RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 NKIRAS1Q9NYS0 192 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 UTP11Q9Y3A2 253 aaKnown RBP11.55□□□□□ -0.56
COL4A6-203ENST00000394872 NEURL1BA8MQ27 555 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 GAS7O60861 476 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 XRCC6P12956 609 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL4A6-203ENST00000394872 ATP2B4P23634 1241 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 GNPTABQ3T906 1256 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 DCPSQ96C86 337 aaKnown RBP11.55□□□□□ -0.56
COL4A6-203ENST00000394872 TBC1D31Q96DN5 1066 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 ANO3Q9BYT9 981 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 VPS54Q9P1Q0 977 aa11.55□□□□□ -0.56
COL4A6-203ENST00000394872 CNGA1P29973 690 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 BEND3Q5T5X7 828 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 RIOK1Q9BRS2 568 aaKnown RBP11.54□□□□□ -0.56
COL4A6-203ENST00000394872 TRPC6Q9Y210 931 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 SMCO2A6NFE2 343 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 BCRP11274 1271 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 P4HA1P13674 534 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 FAM102BQ5T8I3 360 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 UTP14CQ5TAP6 766 aaKnown RBP11.54□□□□□ -0.56
COL4A6-203ENST00000394872 DAAM2Q86T65 1068 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 ARFGAP2Q8N6H7 521 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 HAUS2Q9NVX0 235 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 CTTNBP2NLQ9P2B4 639 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 TCOF1Q13428 1488 aaKnown RBP11.54□□□□□ -0.56
COL4A6-203ENST00000394872 PEG3Q9GZU2 1588 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 ATP7AQ04656 1500 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 TNNI1P19237 187 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 SCNN1DP51172 638 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 NBPF11Q86T75 865 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 DEPTORQ8TB45 409 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 SLC9C1Q4G0N8 1177 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 ALAS1P13196 640 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 KRT40Q6A162 431 aa11.54□□□□□ -0.56
COL4A6-203ENST00000394872 SGSM2O43147 1006 aa11.53□□□□□ -0.56
COL4A6-203ENST00000394872 PPP2R3AQ06190 1150 aa11.53□□□□□ -0.56
COL4A6-203ENST00000394872 DCAF15Q66K64 600 aa11.53□□□□□ -0.56
COL4A6-203ENST00000394872 NELFBQ8WX92 580 aa11.53□□□□□ -0.56
COL4A6-203ENST00000394872 NAPGQ99747 312 aaPredicted RBP11.53□□□□□ -0.56
COL4A6-203ENST00000394872 RNF169Q8NCN4 708 aa11.53□□□□□ -0.56
COL4A6-203ENST00000394872 MED10Q9BTT4 135 aa11.53□□□□□ -0.56
COL4A6-203ENST00000394872 E7EWF7 191 aa11.53□□□□□ -0.56
COL4A6-203ENST00000394872 ACTN4O43707 911 aaKnown RBP11.53□□□□□ -0.56
COL4A6-203ENST00000394872 POSTNQ15063 836 aa11.53□□□□□ -0.56
COL4A6-203ENST00000394872 VPS52Q8N1B4 723 aa11.53□□□□□ -0.56
COL4A6-203ENST00000394872 FAM76AQ8TAV0 307 aa11.53□□□□□ -0.56
COL4A6-203ENST00000394872 TTLL3Q9Y4R7 772 aa11.53□□□□□ -0.56
COL4A6-203ENST00000394872 ZNF202O95125 648 aa11.53□□□□□ -0.56
COL4A6-203ENST00000394872 HDXQ7Z353 690 aa11.53□□□□□ -0.56
COL4A6-203ENST00000394872 ZNF710Q8N1W2 664 aa11.53□□□□□ -0.56
COL4A6-203ENST00000394872 BLZF1Q9H2G9 400 aa11.53□□□□□ -0.56
COL4A6-203ENST00000394872 TAB2Q9NYJ8 693 aa11.53□□□□□ -0.56
COL4A6-203ENST00000394872 ARHGEF12Q9NZN5 1544 aa11.53□□□□□ -0.56
COL4A6-203ENST00000394872 GYG1P46976 350 aa11.52□□□□□ -0.56
COL4A6-203ENST00000394872 NLRP12P59046 1061 aa11.52□□□□□ -0.56
COL4A6-203ENST00000394872 EP400NLQ6ZTU2 488 aa11.52□□□□□ -0.56
COL4A6-203ENST00000394872 GPIHBP1Q8IV16 184 aa11.52□□□□□ -0.56
COL4A6-203ENST00000394872 MLKLQ8NB16 471 aa11.52□□□□□ -0.56
COL4A6-203ENST00000394872 TRIM35Q9UPQ4 493 aa11.52□□□□□ -0.56
COL4A6-203ENST00000394872 KDM3AQ9Y4C1 1321 aa11.52□□□□□ -0.56
COL4A6-203ENST00000394872 FANCCQ00597 558 aa11.52□□□□□ -0.56
COL4A6-203ENST00000394872 PABPC4Q13310 644 aaKnown RBP eCLIP11.52□□□□□ -0.56
COL4A6-203ENST00000394872 KIAA0825Q8IV33 1275 aa11.52□□□□□ -0.56
COL4A6-203ENST00000394872 RDH13Q8NBN7 331 aa11.52□□□□□ -0.56
COL4A6-203ENST00000394872 ATP8A2Q9NTI2 1148 aa11.52□□□□□ -0.56
COL4A6-203ENST00000394872 MYO1AQ9UBC5 1043 aa11.52□□□□□ -0.56
COL4A6-203ENST00000394872 CD2APQ9Y5K6 639 aa11.52□□□□□ -0.56
COL4A6-203ENST00000394872 PPP2R5CQ13362 524 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 INTS8Q75QN2 995 aaKnown RBP11.52□□□□□ -0.57
COL4A6-203ENST00000394872 NCAPG2Q86XI2 1143 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 DSCC1Q9BVC3 393 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 CLSTN2Q9H4D0 955 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 KCNG1Q9UIX4 513 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 USP17L12C9JPN9 530 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 USP17L21D6R901 530 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 ZBTB24O43167 697 aaPredicted RBP11.52□□□□□ -0.57
COL4A6-203ENST00000394872 TUBBP07437 444 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 YWHAEP62258 255 aaKnown RBP11.52□□□□□ -0.57
COL4A6-203ENST00000394872 CERKLQ49MI3 558 aaPredicted RBP11.52□□□□□ -0.57
COL4A6-203ENST00000394872 C8orf74Q6P047 294 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 MICALL1Q8N3F8 863 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 EBAG9O00559 213 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 GIPC1O14908 333 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 HSPA1LP34931 641 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 ARHGAP44Q17R89 818 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 SULF1Q8IWU6 871 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 GSDMBQ8TAX9 411 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 SECISBP2LQ93073 1101 aaKnown RBP11.52□□□□□ -0.57
COL4A6-203ENST00000394872 NT5C3AQ9H0P0 336 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 PHKG2P15735 406 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 LRMPQ12912 555 aa11.52□□□□□ -0.57
COL4A6-203ENST00000394872 ZSCAN10Q96SZ4 725 aaPredicted RBP11.52□□□□□ -0.57
COL4A6-203ENST00000394872 MKRN1Q9UHC7 482 aaKnown RBP11.52□□□□□ -0.57
COL4A6-203ENST00000394872 NOL3O60936 208 aaKnown RBP11.51□□□□□ -0.57
COL4A6-203ENST00000394872 NR1I2O75469 434 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 SEC24BO95487 1268 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 VIMP08670 466 aaKnown RBP11.51□□□□□ -0.57
COL4A6-203ENST00000394872 POLR2MP0CAP2 368 aa11.51□□□□□ -0.57
COL4A6-203ENST00000394872 YARSP54577 528 aaKnown RBP11.51□□□□□ -0.57
COL4A6-203ENST00000394872 MRPL11Q9Y3B7 192 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms