RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 HELLSQ9NRZ9 838 aa10.24□□□□□ -0.77
APLF-202ENST00000394342 AGTPBP1Q9UPW5 1226 aa10.24□□□□□ -0.77
APLF-202ENST00000394342 ADGRA2Q96PE1 1338 aa10.24□□□□□ -0.77
APLF-202ENST00000394342 ROBO3Q96MS0 1386 aa10.24□□□□□ -0.77
APLF-202ENST00000394342 PLXNA1Q9UIW2 1896 aa10.23□□□□□ -0.77
APLF-202ENST00000394342 CYP2D7A0A087X1C5 515 aa10.23□□□□□ -0.77
APLF-202ENST00000394342 USP17L10C9JJH3 530 aa10.23□□□□□ -0.77
APLF-202ENST00000394342 TDO2P48775 406 aa10.23□□□□□ -0.77
APLF-202ENST00000394342 CDK8P49336 464 aa10.23□□□□□ -0.77
APLF-202ENST00000394342 HMGCS2P54868 508 aa10.23□□□□□ -0.77
APLF-202ENST00000394342 EVX2Q03828 476 aa10.23□□□□□ -0.77
APLF-202ENST00000394342 PABPC4Q13310 644 aaKnown RBP eCLIP10.23□□□□□ -0.77
APLF-202ENST00000394342 PKN2Q16513 984 aaKnown RBP10.23□□□□□ -0.77
APLF-202ENST00000394342 SHROOM1Q2M3G4 852 aaPredicted RBP10.23□□□□□ -0.77
APLF-202ENST00000394342 RILPL2Q969X0 211 aa10.23□□□□□ -0.77
APLF-202ENST00000394342 DYNLL2Q96FJ2 89 aa10.23□□□□□ -0.77
APLF-202ENST00000394342 CCDC17Q96LX7 622 aa10.23□□□□□ -0.77
APLF-202ENST00000394342 NACAP1Q9BZK3 213 aa10.23□□□□□ -0.77
APLF-202ENST00000394342 MCOLN1Q9GZU1 580 aa10.23□□□□□ -0.77
APLF-202ENST00000394342 EPB41L4AQ9HCS5 686 aaPredicted RBP10.23□□□□□ -0.77
APLF-202ENST00000394342 PNMA3Q9UL41 463 aa10.23□□□□□ -0.77
APLF-202ENST00000394342 A0A0G2JMZ2 1700 aa10.23□□□□□ -0.77
APLF-202ENST00000394342 PDE4DIPQ5VU43 2346 aa10.23□□□□□ -0.77
APLF-202ENST00000394342 APPP05067 770 aa10.22□□□□□ -0.77
APLF-202ENST00000394342 PDE4AP27815 886 aa10.22□□□□□ -0.77
APLF-202ENST00000394342 GUCY1A2P33402 732 aa10.22□□□□□ -0.77
APLF-202ENST00000394342 USP14P54578 494 aa10.22□□□□□ -0.77
APLF-202ENST00000394342 MTMR2Q13614 643 aa10.22□□□□□ -0.77
APLF-202ENST00000394342 RAB3GAP1Q15042 981 aa10.22□□□□□ -0.77
APLF-202ENST00000394342 ARHGEF6Q15052 776 aa10.22□□□□□ -0.77
APLF-202ENST00000394342 MCMDC2Q4G0Z9 681 aa10.22□□□□□ -0.77
APLF-202ENST00000394342 TREML2Q5T2D2 321 aa10.22□□□□□ -0.77
APLF-202ENST00000394342 IFFO2Q5TF58 517 aa10.22□□□□□ -0.77
APLF-202ENST00000394342 USP17L2Q6R6M4 530 aa10.22□□□□□ -0.77
APLF-202ENST00000394342 C17orf99Q6UX52 265 aa10.22□□□□□ -0.77
APLF-202ENST00000394342 TMEM179Q6ZVK1 233 aa10.22□□□□□ -0.77
APLF-202ENST00000394342 IFNL3Q8IZI9 196 aa10.22□□□□□ -0.77
APLF-202ENST00000394342 SLC44A5Q8NCS7 719 aa10.22□□□□□ -0.77
APLF-202ENST00000394342 CD99L2Q8TCZ2 262 aa10.22□□□□□ -0.77
APLF-202ENST00000394342 BBXQ8WY36 941 aaPredicted RBP10.22□□□□□ -0.77
APLF-202ENST00000394342 TMOD4Q9NZQ9 345 aa10.22□□□□□ -0.77
APLF-202ENST00000394342 SMCHD1A6NHR9 2005 aa10.21□□□□□ -0.77
APLF-202ENST00000394342 A0A0D9SFI3 127 aa10.21□□□□□ -0.77
APLF-202ENST00000394342 MINDY4BA8MYZ0 360 aa10.21□□□□□ -0.77
APLF-202ENST00000394342 HAX1O00165 279 aa10.21□□□□□ -0.77
APLF-202ENST00000394342 HIP1O00291 1037 aa10.21□□□□□ -0.77
APLF-202ENST00000394342 MPHOSPH10O00566 681 aaKnown RBP10.21□□□□□ -0.77
APLF-202ENST00000394342 BCRP11274 1271 aa10.21□□□□□ -0.77
APLF-202ENST00000394342 PRKAR2AP13861 404 aaKnown RBP10.21□□□□□ -0.77
APLF-202ENST00000394342 OSBPP22059 807 aa10.21□□□□□ -0.77
APLF-202ENST00000394342 HOXA7P31268 230 aaPredicted RBP10.21□□□□□ -0.77
APLF-202ENST00000394342 MFAP1P55081 439 aaKnown RBP10.21□□□□□ -0.77
APLF-202ENST00000394342 SEPT2Q15019 361 aa10.21□□□□□ -0.77
APLF-202ENST00000394342 ALX1Q15699 326 aa10.21□□□□□ -0.77
APLF-202ENST00000394342 TTC22Q5TAA0 569 aa10.21□□□□□ -0.77
APLF-202ENST00000394342 CCDC129Q6ZRS4 1044 aa10.21□□□□□ -0.77
APLF-202ENST00000394342 C12orf42Q96LP6 360 aa10.21□□□□□ -0.77
APLF-202ENST00000394342 FEZ1Q99689 392 aa10.21□□□□□ -0.77
APLF-202ENST00000394342 KIAA1683Q9H0B3 1180 aa10.21□□□□□ -0.77
APLF-202ENST00000394342 NAPBQ9H115 298 aa10.21□□□□□ -0.77
APLF-202ENST00000394342 ZNF287Q9HBT7 754 aa10.21□□□□□ -0.77
APLF-202ENST00000394342 TNRC18O15417 2968 aaPredicted RBP10.21□□□□□ -0.78
APLF-202ENST00000394342 MKI67P46013 3256 aaKnown RBP10.2□□□□□ -0.78
APLF-202ENST00000394342 SMIM22K7EJ46 135 aa10.2□□□□□ -0.78
APLF-202ENST00000394342 ZMYM6O95789 1325 aa10.2□□□□□ -0.78
APLF-202ENST00000394342 GNRH1P01148 92 aa10.2□□□□□ -0.78
APLF-202ENST00000394342 SLC3A2P08195 630 aaKnown RBP10.2□□□□□ -0.78
APLF-202ENST00000394342 PRR29P0C7W0 189 aa10.2□□□□□ -0.78
APLF-202ENST00000394342 CYP2C8P10632 490 aa10.2□□□□□ -0.78
APLF-202ENST00000394342 AKR1B1P15121 316 aa10.2□□□□□ -0.78
APLF-202ENST00000394342 SDSP20132 328 aa10.2□□□□□ -0.78
APLF-202ENST00000394342 LACTBP83111 547 aaPredicted RBP10.2□□□□□ -0.78
APLF-202ENST00000394342 NMIQ13287 307 aaPredicted RBP10.2□□□□□ -0.78
APLF-202ENST00000394342 KIF22Q14807 665 aa10.2□□□□□ -0.78
APLF-202ENST00000394342 FBXO46Q6PJ61 603 aaPredicted RBP10.2□□□□□ -0.78
APLF-202ENST00000394342 CCDC171Q6TFL3 1326 aa10.2□□□□□ -0.78
APLF-202ENST00000394342 CENPQQ7L2Z9 268 aaPredicted RBP10.2□□□□□ -0.78
APLF-202ENST00000394342 OTOP1Q7RTM1 612 aa10.2□□□□□ -0.78
APLF-202ENST00000394342 SMCR8Q8TEV9 937 aaPredicted RBP10.2□□□□□ -0.78
APLF-202ENST00000394342 ABHD8Q96I13 439 aa10.2□□□□□ -0.78
APLF-202ENST00000394342 FAM227BQ96M60 508 aa10.2□□□□□ -0.78
APLF-202ENST00000394342 EFCC1Q9HA90 598 aa10.2□□□□□ -0.78
APLF-202ENST00000394342 MKNK2Q9HBH9 465 aa10.2□□□□□ -0.78
APLF-202ENST00000394342 EMILIN3Q9NT22 766 aa10.2□□□□□ -0.78
APLF-202ENST00000394342 CPA4Q9UI42 421 aa10.2□□□□□ -0.78
APLF-202ENST00000394342 TRIM17Q9Y577 477 aa10.2□□□□□ -0.78
APLF-202ENST00000394342 FOXP2O15409 715 aa10.19□□□□□ -0.78
APLF-202ENST00000394342 RASA1P20936 1047 aa10.19□□□□□ -0.78
APLF-202ENST00000394342 GCLCP48506 637 aaPredicted RBP10.19□□□□□ -0.78
APLF-202ENST00000394342 IRX3P78415 501 aaPredicted RBP10.19□□□□□ -0.78
APLF-202ENST00000394342 ICA1Q05084 483 aa10.19□□□□□ -0.78
APLF-202ENST00000394342 PDE4BQ07343 736 aa10.19□□□□□ -0.78
APLF-202ENST00000394342 PPARAQ07869 468 aa10.19□□□□□ -0.78
APLF-202ENST00000394342 ACER1Q8TDN7 264 aa10.19□□□□□ -0.78
APLF-202ENST00000394342 ASCC2Q9H1I8 757 aaPredicted RBP10.19□□□□□ -0.78
APLF-202ENST00000394342 SH2D4AQ9H788 454 aa10.19□□□□□ -0.78
APLF-202ENST00000394342 ARHGEF10LQ9HCE6 1279 aa10.19□□□□□ -0.78
APLF-202ENST00000394342 DIAPH3Q9NSV4 1193 aa10.19□□□□□ -0.78
APLF-202ENST00000394342 MCM3APO60318 1980 aa10.19□□□□□ -0.78
APLF-202ENST00000394342 PLIN4Q96Q06 1357 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms