RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 IRF5Q13568 498 aa22.08■■□□□ 1.13
FXN-203ENST00000396366 Q3C1V9 767 aa22.08■■□□□ 1.13
FXN-203ENST00000396366 GJD2Q9UKL4 321 aa22.08■■□□□ 1.13
FXN-203ENST00000396366 INHAP05111 366 aa22.07■■□□□ 1.12
FXN-203ENST00000396366 UBXN2AP68543 259 aa22.07■■□□□ 1.12
FXN-203ENST00000396366 PXYLP1Q8TE99 480 aa22.07■■□□□ 1.12
FXN-203ENST00000396366 C12orf42Q96LP6 360 aa22.07■■□□□ 1.12
FXN-203ENST00000396366 CRBNQ96SW2 442 aa22.07■■□□□ 1.12
FXN-203ENST00000396366 SLC4A4Q9Y6R1 1079 aa22.07■■□□□ 1.12
FXN-203ENST00000396366 A0A1W2PRG0 241 aa22.06■■□□□ 1.12
FXN-203ENST00000396366 USP17L12C9JPN9 530 aa22.06■■□□□ 1.12
FXN-203ENST00000396366 USP17L21D6R901 530 aa22.06■■□□□ 1.12
FXN-203ENST00000396366 GPRC5AQ8NFJ5 357 aa22.06■■□□□ 1.12
FXN-203ENST00000396366 OTUD7AQ8TE49 926 aaPredicted RBP22.06■■□□□ 1.12
FXN-203ENST00000396366 PAGR1Q9BTK6 254 aa22.06■■□□□ 1.12
FXN-203ENST00000396366 KIAA1683Q9H0B3 1180 aa22.06■■□□□ 1.12
FXN-203ENST00000396366 ATP8A2Q9NTI2 1148 aa22.06■■□□□ 1.12
FXN-203ENST00000396366 PLXNB2O15031 1838 aa22.06■■□□□ 1.12
FXN-203ENST00000396366 GJB1P08034 283 aa22.05■■□□□ 1.12
FXN-203ENST00000396366 C12orf60Q5U649 245 aa22.05■■□□□ 1.12
FXN-203ENST00000396366 ZSCAN25Q6NSZ9 544 aa22.05■■□□□ 1.12
FXN-203ENST00000396366 USP17L15C9J2P7 530 aa22.04■■□□□ 1.12
FXN-203ENST00000396366 USP17L13C9JLJ4 530 aa22.04■■□□□ 1.12
FXN-203ENST00000396366 USP17L11C9JVI0 530 aa22.04■■□□□ 1.12
FXN-203ENST00000396366 USP17L18D6R9N7 530 aa22.04■■□□□ 1.12
FXN-203ENST00000396366 USP17L22D6RA61 530 aa22.04■■□□□ 1.12
FXN-203ENST00000396366 USP17L17D6RBQ6 530 aa22.04■■□□□ 1.12
FXN-203ENST00000396366 USP17L19D6RCP7 530 aa22.04■■□□□ 1.12
FXN-203ENST00000396366 USP17L20D6RJB6 530 aa22.04■■□□□ 1.12
FXN-203ENST00000396366 AKR1B1P15121 316 aa22.04■■□□□ 1.12
FXN-203ENST00000396366 VCAM1P19320 739 aa22.04■■□□□ 1.12
FXN-203ENST00000396366 GJA8P48165 433 aa22.04■■□□□ 1.12
FXN-203ENST00000396366 USP17L24Q0WX57 530 aa22.04■■□□□ 1.12
FXN-203ENST00000396366 CATSPERGQ6ZRH7 1159 aa22.04■■□□□ 1.12
FXN-203ENST00000396366 CLEC10AQ8IUN9 316 aa22.04■■□□□ 1.12
FXN-203ENST00000396366 KBTBD3Q8NAB2 608 aa22.04■■□□□ 1.12
FXN-203ENST00000396366 PORCNQ9H237 461 aa22.04■■□□□ 1.12
FXN-203ENST00000396366 CNMDO75829 334 aa22.03■■□□□ 1.12
FXN-203ENST00000396366 USP14P54578 494 aa22.03■■□□□ 1.12
FXN-203ENST00000396366 ERVK-9P63128 1117 aa22.03■■□□□ 1.12
FXN-203ENST00000396366 ERVK-24P63145 666 aa22.03■■□□□ 1.12
FXN-203ENST00000396366 TRIM32Q13049 653 aa22.03■■□□□ 1.12
FXN-203ENST00000396366 CTR9Q6PD62 1173 aa22.03■■□□□ 1.12
FXN-203ENST00000396366 SIAH1Q8IUQ4 282 aa22.03■■□□□ 1.12
FXN-203ENST00000396366 GPATCH3Q96I76 525 aa22.03■■□□□ 1.12
FXN-203ENST00000396366 STRBPQ96SI9 672 aaKnown RBP22.03■■□□□ 1.12
FXN-203ENST00000396366 SWAP70Q9UH65 585 aa22.03■■□□□ 1.12
FXN-203ENST00000396366 MYH8P13535 1937 aa22.02■■□□□ 1.12
FXN-203ENST00000396366 CDK8P49336 464 aa22.02■■□□□ 1.12
FXN-203ENST00000396366 KIAA1755Q5JYT7 1200 aa22.02■■□□□ 1.12
FXN-203ENST00000396366 U2AF1L4Q8WU68 220 aaKnown RBP22.02■■□□□ 1.12
FXN-203ENST00000396366 OSBP2Q969R2 916 aa22.02■■□□□ 1.12
FXN-203ENST00000396366 RPAP3Q9H6T3 665 aaPredicted RBP22.02■■□□□ 1.12
FXN-203ENST00000396366 RNF113AO15541 343 aaKnown RBP22.01■■□□□ 1.11
FXN-203ENST00000396366 CYP2B6P20813 491 aa22.01■■□□□ 1.11
FXN-203ENST00000396366 NKX2-3Q8TAU0 364 aa22.01■■□□□ 1.11
FXN-203ENST00000396366 GSG1L2A8MUP6 293 aa22■■□□□ 1.11
FXN-203ENST00000396366 SGPL1O95470 568 aa22■■□□□ 1.11
FXN-203ENST00000396366 TMEM179Q6ZVK1 233 aa22■■□□□ 1.11
FXN-203ENST00000396366 PI4K2BQ8TCG2 481 aa22■■□□□ 1.11
FXN-203ENST00000396366 DEFB118Q96PH6 123 aa22■■□□□ 1.11
FXN-203ENST00000396366 BTBD7Q9P203 1132 aa22■■□□□ 1.11
FXN-203ENST00000396366 M0R2C6 588 aa21.99■■□□□ 1.11
FXN-203ENST00000396366 C16orf86Q6ZW13 317 aa21.99■■□□□ 1.11
FXN-203ENST00000396366 GPR142Q7Z601 462 aa21.99■■□□□ 1.11
FXN-203ENST00000396366 UBE2Q1Q7Z7E8 422 aa21.99■■□□□ 1.11
FXN-203ENST00000396366 STK11IPQ8N1F8 1099 aa21.99■■□□□ 1.11
FXN-203ENST00000396366 TRIB2Q92519 343 aa21.99■■□□□ 1.11
FXN-203ENST00000396366 DDRGK1Q96HY6 314 aa21.99■■□□□ 1.11
FXN-203ENST00000396366 RABGAP1Q9Y3P9 1069 aa21.99■■□□□ 1.11
FXN-203ENST00000396366 MAPK4P31152 587 aa21.98■■□□□ 1.11
FXN-203ENST00000396366 CCAR1Q8IX12 1150 aaKnown RBP21.98■■□□□ 1.11
FXN-203ENST00000396366 AMOTL1Q8IY63 956 aa21.98■■□□□ 1.11
FXN-203ENST00000396366 GTF3C2Q8WUA4 911 aaPredicted RBP21.98■■□□□ 1.11
FXN-203ENST00000396366 APPBP2Q92624 585 aa21.98■■□□□ 1.11
FXN-203ENST00000396366 NUDT12Q9BQG2 462 aa21.98■■□□□ 1.11
FXN-203ENST00000396366 PAK6Q9NQU5 681 aaPredicted RBP21.98■■□□□ 1.11
FXN-203ENST00000396366 TTC41PQ6P2S7 1318 aa21.98■■□□□ 1.11
FXN-203ENST00000396366 SPDYE16A6NNV3 312 aaPredicted RBP21.97■■□□□ 1.11
FXN-203ENST00000396366 TFRCP02786 760 aaKnown RBP21.97■■□□□ 1.11
FXN-203ENST00000396366 HMGCRP04035 888 aa21.97■■□□□ 1.11
FXN-203ENST00000396366 MORN1Q5T089 497 aa21.97■■□□□ 1.11
FXN-203ENST00000396366 PLEKHH3Q7Z736 793 aa21.97■■□□□ 1.11
FXN-203ENST00000396366 SPICE1Q8N0Z3 855 aa21.97■■□□□ 1.11
FXN-203ENST00000396366 USP6NLQ92738 828 aa21.97■■□□□ 1.11
FXN-203ENST00000396366 SEC62Q99442 399 aaKnown RBP21.97■■□□□ 1.11
FXN-203ENST00000396366 ICA1Q05084 483 aa21.96■■□□□ 1.11
FXN-203ENST00000396366 CCL14Q16627 93 aa21.96■■□□□ 1.11
FXN-203ENST00000396366 ANKRD45Q5TZF3 282 aa21.96■■□□□ 1.11
FXN-203ENST00000396366 CCDC17Q96LX7 622 aa21.96■■□□□ 1.11
FXN-203ENST00000396366 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.96■■□□□ 1.11
FXN-203ENST00000396366 MINDY4BA8MYZ0 360 aa21.95■■□□□ 1.1
FXN-203ENST00000396366 GPAA1O43292 621 aa21.95■■□□□ 1.1
FXN-203ENST00000396366 EEF2P13639 858 aaKnown RBP21.95■■□□□ 1.1
FXN-203ENST00000396366 MX1P20591 662 aa21.95■■□□□ 1.1
FXN-203ENST00000396366 COG2Q14746 738 aa21.95■■□□□ 1.1
FXN-203ENST00000396366 LBX2Q6XYB7 198 aa21.95■■□□□ 1.1
FXN-203ENST00000396366 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.95■■□□□ 1.1
FXN-203ENST00000396366 TANGO6Q9C0B7 1094 aa21.95■■□□□ 1.1
FXN-203ENST00000396366 EPB41L4AQ9HCS5 686 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms