RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 PKN1Q16512 942 aa25.66■■□□□ 1.7
HMGA2-203ENST00000393578 ANO1Q5XXA6 986 aa25.66■■□□□ 1.7
HMGA2-203ENST00000393578 NEDD1Q8NHV4 660 aa25.66■■□□□ 1.7
HMGA2-203ENST00000393578 FOXP1Q9H334 677 aaPredicted RBP25.66■■□□□ 1.7
HMGA2-203ENST00000393578 MYH6P13533 1939 aa25.66■■□□□ 1.7
HMGA2-203ENST00000393578 NOSTRINQ8IVI9 506 aa25.65■■□□□ 1.7
HMGA2-203ENST00000393578 RTKN2Q8IZC4 609 aa25.65■■□□□ 1.7
HMGA2-203ENST00000393578 V9GY48 417 aaPredicted RBP25.65■■□□□ 1.7
HMGA2-203ENST00000393578 ZNF646O15015 1829 aaPredicted RBP25.65■■□□□ 1.7
HMGA2-203ENST00000393578 CCDC93Q567U6 631 aa25.65■■□□□ 1.7
HMGA2-203ENST00000393578 KIAA0825Q8IV33 1275 aa25.65■■□□□ 1.7
HMGA2-203ENST00000393578 DIS3L2Q8IYB7 885 aaKnown RBP25.65■■□□□ 1.7
HMGA2-203ENST00000393578 SRBD1Q8N5C6 995 aaKnown RBP25.65■■□□□ 1.7
HMGA2-203ENST00000393578 DDX4Q9NQI0 724 aaKnown RBP25.65■■□□□ 1.7
HMGA2-203ENST00000393578 SPTLC2O15270 562 aa25.64■■□□□ 1.7
HMGA2-203ENST00000393578 NR1I2O75469 434 aa25.64■■□□□ 1.7
HMGA2-203ENST00000393578 SF3A1Q15459 793 aaKnown RBP25.64■■□□□ 1.7
HMGA2-203ENST00000393578 ADALQ6DHV7 355 aa25.64■■□□□ 1.7
HMGA2-203ENST00000393578 PCDHA7Q9UN72 937 aa25.64■■□□□ 1.7
HMGA2-203ENST00000393578 KCNJ14Q9UNX9 436 aa25.64■■□□□ 1.7
HMGA2-203ENST00000393578 ADAMTSL1Q8N6G6 1762 aa25.64■■□□□ 1.69
HMGA2-203ENST00000393578 CNTNAP5Q8WYK1 1306 aa25.64■■□□□ 1.69
HMGA2-203ENST00000393578 PPIP5K2O43314 1243 aa25.64■■□□□ 1.69
HMGA2-203ENST00000393578 KCNA3P22001 575 aa25.64■■□□□ 1.69
HMGA2-203ENST00000393578 GABPAQ06546 454 aa25.64■■□□□ 1.69
HMGA2-203ENST00000393578 CCAR1Q8IX12 1150 aaKnown RBP25.64■■□□□ 1.69
HMGA2-203ENST00000393578 KIF13BQ9NQT8 1826 aa25.63■■□□□ 1.69
HMGA2-203ENST00000393578 BTBD18B2RXH4 712 aa25.63■■□□□ 1.69
HMGA2-203ENST00000393578 DPEP1P16444 411 aa25.63■■□□□ 1.69
HMGA2-203ENST00000393578 PSMD1Q99460 953 aa25.63■■□□□ 1.69
HMGA2-203ENST00000393578 OSBPL5Q9H0X9 879 aaPredicted RBP25.63■■□□□ 1.69
HMGA2-203ENST00000393578 CLSTN2Q9H4D0 955 aa25.63■■□□□ 1.69
HMGA2-203ENST00000393578 A0A1W2PQ27 194 aa25.62■■□□□ 1.69
HMGA2-203ENST00000393578 A0A1W2PQ64 194 aa25.62■■□□□ 1.69
HMGA2-203ENST00000393578 A0A1W2PQD8 194 aa25.62■■□□□ 1.69
HMGA2-203ENST00000393578 SLC39A14Q15043 492 aa25.62■■□□□ 1.69
HMGA2-203ENST00000393578 MAP3K11Q16584 847 aa25.62■■□□□ 1.69
HMGA2-203ENST00000393578 TMEM47Q9BQJ4 181 aa25.62■■□□□ 1.69
HMGA2-203ENST00000393578 TNMDQ9H2S6 317 aa25.62■■□□□ 1.69
HMGA2-203ENST00000393578 SERPINA10Q9UK55 444 aa25.62■■□□□ 1.69
HMGA2-203ENST00000393578 STX8Q9UNK0 236 aa25.62■■□□□ 1.69
HMGA2-203ENST00000393578 GRM4Q14833 912 aa25.62■■□□□ 1.69
HMGA2-203ENST00000393578 FUCA2Q9BTY2 467 aa25.62■■□□□ 1.69
HMGA2-203ENST00000393578 GNAQP50148 359 aa25.61■■□□□ 1.69
HMGA2-203ENST00000393578 CCDC73Q6ZRK6 1079 aa25.61■■□□□ 1.69
HMGA2-203ENST00000393578 ANP32BQ92688 251 aaKnown RBP25.61■■□□□ 1.69
HMGA2-203ENST00000393578 SWAP70Q9UH65 585 aa25.61■■□□□ 1.69
HMGA2-203ENST00000393578 PHF20Q9BVI0 1012 aa25.6■■□□□ 1.69
HMGA2-203ENST00000393578 SERPINB13Q9UIV8 391 aa25.6■■□□□ 1.69
HMGA2-203ENST00000393578 PLIN4Q96Q06 1357 aa25.6■■□□□ 1.69
HMGA2-203ENST00000393578 NOVP48745 357 aa25.6■■□□□ 1.69
HMGA2-203ENST00000393578 FAM160A1Q05DH4 1040 aa25.6■■□□□ 1.69
HMGA2-203ENST00000393578 CAMK4Q16566 473 aa25.6■■□□□ 1.69
HMGA2-203ENST00000393578 RBM43Q6ZSC3 357 aaKnown RBP25.6■■□□□ 1.69
HMGA2-203ENST00000393578 VPS54Q9P1Q0 977 aa25.6■■□□□ 1.69
HMGA2-203ENST00000393578 MYO3BQ8WXR4 1341 aa25.59■■□□□ 1.69
HMGA2-203ENST00000393578 hCG_1642624A0A1W2PR95 340 aa25.59■■□□□ 1.69
HMGA2-203ENST00000393578 MRPS27Q92552 414 aaKnown RBP25.59■■□□□ 1.69
HMGA2-203ENST00000393578 GOLPH3LQ9H4A5 285 aa25.59■■□□□ 1.69
HMGA2-203ENST00000393578 YDJCA8MPS7 323 aa25.58■■□□□ 1.69
HMGA2-203ENST00000393578 PPP6R2O75170 966 aa25.58■■□□□ 1.69
HMGA2-203ENST00000393578 RBM5P52756 815 aaKnown RBP eCLIP25.58■■□□□ 1.69
HMGA2-203ENST00000393578 SNW1Q13573 536 aaKnown RBP25.58■■□□□ 1.69
HMGA2-203ENST00000393578 JMYQ8N9B5 988 aa25.58■■□□□ 1.69
HMGA2-203ENST00000393578 FSIP1Q8NA03 581 aa25.58■■□□□ 1.69
HMGA2-203ENST00000393578 ENGASEQ8NFI3 743 aa25.58■■□□□ 1.69
HMGA2-203ENST00000393578 SHISA4Q96DD7 197 aa25.58■■□□□ 1.69
HMGA2-203ENST00000393578 MAD2L2Q9UI95 211 aa25.58■■□□□ 1.69
HMGA2-203ENST00000393578 HLA-DOAP06340 250 aa25.58■■□□□ 1.69
HMGA2-203ENST00000393578 SCG2P13521 617 aa25.58■■□□□ 1.69
HMGA2-203ENST00000393578 NFIAQ12857 509 aa25.58■■□□□ 1.69
HMGA2-203ENST00000393578 PTPAQ15257 358 aa25.58■■□□□ 1.69
HMGA2-203ENST00000393578 PFKFB3Q16875 520 aaPredicted RBP25.58■■□□□ 1.69
HMGA2-203ENST00000393578 RILPL1Q5EBL4 403 aa25.58■■□□□ 1.69
HMGA2-203ENST00000393578 CEP95Q96GE4 821 aa25.58■■□□□ 1.69
HMGA2-203ENST00000393578 IDI2Q9BXS1 227 aa25.58■■□□□ 1.69
HMGA2-203ENST00000393578 NPM3O75607 178 aaKnown RBP25.57■■□□□ 1.68
HMGA2-203ENST00000393578 CCDC192P0DO97 292 aa25.57■■□□□ 1.68
HMGA2-203ENST00000393578 TOP1P11387 765 aaKnown RBP25.57■■□□□ 1.68
HMGA2-203ENST00000393578 EHD4Q9H223 541 aa25.57■■□□□ 1.68
HMGA2-203ENST00000393578 VPS33BQ9H267 617 aa25.57■■□□□ 1.68
HMGA2-203ENST00000393578 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.57■■□□□ 1.68
HMGA2-203ENST00000393578 KRT2P35908 639 aa25.56■■□□□ 1.68
HMGA2-203ENST00000393578 TGFB2P61812 414 aa25.56■■□□□ 1.68
HMGA2-203ENST00000393578 NR5A1Q13285 461 aa25.56■■□□□ 1.68
HMGA2-203ENST00000393578 SOGA3Q5TF21 947 aa25.56■■□□□ 1.68
HMGA2-203ENST00000393578 STAG2Q8N3U4 1231 aa25.56■■□□□ 1.68
HMGA2-203ENST00000393578 RNF214Q8ND24 703 aa25.56■■□□□ 1.68
HMGA2-203ENST00000393578 LZTS2Q9BRK4 669 aa25.56■■□□□ 1.68
HMGA2-203ENST00000393578 DHX36Q9H2U1 1008 aaKnown RBP25.56■■□□□ 1.68
HMGA2-203ENST00000393578 PALM3A6NDB9 673 aaPredicted RBP25.56■■□□□ 1.68
HMGA2-203ENST00000393578 AXDND1Q5T1B0 1012 aaPredicted RBP25.56■■□□□ 1.68
HMGA2-203ENST00000393578 OXER1Q8TDS5 423 aa25.56■■□□□ 1.68
HMGA2-203ENST00000393578 BRMS1Q9HCU9 246 aa25.56■■□□□ 1.68
HMGA2-203ENST00000393578 CTAGE5O15320 804 aa25.55■■□□□ 1.68
HMGA2-203ENST00000393578 PCDHAC2Q9Y5I4 1007 aa25.55■■□□□ 1.68
HMGA2-203ENST00000393578 PSME4Q14997 1843 aa25.55■■□□□ 1.68
HMGA2-203ENST00000393578 KINO60870 393 aaKnown RBP25.55■■□□□ 1.68
HMGA2-203ENST00000393578 ZBTB7AO95365 584 aa25.55■■□□□ 1.68
HMGA2-203ENST00000393578 TOB1P50616 345 aaPredicted RBP25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms