RNA–Protein interactions for RNA: ENST00000395725.7

PTPN20-207, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 5 BASIC

Gene PTPN20, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-207ENST00000395725 USP17L21D6R901 530 aa13.87□□□□□ -0.19
PTPN20-207ENST00000395725 FMNL1O95466 1100 aaPredicted RBP13.87□□□□□ -0.19
PTPN20-207ENST00000395725 NUCB1Q02818 461 aa13.87□□□□□ -0.19
PTPN20-207ENST00000395725 CTR9Q6PD62 1173 aa13.87□□□□□ -0.19
PTPN20-207ENST00000395725 SLAIN1Q8ND83 568 aa13.87□□□□□ -0.19
PTPN20-207ENST00000395725 ZNF333Q96JL9 665 aa13.87□□□□□ -0.19
PTPN20-207ENST00000395725 TRIM47Q96LD4 638 aa13.87□□□□□ -0.19
PTPN20-207ENST00000395725 FSD1Q9BTV5 496 aa13.87□□□□□ -0.19
PTPN20-207ENST00000395725 ARHGEF10LQ9HCE6 1279 aa13.87□□□□□ -0.19
PTPN20-207ENST00000395725 BAZ2AQ9UIF9 1905 aaKnown RBP13.87□□□□□ -0.19
PTPN20-207ENST00000395725 GPAA1O43292 621 aa13.87□□□□□ -0.19
PTPN20-207ENST00000395725 PRKAB2O43741 272 aa13.87□□□□□ -0.19
PTPN20-207ENST00000395725 GUCY1A2P33402 732 aa13.87□□□□□ -0.19
PTPN20-207ENST00000395725 CDK8P49336 464 aa13.87□□□□□ -0.19
PTPN20-207ENST00000395725 COA7Q96BR5 231 aa13.87□□□□□ -0.19
PTPN20-207ENST00000395725 GREB1LQ9C091 1923 aaPredicted RBP13.86□□□□□ -0.19
PTPN20-207ENST00000395725 CATSPERGQ6ZRH7 1159 aa13.86□□□□□ -0.19
PTPN20-207ENST00000395725 CCDC84Q86UT8 332 aaPredicted RBP13.86□□□□□ -0.19
PTPN20-207ENST00000395725 CHD1LQ86WJ1 897 aa13.86□□□□□ -0.19
PTPN20-207ENST00000395725 TRMT44Q8IYL2 757 aaKnown RBP13.86□□□□□ -0.19
PTPN20-207ENST00000395725 FEZ1Q99689 392 aa13.86□□□□□ -0.19
PTPN20-207ENST00000395725 KANSL2Q9H9L4 492 aa13.86□□□□□ -0.19
PTPN20-207ENST00000395725 RABGAP1Q9Y3P9 1069 aa13.86□□□□□ -0.19
PTPN20-207ENST00000395725 PTCH2Q9Y6C5 1203 aa13.86□□□□□ -0.19
PTPN20-207ENST00000395725 SLC3A2P08195 630 aaKnown RBP13.86□□□□□ -0.19
PTPN20-207ENST00000395725 ALX1Q15699 326 aa13.86□□□□□ -0.19
PTPN20-207ENST00000395725 SLC9C1Q4G0N8 1177 aa13.86□□□□□ -0.19
PTPN20-207ENST00000395725 EXOC6Q8TAG9 804 aa13.86□□□□□ -0.19
PTPN20-207ENST00000395725 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.86□□□□□ -0.19
PTPN20-207ENST00000395725 TMX2Q9Y320 296 aa13.86□□□□□ -0.19
PTPN20-207ENST00000395725 ZMYM6O95789 1325 aa13.85□□□□□ -0.19
PTPN20-207ENST00000395725 MAPK4P31152 587 aa13.85□□□□□ -0.19
PTPN20-207ENST00000395725 HERVK_113P62684 666 aa13.85□□□□□ -0.19
PTPN20-207ENST00000395725 GPRC5AQ8NFJ5 357 aa13.85□□□□□ -0.19
PTPN20-207ENST00000395725 UBXN2AP68543 259 aa13.84□□□□□ -0.19
PTPN20-207ENST00000395725 CCNA1P78396 465 aa13.84□□□□□ -0.19
PTPN20-207ENST00000395725 CAP1Q01518 475 aa13.84□□□□□ -0.19
PTPN20-207ENST00000395725 RAB3GAP1Q15042 981 aa13.84□□□□□ -0.19
PTPN20-207ENST00000395725 NKX2-3Q8TAU0 364 aa13.84□□□□□ -0.19
PTPN20-207ENST00000395725 RAET1EQ8TD07 263 aa13.84□□□□□ -0.19
PTPN20-207ENST00000395725 OTUD7AQ8TE49 926 aaPredicted RBP13.84□□□□□ -0.19
PTPN20-207ENST00000395725 TMEM106CQ9BVX2 250 aa13.84□□□□□ -0.19
PTPN20-207ENST00000395725 SUPT16HQ9Y5B9 1047 aaKnown RBP13.84□□□□□ -0.19
PTPN20-207ENST00000395725 HIP1O00291 1037 aa13.84□□□□□ -0.19
PTPN20-207ENST00000395725 TNPO2O14787 897 aaKnown RBP13.84□□□□□ -0.19
PTPN20-207ENST00000395725 CYP2D6P10635 497 aa13.84□□□□□ -0.19
PTPN20-207ENST00000395725 CTGFP29279 349 aa13.84□□□□□ -0.19
PTPN20-207ENST00000395725 MFAP1P55081 439 aaKnown RBP13.84□□□□□ -0.19
PTPN20-207ENST00000395725 SEPT2Q15019 361 aa13.84□□□□□ -0.19
PTPN20-207ENST00000395725 IFNL3Q8IZI9 196 aa13.84□□□□□ -0.19
PTPN20-207ENST00000395725 MB21D1Q8N884 522 aa13.84□□□□□ -0.19
PTPN20-207ENST00000395725 P2RX7Q99572 595 aaKnown RBP13.84□□□□□ -0.19
PTPN20-207ENST00000395725 ARHGAP39Q9C0H5 1083 aa13.84□□□□□ -0.19
PTPN20-207ENST00000395725 HOXC10Q9NYD6 342 aa13.84□□□□□ -0.19
PTPN20-207ENST00000395725 PLIN4Q96Q06 1357 aa13.84□□□□□ -0.19
PTPN20-207ENST00000395725 GRK4P32298 578 aa13.83□□□□□ -0.2
PTPN20-207ENST00000395725 ANKRD13CQ8N6S4 541 aa13.83□□□□□ -0.2
PTPN20-207ENST00000395725 SOCS4Q8WXH5 440 aa13.83□□□□□ -0.2
PTPN20-207ENST00000395725 NYAP2Q9P242 653 aa13.83□□□□□ -0.2
PTPN20-207ENST00000395725 M0R2C6 588 aa13.83□□□□□ -0.2
PTPN20-207ENST00000395725 MPHOSPH10O00566 681 aaKnown RBP13.83□□□□□ -0.2
PTPN20-207ENST00000395725 WDR46O15213 610 aaKnown RBP13.83□□□□□ -0.2
PTPN20-207ENST00000395725 VCAM1P19320 739 aa13.83□□□□□ -0.2
PTPN20-207ENST00000395725 BCL11AQ9H165 835 aa13.83□□□□□ -0.2
PTPN20-207ENST00000395725 VCPKMTQ9H867 229 aa13.83□□□□□ -0.2
PTPN20-207ENST00000395725 ANAPC4Q9UJX5 808 aa13.83□□□□□ -0.2
PTPN20-207ENST00000395725 IGHDP01880 384 aa13.82□□□□□ -0.2
PTPN20-207ENST00000395725 XRCC5P13010 732 aaKnown RBP13.82□□□□□ -0.2
PTPN20-207ENST00000395725 AKR1B1P15121 316 aa13.82□□□□□ -0.2
PTPN20-207ENST00000395725 TDO2P48775 406 aa13.82□□□□□ -0.2
PTPN20-207ENST00000395725 ICA1Q05084 483 aa13.82□□□□□ -0.2
PTPN20-207ENST00000395725 PDE4BQ07343 736 aa13.82□□□□□ -0.2
PTPN20-207ENST00000395725 SLFNL1Q499Z3 407 aa13.82□□□□□ -0.2
PTPN20-207ENST00000395725 TSHZ3Q63HK5 1081 aa13.82□□□□□ -0.2
PTPN20-207ENST00000395725 DYNLL2Q96FJ2 89 aa13.82□□□□□ -0.2
PTPN20-207ENST00000395725 ZSWIM8A7E2V4 1837 aa13.82□□□□□ -0.2
PTPN20-207ENST00000395725 PCP11498 1178 aaKnown RBP13.82□□□□□ -0.2
PTPN20-207ENST00000395725 COG2Q14746 738 aa13.82□□□□□ -0.2
PTPN20-207ENST00000395725 MCMDC2Q4G0Z9 681 aa13.82□□□□□ -0.2
PTPN20-207ENST00000395725 PLEKHM2Q8IWE5 1019 aa13.82□□□□□ -0.2
PTPN20-207ENST00000395725 SHCBP1Q8NEM2 672 aa13.82□□□□□ -0.2
PTPN20-207ENST00000395725 ACER1Q8TDN7 264 aa13.82□□□□□ -0.2
PTPN20-207ENST00000395725 MKL1Q969V6 931 aa13.82□□□□□ -0.2
PTPN20-207ENST00000395725 EPB41L4AQ9HCS5 686 aaPredicted RBP13.82□□□□□ -0.2
PTPN20-207ENST00000395725 GOPCQ9HD26 462 aa13.82□□□□□ -0.2
PTPN20-207ENST00000395725 RBPJLQ9UBG7 517 aa13.82□□□□□ -0.2
PTPN20-207ENST00000395725 A0A0G2JMZ2 1700 aa13.81□□□□□ -0.2
PTPN20-207ENST00000395725 IGKV6D-41A0A0C4DH26 115 aa13.81□□□□□ -0.2
PTPN20-207ENST00000395725 COPB2P35606 906 aa13.81□□□□□ -0.2
PTPN20-207ENST00000395725 ERVK-9P63128 1117 aa13.81□□□□□ -0.2
PTPN20-207ENST00000395725 ERVK-24P63145 666 aa13.81□□□□□ -0.2
PTPN20-207ENST00000395725 PRKCZQ05513 592 aa13.81□□□□□ -0.2
PTPN20-207ENST00000395725 SLC4A8Q2Y0W8 1093 aa13.81□□□□□ -0.2
PTPN20-207ENST00000395725 ZNF444Q8N0Y2 327 aaPredicted RBP13.81□□□□□ -0.2
PTPN20-207ENST00000395725 LNPKQ9C0E8 428 aa13.81□□□□□ -0.2
PTPN20-207ENST00000395725 NAPBQ9H115 298 aa13.81□□□□□ -0.2
PTPN20-207ENST00000395725 MKNK2Q9HBH9 465 aa13.81□□□□□ -0.2
PTPN20-207ENST00000395725 GJD2Q9UKL4 321 aa13.81□□□□□ -0.2
PTPN20-207ENST00000395725 RASA1P20936 1047 aa13.8□□□□□ -0.2
PTPN20-207ENST00000395725 SOX10P56693 466 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms