RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 TMTC3Q6ZXV5 915 aa15.61■□□□□ 0.09
CLIC1-209ENST00000395892 SRBD1Q8N5C6 995 aaKnown RBP15.61■□□□□ 0.09
CLIC1-209ENST00000395892 SHISA4Q96DD7 197 aa15.61■□□□□ 0.09
CLIC1-209ENST00000395892 ZNF287Q9HBT7 754 aa15.61■□□□□ 0.09
CLIC1-209ENST00000395892 RBM28Q9NW13 759 aaKnown RBP15.61■□□□□ 0.09
CLIC1-209ENST00000395892 RCOR1Q9UKL0 485 aa15.61■□□□□ 0.09
CLIC1-209ENST00000395892 ELP1O95163 1332 aa15.61■□□□□ 0.09
CLIC1-209ENST00000395892 MYO3BQ8WXR4 1341 aa15.61■□□□□ 0.09
CLIC1-209ENST00000395892 SIPA1L1O43166 1804 aa15.61■□□□□ 0.09
CLIC1-209ENST00000395892 KIF28PB7ZC32 967 aa15.6■□□□□ 0.09
CLIC1-209ENST00000395892 FIBPO43427 364 aa15.6■□□□□ 0.09
CLIC1-209ENST00000395892 PLEKHA8P1O95397 391 aa15.6■□□□□ 0.09
CLIC1-209ENST00000395892 MBD3O95983 291 aa15.6■□□□□ 0.09
CLIC1-209ENST00000395892 TSPY3P0CV98 308 aa15.6■□□□□ 0.09
CLIC1-209ENST00000395892 TSPY8P0CW00 308 aa15.6■□□□□ 0.09
CLIC1-209ENST00000395892 SHMT1P34896 483 aa15.6■□□□□ 0.09
CLIC1-209ENST00000395892 DEKP35659 375 aaKnown RBP15.6■□□□□ 0.09
CLIC1-209ENST00000395892 KIF23Q02241 960 aaPredicted RBP15.6■□□□□ 0.09
CLIC1-209ENST00000395892 CXCL9Q07325 125 aa15.6■□□□□ 0.09
CLIC1-209ENST00000395892 MKRN4PQ13434 485 aaPredicted RBP15.6■□□□□ 0.09
CLIC1-209ENST00000395892 ATL3Q6DD88 541 aa15.6■□□□□ 0.09
CLIC1-209ENST00000395892 METTL16Q86W50 562 aaKnown RBP15.6■□□□□ 0.09
CLIC1-209ENST00000395892 LEO1Q8WVC0 666 aaPredicted RBP15.6■□□□□ 0.09
CLIC1-209ENST00000395892 TMEM47Q9BQJ4 181 aa15.6■□□□□ 0.09
CLIC1-209ENST00000395892 RNF26Q9BY78 433 aaPredicted RBP15.6■□□□□ 0.09
CLIC1-209ENST00000395892 EHD4Q9H223 541 aa15.6■□□□□ 0.09
CLIC1-209ENST00000395892 FSD2A1L4K1 749 aa15.59■□□□□ 0.09
CLIC1-209ENST00000395892 DDTLA6NHG4 134 aaPredicted RBP15.59■□□□□ 0.09
CLIC1-209ENST00000395892 PITPNM1O00562 1244 aa15.59■□□□□ 0.09
CLIC1-209ENST00000395892 NCLP19338 710 aaKnown RBP15.59■□□□□ 0.09
CLIC1-209ENST00000395892 PRELPP51888 382 aa15.59■□□□□ 0.09
CLIC1-209ENST00000395892 CACNB3P54284 484 aa15.59■□□□□ 0.09
CLIC1-209ENST00000395892 UBE2HP62256 183 aa15.59■□□□□ 0.09
CLIC1-209ENST00000395892 GRM4Q14833 912 aa15.59■□□□□ 0.09
CLIC1-209ENST00000395892 MTMR14Q8NCE2 650 aa15.59■□□□□ 0.09
CLIC1-209ENST00000395892 ZBED3Q96IU2 234 aaPredicted RBP15.59■□□□□ 0.09
CLIC1-209ENST00000395892 SCAND2PQ9GZW5 306 aaPredicted RBP15.59■□□□□ 0.09
CLIC1-209ENST00000395892 TDRD3Q9H7E2 651 aaKnown RBP15.59■□□□□ 0.09
CLIC1-209ENST00000395892 TMEM63CQ9P1W3 806 aa15.59■□□□□ 0.09
CLIC1-209ENST00000395892 RBM27Q9P2N5 1060 aaKnown RBP15.59■□□□□ 0.09
CLIC1-209ENST00000395892 SWAP70Q9UH65 585 aa15.59■□□□□ 0.09
CLIC1-209ENST00000395892 PLIN4Q96Q06 1357 aa15.59■□□□□ 0.09
CLIC1-209ENST00000395892 ENTPD3O75355 529 aa15.58■□□□□ 0.08
CLIC1-209ENST00000395892 DEXIO95424 95 aa15.58■□□□□ 0.08
CLIC1-209ENST00000395892 SLURP2P0DP57 97 aa15.58■□□□□ 0.08
CLIC1-209ENST00000395892 AKR1B1P15121 316 aa15.58■□□□□ 0.08
CLIC1-209ENST00000395892 U2AF2P26368 475 aaKnown RBP eCLIP15.58■□□□□ 0.08
CLIC1-209ENST00000395892 RBM5P52756 815 aaKnown RBP eCLIP15.58■□□□□ 0.08
CLIC1-209ENST00000395892 CSPP1Q1MSJ5 1256 aa15.58■□□□□ 0.08
CLIC1-209ENST00000395892 SLC35G1Q2M3R5 365 aa15.58■□□□□ 0.08
CLIC1-209ENST00000395892 NIM1KQ8IY84 436 aa15.58■□□□□ 0.08
CLIC1-209ENST00000395892 CCDC82Q8N4S0 544 aa15.58■□□□□ 0.08
CLIC1-209ENST00000395892 PNMA1Q8ND90 353 aa15.58■□□□□ 0.08
CLIC1-209ENST00000395892 AGBL3Q8NEM8 1001 aa15.58■□□□□ 0.08
CLIC1-209ENST00000395892 WASF1Q92558 559 aa15.58■□□□□ 0.08
CLIC1-209ENST00000395892 PGBD1Q96JS3 809 aa15.58■□□□□ 0.08
CLIC1-209ENST00000395892 USP28Q96RU2 1077 aa15.58■□□□□ 0.08
CLIC1-209ENST00000395892 TAOK3Q9H2K8 898 aa15.58■□□□□ 0.08
CLIC1-209ENST00000395892 DNAJC18Q9H819 358 aa15.58■□□□□ 0.08
CLIC1-209ENST00000395892 KAT14Q9H8E8 782 aa15.58■□□□□ 0.08
CLIC1-209ENST00000395892 SERPINB13Q9UIV8 391 aa15.58■□□□□ 0.08
CLIC1-209ENST00000395892 V9GY48 417 aaPredicted RBP15.58■□□□□ 0.08
CLIC1-209ENST00000395892 LTBP3Q9NS15 1303 aa15.58■□□□□ 0.08
CLIC1-209ENST00000395892 GREB1LQ9C091 1923 aaPredicted RBP15.57■□□□□ 0.08
CLIC1-209ENST00000395892 PALM3A6NDB9 673 aaPredicted RBP15.57■□□□□ 0.08
CLIC1-209ENST00000395892 CAVIN1Q6NZI2 390 aaKnown RBP15.57■□□□□ 0.08
CLIC1-209ENST00000395892 BRAPQ7Z569 592 aa15.57■□□□□ 0.08
CLIC1-209ENST00000395892 GAS2L3Q86XJ1 694 aa15.57■□□□□ 0.08
CLIC1-209ENST00000395892 FOXP4Q8IVH2 680 aaPredicted RBP15.57■□□□□ 0.08
CLIC1-209ENST00000395892 TRIM22Q8IYM9 498 aa15.57■□□□□ 0.08
CLIC1-209ENST00000395892 NLGN2Q8NFZ4 835 aa15.57■□□□□ 0.08
CLIC1-209ENST00000395892 CEP95Q96GE4 821 aa15.57■□□□□ 0.08
CLIC1-209ENST00000395892 DHX36Q9H2U1 1008 aaKnown RBP15.57■□□□□ 0.08
CLIC1-209ENST00000395892 MAD2L2Q9UI95 211 aa15.57■□□□□ 0.08
CLIC1-209ENST00000395892 CFAP45Q9UL16 551 aa15.57■□□□□ 0.08
CLIC1-209ENST00000395892 TAOK2Q9UL54 1235 aa15.57■□□□□ 0.08
CLIC1-209ENST00000395892 CNTNAP5Q8WYK1 1306 aa15.57■□□□□ 0.08
CLIC1-209ENST00000395892 MYH6P13533 1939 aa15.56■□□□□ 0.08
CLIC1-209ENST00000395892 TOP1P11387 765 aaKnown RBP15.56■□□□□ 0.08
CLIC1-209ENST00000395892 ZNF445P59923 1031 aa15.56■□□□□ 0.08
CLIC1-209ENST00000395892 TCP10Q12799 353 aa15.56■□□□□ 0.08
CLIC1-209ENST00000395892 TATDN1Q6P1N9 297 aa15.56■□□□□ 0.08
CLIC1-209ENST00000395892 STAG2Q8N3U4 1231 aa15.56■□□□□ 0.08
CLIC1-209ENST00000395892 CTCFLQ8NI51 663 aaPredicted RBP15.56■□□□□ 0.08
CLIC1-209ENST00000395892 SPATA32Q96LK8 384 aa15.56■□□□□ 0.08
CLIC1-209ENST00000395892 ZNF396Q96N95 335 aaPredicted RBP15.56■□□□□ 0.08
CLIC1-209ENST00000395892 FTOQ9C0B1 505 aaKnown RBP eCLIP15.56■□□□□ 0.083e-52■□□□□ 9.4
CLIC1-209ENST00000395892 MTMR4Q9NYA4 1195 aa15.56■□□□□ 0.08
CLIC1-209ENST00000395892 RTEL1Q9NZ71 1219 aa15.56■□□□□ 0.08
CLIC1-209ENST00000395892 PI4KBQ9UBF8 816 aa15.56■□□□□ 0.08
CLIC1-209ENST00000395892 PPP1R1BQ9UD71 204 aaPredicted RBP15.56■□□□□ 0.08
CLIC1-209ENST00000395892 BCS1LQ9Y276 419 aa15.56■□□□□ 0.08
CLIC1-209ENST00000395892 COL2A1P02458 1487 aaPredicted RBP15.55■□□□□ 0.08
CLIC1-209ENST00000395892 ATRNL1Q5VV63 1379 aa15.55■□□□□ 0.08
CLIC1-209ENST00000395892 MMP1P03956 469 aa15.55■□□□□ 0.08
CLIC1-209ENST00000395892 HLA-DOAP06340 250 aa15.55■□□□□ 0.08
CLIC1-209ENST00000395892 VEGFAP15692 232 aaPredicted RBP15.55■□□□□ 0.08
CLIC1-209ENST00000395892 ZSCAN23Q3MJ62 389 aa15.55■□□□□ 0.08
CLIC1-209ENST00000395892 MYSM1Q5VVJ2 828 aa15.55■□□□□ 0.08
CLIC1-209ENST00000395892 CIAPIN1Q6FI81 312 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms