□□□ -0.3
PDXDC1-202ENST00000396410 STAMQ92783 540 aa13.15□□□□□ -0.3
PDXDC1-202ENST00000396410 GPKOWQ92917 476 aaPredicted RBP eCLIP13.15□□□□□ -0.3
PDXDC1-202ENST00000396410 AHDC1Q5TGY3 1603 aaPredicted RBP13.15□□□□□ -0.3
PDXDC1-202ENST00000396410 F8W031 263 aaPredicted RBP13.15□□□□□ -0.3
PDXDC1-202ENST00000396410 ORC4O43929 436 aa13.15□□□□□ -0.3
PDXDC1-202ENST00000396410 SH3RF3Q8TEJ3 882 aaPredicted RBP13.15□□□□□ -0.3
PDXDC1-202ENST00000396410 EPSTI1Q96J88 318 aa13.15□□□□□ -0.3
PDXDC1-202ENST00000396410 ZSCAN12O43309 604 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 PICALMQ13492 652 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 NFIXQ14938 502 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 TXNRD3Q86VQ6 643 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 ZNF579Q8NAF0 562 aaKnown RBP13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 PLCG2P16885 1265 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 RRAGBQ5VZM2 374 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 CPLX3Q8WVH0 158 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 RIMBP2O15034 1052 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 STAT6P42226 847 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 PTPN21Q16825 1174 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 MNS1Q8NEH6 495 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 PHF20Q9BVI0 1012 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 AKAP11Q9UKA4 1901 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 NWD2Q9ULI1 1742 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 MYO1BO43795 1136 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 UBA7P41226 1012 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 BTDP43251 543 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 NAPAP54920 295 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 CCAR2Q8N163 923 aaKnown RBP13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 TRIML1Q8N9V2 468 aa13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 CCDC12Q8WUD4 166 aaPredicted RBP13.14□□□□□ -0.31
PDXDC1-202ENST00000396410 TROAPQ12815 778 aa13.13□□□□□ -0.31
PDXDC1-202ENST00000396410 BLIDQ8IZY5 108 aa13.13□□□□□ -0.31
PDXDC1-202ENST00000396410 SRBD1Q8N5C6 995 aaKnown RBP13.13□□□□□ -0.31
PDXDC1-202ENST00000396410 MFSD14BQ5SR56 506 aa13.13□□□□□ -0.31
PDXDC1-202ENST00000396410 TRIM34Q9BYJ4 488 aa13.13□□□□□ -0.31
PDXDC1-202ENST00000396410 USP17L3A6NCW0 530 aa13.13□□□□□ -0.31
PDXDC1-202ENST00000396410 USP17L4A6NCW7 530 aa13.13□□□□□ -0.31
PDXDC1-202ENST00000396410 ATP2B4P23634 1241 aa13.13□□□□□ -0.31
PDXDC1-202ENST00000396410 USP17L1Q7RTZ2 530 aa13.13□□□□□ -0.31
PDXDC1-202ENST00000396410 OSBPL5Q9H0X9 879 aaPredicted RBP13.13□□□□□ -0.31
PDXDC1-202ENST00000396410 SERPINB2P05120 415 aa13.12□□□□□ -0.31
PDXDC1-202ENST00000396410 STIM1Q13586 685 aa13.12□□□□□ -0.31
PDXDC1-202ENST00000396410 DTHD1Q6ZMT9 781 aa13.12□□□□□ -0.31
PDXDC1-202ENST00000396410 USP27XA6NNY8 438 aa13.12□□□□□ -0.31
PDXDC1-202ENST00000396410 TSR1Q2NL82 804 aaKnown RBP13.12□□□□□ -0.31
PDXDC1-202ENST00000396410 SYT10Q6XYQ8 523 aa13.12□□□□□ -0.31
PDXDC1-202ENST00000396410 BLZF1Q9H2G9 400 aa13.12□□□□□ -0.31
PDXDC1-202ENST00000396410 PARP1P09874 1014 aaKnown RBP13.12□□□□□ -0.31
PDXDC1-202ENST00000396410 GOLGA8HP0CJ92 632 aa13.12□□□□□ -0.31
PDXDC1-202ENST00000396410 PPP4R3BQ5MIZ7 849 aa13.12□□□□□ -0.31
PDXDC1-202ENST00000396410 USP49Q70CQ1 688 aa13.12□□□□□ -0.31
PDXDC1-202ENST00000396410 SYNRGQ9UMZ2 1314 aa13.12□□□□□ -0.31
PDXDC1-202ENST00000396410 COL16A1Q07092 1604 aaPredicted RBP13.12□□□□□ -0.31
PDXDC1-202ENST00000396410 SBK1Q52WX2 424 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms