RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 KRT71Q3SY84 523 aa13.55□□□□□ -0.24
SIN3A-202ENST00000394947 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.55□□□□□ -0.24
SIN3A-202ENST00000394947 NFATC2IPQ8NCF5 419 aa13.55□□□□□ -0.24
SIN3A-202ENST00000394947 PPP4R1Q8TF05 950 aa13.55□□□□□ -0.24
SIN3A-202ENST00000394947 ALKBH8Q96BT7 664 aaKnown RBP13.55□□□□□ -0.24
SIN3A-202ENST00000394947 HVCN1Q96D96 273 aa13.55□□□□□ -0.24
SIN3A-202ENST00000394947 ZNF594Q96JF6 807 aaPredicted RBP13.55□□□□□ -0.24
SIN3A-202ENST00000394947 LSM14BQ9BX40 385 aaKnown RBP13.55□□□□□ -0.24
SIN3A-202ENST00000394947 TAF5LO75529 589 aa13.55□□□□□ -0.24
SIN3A-202ENST00000394947 MAFGO15525 162 aa13.54□□□□□ -0.24
SIN3A-202ENST00000394947 RRAGAQ7L523 313 aa13.54□□□□□ -0.24
SIN3A-202ENST00000394947 PEX26Q7Z412 305 aa13.54□□□□□ -0.24
SIN3A-202ENST00000394947 INTUQ9ULD6 942 aa13.54□□□□□ -0.24
SIN3A-202ENST00000394947 G3BP2Q9UN86 482 aaKnown RBP13.54□□□□□ -0.24
SIN3A-202ENST00000394947 FAF1Q9UNN5 650 aaPredicted RBP13.54□□□□□ -0.24
SIN3A-202ENST00000394947 EXOC3O60645 756 aa13.54□□□□□ -0.24
SIN3A-202ENST00000394947 UFL1O94874 794 aa13.54□□□□□ -0.24
SIN3A-202ENST00000394947 IGBP1P78318 339 aa13.54□□□□□ -0.24
SIN3A-202ENST00000394947 KLHDC4Q8TBB5 520 aa13.54□□□□□ -0.24
SIN3A-202ENST00000394947 NELFBQ8WX92 580 aa13.54□□□□□ -0.24
SIN3A-202ENST00000394947 PCDHB13Q9Y5F0 798 aa13.54□□□□□ -0.24
SIN3A-202ENST00000394947 C8orf58Q8NAV2 365 aa13.54□□□□□ -0.24
SIN3A-202ENST00000394947 TRPA1O75762 1119 aa13.54□□□□□ -0.24
SIN3A-202ENST00000394947 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.54□□□□□ -0.24
SIN3A-202ENST00000394947 FANCCQ00597 558 aa13.54□□□□□ -0.24
SIN3A-202ENST00000394947 PTPN21Q16825 1174 aa13.54□□□□□ -0.24
SIN3A-202ENST00000394947 HERC4Q5GLZ8 1057 aaPredicted RBP13.54□□□□□ -0.24
SIN3A-202ENST00000394947 FRMPD2Q68DX3 1309 aaPredicted RBP13.54□□□□□ -0.24
SIN3A-202ENST00000394947 CNNM4Q6P4Q7 775 aa13.54□□□□□ -0.24
SIN3A-202ENST00000394947 NSMFQ6X4W1 530 aa13.54□□□□□ -0.24
SIN3A-202ENST00000394947 ACRBPQ8NEB7 543 aa13.54□□□□□ -0.24
SIN3A-202ENST00000394947 NUCKS1Q9H1E3 243 aaKnown RBP13.54□□□□□ -0.24
SIN3A-202ENST00000394947 PCDHB15Q9Y5E8 787 aa13.54□□□□□ -0.24
SIN3A-202ENST00000394947 CLTAP09496 248 aa13.53□□□□□ -0.24
SIN3A-202ENST00000394947 ECE1P42892 770 aa13.53□□□□□ -0.24
SIN3A-202ENST00000394947 TMEM259Q4ZIN3 620 aa13.53□□□□□ -0.24
SIN3A-202ENST00000394947 RAPH1Q70E73 1250 aa13.53□□□□□ -0.24
SIN3A-202ENST00000394947 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.53□□□□□ -0.246e-7■■■□□ 17
SIN3A-202ENST00000394947 SNX29Q8TEQ0 813 aa13.53□□□□□ -0.24
SIN3A-202ENST00000394947 GIGYF1O75420 1035 aaPredicted RBP13.53□□□□□ -0.24
SIN3A-202ENST00000394947 TRAPPC10P48553 1259 aa13.53□□□□□ -0.24
SIN3A-202ENST00000394947 PAK1Q13153 545 aa13.53□□□□□ -0.24
SIN3A-202ENST00000394947 PNOCQ13519 176 aa13.53□□□□□ -0.24
SIN3A-202ENST00000394947 CAPN9O14815 690 aa13.53□□□□□ -0.24
SIN3A-202ENST00000394947 CFAP61Q8NHU2 1237 aa13.53□□□□□ -0.24
SIN3A-202ENST00000394947 CCDC93Q567U6 631 aa13.53□□□□□ -0.24
SIN3A-202ENST00000394947 MAD1L1Q9Y6D9 718 aa13.53□□□□□ -0.24
SIN3A-202ENST00000394947 KLHL30Q0D2K2 578 aa13.53□□□□□ -0.24
SIN3A-202ENST00000394947 CAVIN2O95810 425 aa13.53□□□□□ -0.24
SIN3A-202ENST00000394947 ADCY8P40145 1251 aa13.53□□□□□ -0.24
SIN3A-202ENST00000394947 Q3C1V9 767 aa13.53□□□□□ -0.24
SIN3A-202ENST00000394947 FAM47AQ5JRC9 791 aa13.53□□□□□ -0.24
SIN3A-202ENST00000394947 TEX13AQ9BXU3 409 aaPredicted RBP13.53□□□□□ -0.24
SIN3A-202ENST00000394947 TRIM50Q86XT4 487 aa13.52□□□□□ -0.24
SIN3A-202ENST00000394947 FAM71BQ8TC56 605 aa13.52□□□□□ -0.24
SIN3A-202ENST00000394947 DDX41Q9UJV9 622 aaKnown RBP13.52□□□□□ -0.24
SIN3A-202ENST00000394947 IVNS1ABPQ9Y6Y0 642 aa13.52□□□□□ -0.24
SIN3A-202ENST00000394947 PPFIA2O75334 1257 aa13.52□□□□□ -0.24
SIN3A-202ENST00000394947 CLCN1P35523 988 aa13.52□□□□□ -0.24
SIN3A-202ENST00000394947 TIMM10P62072 90 aa13.52□□□□□ -0.24
SIN3A-202ENST00000394947 SLC9C1Q4G0N8 1177 aa13.52□□□□□ -0.24
SIN3A-202ENST00000394947 GNGT1P63211 74 aa13.52□□□□□ -0.25
SIN3A-202ENST00000394947 M0QZ92 97 aa13.52□□□□□ -0.25
SIN3A-202ENST00000394947 KCNK3O14649 394 aa13.52□□□□□ -0.25
SIN3A-202ENST00000394947 RGS16O15492 202 aaPredicted RBP13.52□□□□□ -0.25
SIN3A-202ENST00000394947 CTNNA1P35221 906 aaKnown RBP13.52□□□□□ -0.25
SIN3A-202ENST00000394947 BLVRAP53004 296 aa13.52□□□□□ -0.25
SIN3A-202ENST00000394947 HABP4Q5JVS0 413 aaKnown RBP13.52□□□□□ -0.25
SIN3A-202ENST00000394947 DESI2Q9BSY9 194 aa13.52□□□□□ -0.25
SIN3A-202ENST00000394947 GNGT2O14610 69 aa13.52□□□□□ -0.25
SIN3A-202ENST00000394947 TMED1Q13445 227 aa13.52□□□□□ -0.25
SIN3A-202ENST00000394947 AZI2Q9H6S1 392 aa13.52□□□□□ -0.25
SIN3A-202ENST00000394947 ITM2BQ9Y287 266 aa13.52□□□□□ -0.25
SIN3A-202ENST00000394947 RTCBQ9Y3I0 505 aaKnown RBP13.52□□□□□ -0.25
SIN3A-202ENST00000394947 GNPATO15228 680 aa13.51□□□□□ -0.25
SIN3A-202ENST00000394947 ARHGAP24Q8N264 748 aa13.51□□□□□ -0.25
SIN3A-202ENST00000394947 EEF2KMTQ96G04 330 aa13.51□□□□□ -0.25
SIN3A-202ENST00000394947 LRGUKQ96M69 825 aa13.51□□□□□ -0.25
SIN3A-202ENST00000394947 PPP1R16BQ96T49 567 aa13.51□□□□□ -0.25
SIN3A-202ENST00000394947 NCAPGQ9BPX3 1015 aa13.51□□□□□ -0.25
SIN3A-202ENST00000394947 POC1B-GALNT4F8VUJ3 575 aa13.51□□□□□ -0.25
SIN3A-202ENST00000394947 ZBTB24O43167 697 aaPredicted RBP13.51□□□□□ -0.25
SIN3A-202ENST00000394947 RASSF2P50749 326 aa13.51□□□□□ -0.25
SIN3A-202ENST00000394947 CALCRLQ16602 461 aa13.51□□□□□ -0.25
SIN3A-202ENST00000394947 KCNH3Q9ULD8 1083 aa13.51□□□□□ -0.25
SIN3A-202ENST00000394947 LIG3P49916 1009 aa13.51□□□□□ -0.25
SIN3A-202ENST00000394947 C2CD5Q86YS7 1000 aa13.51□□□□□ -0.25
SIN3A-202ENST00000394947 KRT82Q9NSB4 513 aa13.51□□□□□ -0.25
SIN3A-202ENST00000394947 KCNA4P22459 653 aa13.51□□□□□ -0.25
SIN3A-202ENST00000394947 SLC9A5Q14940 896 aa13.51□□□□□ -0.25
SIN3A-202ENST00000394947 RPS6KA1Q15418 735 aa13.51□□□□□ -0.25
SIN3A-202ENST00000394947 WHAMMP3Q1A5X7 153 aa13.51□□□□□ -0.25
SIN3A-202ENST00000394947 BAG5Q9UL15 447 aa13.51□□□□□ -0.25
SIN3A-202ENST00000394947 TESPA1A2RU30 521 aaPredicted RBP13.5□□□□□ -0.25
SIN3A-202ENST00000394947 WASLO00401 505 aaPredicted RBP13.5□□□□□ -0.25
SIN3A-202ENST00000394947 SFMBT2Q5VUG0 894 aa13.5□□□□□ -0.25
SIN3A-202ENST00000394947 PIP4K2CQ8TBX8 421 aa13.5□□□□□ -0.25
SIN3A-202ENST00000394947 ATP2A3Q93084 1043 aa13.5□□□□□ -0.25
SIN3A-202ENST00000394947 TOP2AP11388 1531 aaKnown RBP13.5□□□□□ -0.25
SIN3A-202ENST00000394947 NVLO15381 856 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms