RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 DDTLA6NHG4 134 aaPredicted RBP13.41□□□□□ -0.26
VTI1BP2-201ENST00000394154 KBTBD13C9JR72 458 aa13.41□□□□□ -0.26
VTI1BP2-201ENST00000394154 PDE8BO95263 885 aa13.41□□□□□ -0.26
VTI1BP2-201ENST00000394154 CNGA1P29973 690 aa13.41□□□□□ -0.26
VTI1BP2-201ENST00000394154 TMEM31Q5JXX7 168 aa13.41□□□□□ -0.26
VTI1BP2-201ENST00000394154 PLEKHH3Q7Z736 793 aa13.41□□□□□ -0.26
VTI1BP2-201ENST00000394154 ALYREFQ86V81 257 aaKnown RBP13.41□□□□□ -0.26
VTI1BP2-201ENST00000394154 ARRDC4Q8NCT1 418 aa13.41□□□□□ -0.26
VTI1BP2-201ENST00000394154 TRIM43Q96BQ3 446 aaPredicted RBP13.41□□□□□ -0.26
VTI1BP2-201ENST00000394154 KIF1BPQ96EK5 621 aa13.41□□□□□ -0.26
VTI1BP2-201ENST00000394154 NECAB3Q96P71 396 aaPredicted RBP13.41□□□□□ -0.26
VTI1BP2-201ENST00000394154 OSBPL5Q9H0X9 879 aaPredicted RBP13.41□□□□□ -0.26
VTI1BP2-201ENST00000394154 TXNRD2Q9NNW7 524 aa13.41□□□□□ -0.26
VTI1BP2-201ENST00000394154 COPRSQ9NQ92 184 aa13.41□□□□□ -0.26
VTI1BP2-201ENST00000394154 SMARCA5O60264 1052 aaPredicted RBP13.4□□□□□ -0.26
VTI1BP2-201ENST00000394154 TBC1D12O60347 775 aa13.4□□□□□ -0.26
VTI1BP2-201ENST00000394154 LDHBP07195 334 aaKnown RBP13.4□□□□□ -0.26
VTI1BP2-201ENST00000394154 IFIT1P09914 478 aaKnown RBP13.4□□□□□ -0.26
VTI1BP2-201ENST00000394154 SLURP2P0DP57 97 aa13.4□□□□□ -0.26
VTI1BP2-201ENST00000394154 PDE4AP27815 886 aa13.4□□□□□ -0.26
VTI1BP2-201ENST00000394154 PRDX5P30044 214 aa13.4□□□□□ -0.26
VTI1BP2-201ENST00000394154 HOXA7P31268 230 aaPredicted RBP13.4□□□□□ -0.26
VTI1BP2-201ENST00000394154 HERVK_113P62684 666 aa13.4□□□□□ -0.26
VTI1BP2-201ENST00000394154 ERVK-9P63128 1117 aa13.4□□□□□ -0.26
VTI1BP2-201ENST00000394154 ERVK-24P63145 666 aa13.4□□□□□ -0.26
VTI1BP2-201ENST00000394154 MAP2K5Q13163 448 aa13.4□□□□□ -0.26
VTI1BP2-201ENST00000394154 SH3RF1Q7Z6J0 888 aa13.4□□□□□ -0.26
VTI1BP2-201ENST00000394154 VGLL2Q8N8G2 317 aa13.4□□□□□ -0.26
VTI1BP2-201ENST00000394154 TSPYL2Q9H2G4 693 aaPredicted RBP13.4□□□□□ -0.26
VTI1BP2-201ENST00000394154 CWC22Q9HCG8 908 aaKnown RBP13.4□□□□□ -0.26
VTI1BP2-201ENST00000394154 PA2G4Q9UQ80 394 aaKnown RBP13.4□□□□□ -0.26
VTI1BP2-201ENST00000394154 RFX5P48382 616 aaPredicted RBP13.39□□□□□ -0.27
VTI1BP2-201ENST00000394154 EPHB4P54760 987 aa13.39□□□□□ -0.27
VTI1BP2-201ENST00000394154 GJC2Q5T442 439 aaPredicted RBP13.39□□□□□ -0.27
VTI1BP2-201ENST00000394154 C1orf53Q5VUE5 145 aa13.39□□□□□ -0.27
VTI1BP2-201ENST00000394154 RHPN1Q8TCX5 695 aa13.39□□□□□ -0.27
VTI1BP2-201ENST00000394154 GTF3C2Q8WUA4 911 aaPredicted RBP13.39□□□□□ -0.27
VTI1BP2-201ENST00000394154 EDC3Q96F86 508 aaKnown RBP13.39□□□□□ -0.27
VTI1BP2-201ENST00000394154 P2RX7Q99572 595 aaKnown RBP13.39□□□□□ -0.27
VTI1BP2-201ENST00000394154 BCL11AQ9H165 835 aa13.39□□□□□ -0.27
VTI1BP2-201ENST00000394154 PORCNQ9H237 461 aa13.39□□□□□ -0.27
VTI1BP2-201ENST00000394154 PRDM12Q9H4Q4 367 aa13.39□□□□□ -0.27
VTI1BP2-201ENST00000394154 AS3MTQ9HBK9 375 aa13.39□□□□□ -0.27
VTI1BP2-201ENST00000394154 CXXC1Q9P0U4 656 aaPredicted RBP13.39□□□□□ -0.27
VTI1BP2-201ENST00000394154 TACC3Q9Y6A5 838 aa13.39□□□□□ -0.27
VTI1BP2-201ENST00000394154 TCF20Q9UGU0 1960 aaKnown RBP13.39□□□□□ -0.27
VTI1BP2-201ENST00000394154 MYH2Q9UKX2 1941 aa13.39□□□□□ -0.27
VTI1BP2-201ENST00000394154 USP17L5A8MUK1 530 aa13.38□□□□□ -0.27
VTI1BP2-201ENST00000394154 PEX10O60683 326 aa13.38□□□□□ -0.27
VTI1BP2-201ENST00000394154 GLRX3O76003 335 aaKnown RBP13.38□□□□□ -0.27
VTI1BP2-201ENST00000394154 BMP1P13497 986 aa13.38□□□□□ -0.27
VTI1BP2-201ENST00000394154 PUM3Q15397 648 aaKnown RBP13.38□□□□□ -0.27
VTI1BP2-201ENST00000394154 CCDC85BQ15834 202 aaPredicted RBP13.38□□□□□ -0.27
VTI1BP2-201ENST00000394154 AAK1Q2M2I8 961 aa13.38□□□□□ -0.27
VTI1BP2-201ENST00000394154 LRRC24Q50LG9 513 aa13.38□□□□□ -0.27
VTI1BP2-201ENST00000394154 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.38□□□□□ -0.27
VTI1BP2-201ENST00000394154 TMOD4Q9NZQ9 345 aa13.38□□□□□ -0.27
VTI1BP2-201ENST00000394154 FLRT1Q9NZU1 646 aa13.38□□□□□ -0.27
VTI1BP2-201ENST00000394154 RBPJLQ9UBG7 517 aa13.38□□□□□ -0.27
VTI1BP2-201ENST00000394154 ATP2B2Q01814 1243 aa13.37□□□□□ -0.27
VTI1BP2-201ENST00000394154 FPGSQ05932 587 aa13.37□□□□□ -0.27
VTI1BP2-201ENST00000394154 SIL1Q9H173 461 aa13.37□□□□□ -0.27
VTI1BP2-201ENST00000394154 EPHX3Q9H6B9 360 aa13.37□□□□□ -0.27
VTI1BP2-201ENST00000394154 FBXO3Q9UK99 471 aa13.37□□□□□ -0.27
VTI1BP2-201ENST00000394154 XIRP2A4UGR9 3374 aa13.37□□□□□ -0.27
VTI1BP2-201ENST00000394154 GAKO14976 1311 aa13.37□□□□□ -0.27
VTI1BP2-201ENST00000394154 SALL1Q9NSC2 1324 aa13.37□□□□□ -0.27
VTI1BP2-201ENST00000394154 MUC6Q6W4X9 2439 aa13.37□□□□□ -0.27
VTI1BP2-201ENST00000394154 CLTBP09497 229 aa13.36□□□□□ -0.27
VTI1BP2-201ENST00000394154 RAG1P15918 1043 aa13.36□□□□□ -0.27
VTI1BP2-201ENST00000394154 FGFR2P21802 821 aa13.36□□□□□ -0.27
VTI1BP2-201ENST00000394154 IGFBP4P22692 258 aa13.36□□□□□ -0.27
VTI1BP2-201ENST00000394154 ITGB8P26012 769 aa13.36□□□□□ -0.27
VTI1BP2-201ENST00000394154 CAP2P40123 477 aa13.36□□□□□ -0.27
VTI1BP2-201ENST00000394154 TLE2Q04725 743 aa13.36□□□□□ -0.27
VTI1BP2-201ENST00000394154 PICALMQ13492 652 aa13.36□□□□□ -0.27
VTI1BP2-201ENST00000394154 MTMR2Q13614 643 aa13.36□□□□□ -0.27
VTI1BP2-201ENST00000394154 Q3C1V9 767 aa13.36□□□□□ -0.27
VTI1BP2-201ENST00000394154 PLEKHM2Q8IWE5 1019 aa13.36□□□□□ -0.27
VTI1BP2-201ENST00000394154 CLASRPQ8N2M8 674 aaKnown RBP13.36□□□□□ -0.27
VTI1BP2-201ENST00000394154 KLHDC4Q8TBB5 520 aa13.36□□□□□ -0.27
VTI1BP2-201ENST00000394154 PAGR1Q9BTK6 254 aa13.36□□□□□ -0.27
VTI1BP2-201ENST00000394154 IL1RAPL2Q9NP60 686 aa13.36□□□□□ -0.27
VTI1BP2-201ENST00000394154 DDX4Q9NQI0 724 aaKnown RBP13.36□□□□□ -0.27
VTI1BP2-201ENST00000394154 PLXNA1Q9UIW2 1896 aa13.36□□□□□ -0.27
VTI1BP2-201ENST00000394154 FAM196BA6NMK8 535 aa13.35□□□□□ -0.27
VTI1BP2-201ENST00000394154 EYA2O00167 538 aa13.35□□□□□ -0.27
VTI1BP2-201ENST00000394154 KIAA0355O15063 1070 aa13.35□□□□□ -0.27
VTI1BP2-201ENST00000394154 GPR37L1O60883 481 aa13.35□□□□□ -0.27
VTI1BP2-201ENST00000394154 CIAO1O76071 339 aa13.35□□□□□ -0.27
VTI1BP2-201ENST00000394154 CYBAP13498 195 aa13.35□□□□□ -0.27
VTI1BP2-201ENST00000394154 SLC5A1P13866 664 aa13.35□□□□□ -0.27
VTI1BP2-201ENST00000394154 IL15P40933 162 aaPredicted RBP13.35□□□□□ -0.27
VTI1BP2-201ENST00000394154 ADCYAP1R1P41586 468 aa13.35□□□□□ -0.27
VTI1BP2-201ENST00000394154 BACE1P56817 501 aa13.35□□□□□ -0.27
VTI1BP2-201ENST00000394154 CCNA1P78396 465 aa13.35□□□□□ -0.27
VTI1BP2-201ENST00000394154 ADGRE1Q14246 886 aa13.35□□□□□ -0.27
VTI1BP2-201ENST00000394154 CCDC129Q6ZRS4 1044 aa13.35□□□□□ -0.27
VTI1BP2-201ENST00000394154 WDR18Q9BV38 432 aa13.35□□□□□ -0.27
VTI1BP2-201ENST00000394154 MYO9BQ13459 2157 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms