RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 PDCLQ13371 301 aa9.46□□□□□ -0.89
NDE1-202ENST00000396355 CCDC6Q16204 474 aa9.46□□□□□ -0.89
NDE1-202ENST00000396355 LRRC31Q6UY01 552 aa9.46□□□□□ -0.89
NDE1-202ENST00000396355 SND1Q7KZF4 910 aaKnown RBP eCLIP9.46□□□□□ -0.89
NDE1-202ENST00000396355 AATFQ9NY61 560 aaKnown RBP eCLIP9.46□□□□□ -0.89
NDE1-202ENST00000396355 TLR7Q9NYK1 1049 aaKnown RBP9.46□□□□□ -0.89
NDE1-202ENST00000396355 BRWD3Q6RI45 1802 aa9.46□□□□□ -0.89
NDE1-202ENST00000396355 PLEKHG2Q9H7P9 1386 aa9.46□□□□□ -0.89
NDE1-202ENST00000396355 DISP2A7MBM2 1401 aa9.46□□□□□ -0.89
NDE1-202ENST00000396355 CTAGE9A4FU28 777 aa9.46□□□□□ -0.9
NDE1-202ENST00000396355 MMP10P09238 476 aa9.46□□□□□ -0.9
NDE1-202ENST00000396355 MYL6BP14649 208 aa9.46□□□□□ -0.9
NDE1-202ENST00000396355 MRPS25P82663 173 aaKnown RBP9.46□□□□□ -0.9
NDE1-202ENST00000396355 PDIA6Q15084 440 aa9.46□□□□□ -0.9
NDE1-202ENST00000396355 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.46□□□□□ -0.9
NDE1-202ENST00000396355 CNTROBQ8N137 903 aa9.46□□□□□ -0.9
NDE1-202ENST00000396355 DHX58Q96C10 678 aa9.46□□□□□ -0.9
NDE1-202ENST00000396355 DBF4Q9UBU7 674 aaPredicted RBP9.46□□□□□ -0.9
NDE1-202ENST00000396355 ANAPC4Q9UJX5 808 aa9.46□□□□□ -0.9
NDE1-202ENST00000396355 SERPINA10Q9UK55 444 aa9.46□□□□□ -0.9
NDE1-202ENST00000396355 SASH3O75995 380 aa9.46□□□□□ -0.9
NDE1-202ENST00000396355 SASH1O94885 1247 aa9.46□□□□□ -0.9
NDE1-202ENST00000396355 TBC1D8O95759 1140 aa9.46□□□□□ -0.9
NDE1-202ENST00000396355 IFIT2P09913 472 aaKnown RBP9.46□□□□□ -0.9
NDE1-202ENST00000396355 PAX3P23760 479 aa9.46□□□□□ -0.9
NDE1-202ENST00000396355 USP5P45974 858 aa9.46□□□□□ -0.9
NDE1-202ENST00000396355 BRD3Q15059 726 aa9.46□□□□□ -0.9
NDE1-202ENST00000396355 SUGP1Q8IWZ8 645 aaKnown RBP9.46□□□□□ -0.9
NDE1-202ENST00000396355 UBAP1Q9NZ09 502 aa9.46□□□□□ -0.9
NDE1-202ENST00000396355 SCN11AQ9UI33 1791 aa9.45□□□□□ -0.9
NDE1-202ENST00000396355 CETN3O15182 167 aa9.45□□□□□ -0.9
NDE1-202ENST00000396355 UPP2O95045 317 aa9.45□□□□□ -0.9
NDE1-202ENST00000396355 PSMC4P43686 418 aa9.45□□□□□ -0.9
NDE1-202ENST00000396355 PDCD2Q16342 344 aaPredicted RBP9.45□□□□□ -0.9
NDE1-202ENST00000396355 PRPF40BQ6NWY9 871 aaKnown RBP9.45□□□□□ -0.9
NDE1-202ENST00000396355 KCNV2Q8TDN2 545 aa9.45□□□□□ -0.9
NDE1-202ENST00000396355 IFT81Q8WYA0 676 aa9.45□□□□□ -0.9
NDE1-202ENST00000396355 SUCLG2Q96I99 432 aa9.45□□□□□ -0.9
NDE1-202ENST00000396355 GUCA1BQ9UMX6 200 aa9.45□□□□□ -0.9
NDE1-202ENST00000396355 TAF6LQ9Y6J9 622 aa9.45□□□□□ -0.9
NDE1-202ENST00000396355 ZPR1O75312 459 aa9.45□□□□□ -0.9
NDE1-202ENST00000396355 ZNF189O75820 626 aaPredicted RBP9.45□□□□□ -0.9
NDE1-202ENST00000396355 SLC8A1P32418 973 aa9.45□□□□□ -0.9
NDE1-202ENST00000396355 BICDL1Q6ZP65 573 aa9.45□□□□□ -0.9
NDE1-202ENST00000396355 KLHL23Q8NBE8 558 aa9.45□□□□□ -0.9
NDE1-202ENST00000396355 RASSF8Q8NHQ8 419 aa9.45□□□□□ -0.9
NDE1-202ENST00000396355 KLHDC4Q8TBB5 520 aa9.45□□□□□ -0.9
NDE1-202ENST00000396355 CCDC87Q9NVE4 849 aa9.45□□□□□ -0.9
NDE1-202ENST00000396355 GPATCH3Q96I76 525 aa9.45□□□□□ -0.9
NDE1-202ENST00000396355 TTC41PQ6P2S7 1318 aa9.45□□□□□ -0.9
NDE1-202ENST00000396355 KDM6AO15550 1401 aaPredicted RBP9.44□□□□□ -0.9
NDE1-202ENST00000396355 NR1I2O75469 434 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 TMED1Q13445 227 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 MIPOL1Q8TD10 442 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 SNRNP27Q8WVK2 155 aaKnown RBP9.44□□□□□ -0.9
NDE1-202ENST00000396355 FAM227BQ96M60 508 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 PSMB7Q99436 277 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 PCDH11XQ9BZA7 1347 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 PCDH11YQ9BZA8 1340 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 PNPLA7Q6ZV29 1317 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 CCDC151A5D8V7 595 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.44□□□□□ -0.9
NDE1-202ENST00000396355 ATP8B1O43520 1251 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 GLRX3O76003 335 aaKnown RBP9.44□□□□□ -0.9
NDE1-202ENST00000396355 IGKV5-2P06315 115 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 VPS41P49754 854 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 ADKP55263 362 aaKnown RBP9.44□□□□□ -0.9
NDE1-202ENST00000396355 CRYMQ14894 314 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 KSR2Q6VAB6 950 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 IGSF22Q8N9C0 903 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 RABGGTAQ92696 567 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 EAF2Q96CJ1 260 aaPredicted RBP9.44□□□□□ -0.9
NDE1-202ENST00000396355 SPAG5Q96R06 1193 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 AKAP2Q9Y2D5 859 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 A0A0G2JLW4 131 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 SLC3A2P08195 630 aaKnown RBP9.44□□□□□ -0.9
NDE1-202ENST00000396355 SESN3P58005 492 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 RIC3Q7Z5B4 369 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 KSR1Q8IVT5 923 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 LMNTD2Q8IXW0 634 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 ITFG2Q969R8 447 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 BAG1Q99933 345 aaPredicted RBP9.44□□□□□ -0.9
NDE1-202ENST00000396355 TCHPQ9BT92 498 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 ZNF711Q9Y462 761 aa9.44□□□□□ -0.9
NDE1-202ENST00000396355 GOLGA6L9A6NEM1 432 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 BACH1O14867 736 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 OPA1O60313 960 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 PDHBP11177 359 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 H2AFXP16104 143 aaPredicted RBP9.43□□□□□ -0.9
NDE1-202ENST00000396355 SLC39A6Q13433 755 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 ACBD5Q5T8D3 534 aaPredicted RBP9.43□□□□□ -0.9
NDE1-202ENST00000396355 NBPF10Q6P3W6 841 aaKnown RBP9.43□□□□□ -0.9
NDE1-202ENST00000396355 CCDC50Q8IVM0 306 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 ECHDC1Q9NTX5 307 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 ALS2Q96Q42 1657 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 PLCH1Q4KWH8 1693 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 LOC102724428A0A0B4J2F2 783 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 MYO1BO43795 1136 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 SIK1P57059 783 aa9.43□□□□□ -0.9
NDE1-202ENST00000396355 GRM1Q13255 1194 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms