RNA–Protein interactions for RNA: ENST00000394800.6

MATR3-230, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-230ENST00000394800 SPC25Q9HBM1 224 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 TMCC3Q9ULS5 477 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 ITM2BQ9Y287 266 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 DAAM1Q9Y4D1 1078 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.58□□□□□ -1.36
MATR3-230ENST00000394800 SPEF2Q9C093 1822 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 BAZ2BQ9UIF8 2168 aaKnown RBP6.58□□□□□ -1.36
MATR3-230ENST00000394800 ANKRD18BA2A2Z9 1011 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 UBAP1LF5GYI3 381 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 SMC2O95347 1197 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 TBC1D8O95759 1140 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 F13A1P00488 732 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 ZNF445P59923 1031 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 RBBP5Q15291 538 aaKnown RBP6.58□□□□□ -1.36
MATR3-230ENST00000394800 DNAJC21Q5F1R6 531 aaKnown RBP6.58□□□□□ -1.36
MATR3-230ENST00000394800 FKBP15Q5T1M5 1219 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 ANKRD42Q8N9B4 389 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 PPP1R14CQ8TAE6 165 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 NOL10Q9BSC4 688 aaKnown RBP6.58□□□□□ -1.36
MATR3-230ENST00000394800 RBSNQ9H1K0 784 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 HMG20BQ9P0W2 317 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 SART1O43290 800 aaKnown RBP6.58□□□□□ -1.36
MATR3-230ENST00000394800 FGAP02671 866 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 TBC1D10BQ4KMP7 808 aaPredicted RBP6.58□□□□□ -1.36
MATR3-230ENST00000394800 CCDC102BQ68D86 513 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 LINC00116Q8NCU8 138 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 SH2B1Q9NRF2 756 aaPredicted RBP6.58□□□□□ -1.36
MATR3-230ENST00000394800 NIP7Q9Y221 180 aaKnown RBP eCLIP6.58□□□□□ -1.361e-323■■□□□ 14.4
MATR3-230ENST00000394800 DDX60Q8IY21 1712 aaKnown RBP6.58□□□□□ -1.36
MATR3-230ENST00000394800 E7EWF7 191 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 CTAGE5O15320 804 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 TOM1O60784 492 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 NTSR2O95665 410 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 RHOXF2BP0C7M4 288 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 PSMA5P28066 241 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 POU5F1Q01860 360 aaKnown RBP6.58□□□□□ -1.36
MATR3-230ENST00000394800 CCDC158Q5M9N0 1113 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 TTC39AQ5SRH9 613 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 SLC51AQ86UW1 340 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 USP33Q8TEY7 942 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 GPR101Q96P66 508 aaPredicted RBP6.58□□□□□ -1.36
MATR3-230ENST00000394800 RHOXF2Q9BQY4 288 aa6.58□□□□□ -1.36
MATR3-230ENST00000394800 NCOA5Q9HCD5 579 aaKnown RBP6.58□□□□□ -1.36
MATR3-230ENST00000394800 RRAGDQ9NQL2 400 aaPredicted RBP6.58□□□□□ -1.36
MATR3-230ENST00000394800 PIH1D3Q9NQM4 214 aaKnown RBP6.58□□□□□ -1.36
MATR3-230ENST00000394800 FGFR2P21802 821 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 NASPP49321 788 aaPredicted RBP6.57□□□□□ -1.36
MATR3-230ENST00000394800 WASHC4Q2M389 1173 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 MAP7D1Q3KQU3 841 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 BARGINQ6ZT62 677 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 HOOK3Q86VS8 718 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 LRRC43Q8N309 656 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 CCDC24Q8N4L8 307 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 DPF3Q92784 378 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 DDX11Q96FC9 970 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 CDCA7Q9BWT1 371 aaPredicted RBP6.57□□□□□ -1.36
MATR3-230ENST00000394800 VRTNQ9H8Y1 702 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 HELLSQ9NRZ9 838 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 AKAP2Q9Y2D5 859 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 COL4A3BPQ9Y5P4 624 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 ARPC4-TTLL3A0A0A6YYG9 625 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 MAPK9P45984 424 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 WWC2Q6AWC2 1192 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 LLGL2Q6P1M3 1020 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 ZNF280CQ8ND82 737 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 HELQQ8TDG4 1101 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 GNL3LQ9NVN8 582 aaKnown RBP6.57□□□□□ -1.36
MATR3-230ENST00000394800 SATB2Q9UPW6 733 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 CTDNEP1O95476 244 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 MRPS35P82673 323 aaKnown RBP6.57□□□□□ -1.36
MATR3-230ENST00000394800 EXOSC10Q01780 885 aaKnown RBP6.57□□□□□ -1.36
MATR3-230ENST00000394800 APOBRQ0VD83 1088 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 SCRN1Q12765 414 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 LARP1BQ659C4 914 aaKnown RBP6.57□□□□□ -1.36
MATR3-230ENST00000394800 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.57□□□□□ -1.364e-16■■□□□ 14.4
MATR3-230ENST00000394800 ZSCAN31Q96LW9 406 aaPredicted RBP6.57□□□□□ -1.36
MATR3-230ENST00000394800 DSCC1Q9BVC3 393 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 TRIM55Q9BYV6 548 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 GEMIN8Q9NWZ8 242 aaKnown RBP6.57□□□□□ -1.36
MATR3-230ENST00000394800 CCDC194A0A1B0GVG4 234 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 CCDC144BQ3MJ40 725 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 CCDC40Q4G0X9 1142 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 TTC30AQ86WT1 665 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.57□□□□□ -1.36
MATR3-230ENST00000394800 TRIM5Q9C035 493 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 GPAA1O43292 621 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 TIPRLO75663 272 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 C21orf62-AS1Q17RA5 79 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 SLC9C2Q5TAH2 1124 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 TTC6Q86TZ1 520 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 ANKRD18AQ8IVF6 992 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 RNF217Q8TC41 542 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 GTF3C6Q969F1 213 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 BCL2L12Q9HB09 334 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 CFAP45Q9UL16 551 aa6.57□□□□□ -1.36
MATR3-230ENST00000394800 EIF3JO75822 258 aaKnown RBP6.56□□□□□ -1.36
MATR3-230ENST00000394800 IDH1O75874 414 aaKnown RBP6.56□□□□□ -1.36
MATR3-230ENST00000394800 CHRM1P11229 460 aaPredicted RBP6.56□□□□□ -1.36
MATR3-230ENST00000394800 MAPK1P28482 360 aa6.56□□□□□ -1.36
MATR3-230ENST00000394800 CCT2P78371 535 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms