RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 TMEM47Q9BQJ4 181 aa15.33■□□□□ 0.04
VPS26A-203ENST00000395098 MTMR6Q9Y217 621 aa15.33■□□□□ 0.04
VPS26A-203ENST00000395098 IGKV6D-41A0A0C4DH26 115 aa15.32■□□□□ 0.04
VPS26A-203ENST00000395098 UBE2Q2LH0YL09 131 aa15.32■□□□□ 0.04
VPS26A-203ENST00000395098 H7C1D1 291 aa15.32■□□□□ 0.04
VPS26A-203ENST00000395098 SOCS7O14512 581 aa15.32■□□□□ 0.04
VPS26A-203ENST00000395098 TATDN1Q6P1N9 297 aa15.32■□□□□ 0.04
VPS26A-203ENST00000395098 FAM83AQ86UY5 434 aa15.32■□□□□ 0.04
VPS26A-203ENST00000395098 HACL1Q9UJ83 578 aa15.32■□□□□ 0.04
VPS26A-203ENST00000395098 NOVP48745 357 aa15.32■□□□□ 0.04
VPS26A-203ENST00000395098 RCAN1P53805 252 aa15.32■□□□□ 0.04
VPS26A-203ENST00000395098 JAG1P78504 1218 aa15.32■□□□□ 0.04
VPS26A-203ENST00000395098 HMGN5P82970 282 aaKnown RBP15.32■□□□□ 0.04
VPS26A-203ENST00000395098 CHMP4CQ96CF2 233 aa15.32■□□□□ 0.04
VPS26A-203ENST00000395098 KAT14Q9H8E8 782 aa15.32■□□□□ 0.04
VPS26A-203ENST00000395098 DDAH1O94760 285 aa15.31■□□□□ 0.04
VPS26A-203ENST00000395098 FOSBP53539 338 aa15.31■□□□□ 0.04
VPS26A-203ENST00000395098 HIRAP54198 1017 aaPredicted RBP15.31■□□□□ 0.04
VPS26A-203ENST00000395098 RASA3Q14644 834 aa15.31■□□□□ 0.04
VPS26A-203ENST00000395098 RASGRP2Q7LDG7 609 aa15.31■□□□□ 0.04
VPS26A-203ENST00000395098 PNMA1Q8ND90 353 aa15.31■□□□□ 0.04
VPS26A-203ENST00000395098 MTMR4Q9NYA4 1195 aa15.31■□□□□ 0.04
VPS26A-203ENST00000395098 VPS37CA5D8V6 355 aaPredicted RBP15.31■□□□□ 0.04
VPS26A-203ENST00000395098 MPHOSPH10O00566 681 aaKnown RBP15.31■□□□□ 0.04
VPS26A-203ENST00000395098 CERKLQ49MI3 558 aaPredicted RBP15.31■□□□□ 0.04
VPS26A-203ENST00000395098 CCDC178Q5BJE1 867 aa15.31■□□□□ 0.04
VPS26A-203ENST00000395098 CDC37L1Q7L3B6 337 aa15.31■□□□□ 0.04
VPS26A-203ENST00000395098 CCDC82Q8N4S0 544 aa15.31■□□□□ 0.04
VPS26A-203ENST00000395098 FAM184AQ8NB25 1140 aa15.31■□□□□ 0.04
VPS26A-203ENST00000395098 TRIM34Q9BYJ4 488 aa15.31■□□□□ 0.04
VPS26A-203ENST00000395098 ORC3Q9UBD5 711 aaPredicted RBP15.31■□□□□ 0.04
VPS26A-203ENST00000395098 GDF11O95390 407 aa15.31■□□□□ 0.04
VPS26A-203ENST00000395098 PLEKHA8P1O95397 391 aa15.31■□□□□ 0.04
VPS26A-203ENST00000395098 ZSCAN22P10073 491 aaPredicted RBP15.31■□□□□ 0.04
VPS26A-203ENST00000395098 TEPSINQ96N21 525 aa15.31■□□□□ 0.04
VPS26A-203ENST00000395098 WDR33Q9C0J8 1336 aaKnown RBP15.3■□□□□ 0.04
VPS26A-203ENST00000395098 MIGA2Q7L4E1 593 aa15.3■□□□□ 0.04
VPS26A-203ENST00000395098 NBPF11Q86T75 865 aa15.3■□□□□ 0.04
VPS26A-203ENST00000395098 AIFM3Q96NN9 605 aa15.3■□□□□ 0.04
VPS26A-203ENST00000395098 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.3■□□□□ 0.04
VPS26A-203ENST00000395098 IFNAR1P17181 557 aa15.3■□□□□ 0.04
VPS26A-203ENST00000395098 PDCP20941 246 aa15.3■□□□□ 0.04
VPS26A-203ENST00000395098 FUT2Q10981 343 aa15.3■□□□□ 0.04
VPS26A-203ENST00000395098 CCDC17Q96LX7 622 aa15.3■□□□□ 0.04
VPS26A-203ENST00000395098 GJB4Q9NTQ9 266 aa15.3■□□□□ 0.04
VPS26A-203ENST00000395098 MTMR7Q9Y216 660 aa15.3■□□□□ 0.04
VPS26A-203ENST00000395098 CALM1P0DP23 149 aa15.29■□□□□ 0.04
VPS26A-203ENST00000395098 CALM2P0DP24 149 aa15.29■□□□□ 0.04
VPS26A-203ENST00000395098 CALM3P0DP25 149 aa15.29■□□□□ 0.04
VPS26A-203ENST00000395098 GUCY1A2P33402 732 aa15.29■□□□□ 0.04
VPS26A-203ENST00000395098 NBR1Q14596 966 aa15.29■□□□□ 0.04
VPS26A-203ENST00000395098 ANGEL2Q5VTE6 544 aaKnown RBP15.29■□□□□ 0.04
VPS26A-203ENST00000395098 SLC26A6Q9BXS9 759 aa15.29■□□□□ 0.04
VPS26A-203ENST00000395098 HERC5Q9UII4 1024 aaKnown RBP15.29■□□□□ 0.04
VPS26A-203ENST00000395098 CDKL5O76039 1030 aa15.29■□□□□ 0.04
VPS26A-203ENST00000395098 FOXD4L6Q3SYB3 417 aaPredicted RBP15.29■□□□□ 0.04
VPS26A-203ENST00000395098 OTUD7BQ6GQQ9 843 aa15.29■□□□□ 0.04
VPS26A-203ENST00000395098 FOXD4L3Q6VB84 417 aaPredicted RBP15.29■□□□□ 0.04
VPS26A-203ENST00000395098 STAG2Q8N3U4 1231 aa15.29■□□□□ 0.04
VPS26A-203ENST00000395098 CLIP2Q9UDT6 1046 aa15.29■□□□□ 0.04
VPS26A-203ENST00000395098 CCDC196A0A1B0GTZ2 297 aa15.28■□□□□ 0.04
VPS26A-203ENST00000395098 BAG4O95429 457 aaKnown RBP15.28■□□□□ 0.04
VPS26A-203ENST00000395098 FMNL1O95466 1100 aaPredicted RBP15.28■□□□□ 0.04
VPS26A-203ENST00000395098 F13A1P00488 732 aa15.28■□□□□ 0.04
VPS26A-203ENST00000395098 TOP1P11387 765 aaKnown RBP15.28■□□□□ 0.04
VPS26A-203ENST00000395098 TNNI2P48788 182 aa15.28■□□□□ 0.04
VPS26A-203ENST00000395098 SEPT2Q15019 361 aa15.28■□□□□ 0.04
VPS26A-203ENST00000395098 CPLX2Q6PUV4 134 aaKnown RBP15.28■□□□□ 0.04
VPS26A-203ENST00000395098 FERMT3Q86UX7 667 aa15.28■□□□□ 0.04
VPS26A-203ENST00000395098 LRRC47Q8N1G4 583 aaKnown RBP15.28■□□□□ 0.04
VPS26A-203ENST00000395098 DEFB129Q9H1M3 183 aa15.28■□□□□ 0.04
VPS26A-203ENST00000395098 MYH8P13535 1937 aa15.28■□□□□ 0.04
VPS26A-203ENST00000395098 GREB1LQ9C091 1923 aaPredicted RBP15.28■□□□□ 0.04
VPS26A-203ENST00000395098 GUCY1B3Q02153 619 aa15.28■□□□□ 0.04
VPS26A-203ENST00000395098 TNFAIP1Q13829 316 aa15.28■□□□□ 0.04
VPS26A-203ENST00000395098 ABCB5Q2M3G0 1257 aa15.28■□□□□ 0.04
VPS26A-203ENST00000395098 CLEC17AQ6ZS10 378 aa15.28■□□□□ 0.04
VPS26A-203ENST00000395098 TMTC3Q6ZXV5 915 aa15.28■□□□□ 0.04
VPS26A-203ENST00000395098 SIAH1Q8IUQ4 282 aa15.28■□□□□ 0.04
VPS26A-203ENST00000395098 SRBD1Q8N5C6 995 aaKnown RBP15.28■□□□□ 0.04
VPS26A-203ENST00000395098 CTCFLQ8NI51 663 aaPredicted RBP15.28■□□□□ 0.04
VPS26A-203ENST00000395098 TAOK2Q9UL54 1235 aa15.28■□□□□ 0.04
VPS26A-203ENST00000395098 GRIN3BO60391 1043 aa15.27■□□□□ 0.04
VPS26A-203ENST00000395098 TTLL1O95922 423 aa15.27■□□□□ 0.04
VPS26A-203ENST00000395098 GH2P01242 217 aa15.27■□□□□ 0.04
VPS26A-203ENST00000395098 GRM4Q14833 912 aa15.27■□□□□ 0.04
VPS26A-203ENST00000395098 PPP2R5BQ15173 497 aa15.27■□□□□ 0.04
VPS26A-203ENST00000395098 RBM28Q9NW13 759 aaKnown RBP15.27■□□□□ 0.04
VPS26A-203ENST00000395098 GGA3Q9NZ52 723 aa15.27■□□□□ 0.04
VPS26A-203ENST00000395098 MAD2L2Q9UI95 211 aa15.27■□□□□ 0.04
VPS26A-203ENST00000395098 hCG_1642624A0A1W2PR95 340 aa15.27■□□□□ 0.03
VPS26A-203ENST00000395098 TBC1D12O60347 775 aa15.27■□□□□ 0.03
VPS26A-203ENST00000395098 MCM4P33991 863 aa15.27■□□□□ 0.03
VPS26A-203ENST00000395098 MAP3K10Q02779 954 aa15.27■□□□□ 0.03
VPS26A-203ENST00000395098 SSRP1Q08945 709 aaKnown RBP15.27■□□□□ 0.03
VPS26A-203ENST00000395098 SLC35G1Q2M3R5 365 aa15.27■□□□□ 0.03
VPS26A-203ENST00000395098 PRAMEF18Q5VWM3 479 aa15.27■□□□□ 0.03
VPS26A-203ENST00000395098 GOLGA8HP0CJ92 632 aa15.26■□□□□ 0.03
VPS26A-203ENST00000395098 ATP2B2Q01814 1243 aa15.26■□□□□ 0.03
VPS26A-203ENST00000395098 ALG1Q9BT22 464 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms