RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 FBXO18Q8NFZ0 1043 aa21.05■□□□□ 0.96
TRAF3-203ENST00000392745 C8orf76Q96K31 380 aa21.05■□□□□ 0.96
TRAF3-203ENST00000392745 AIFM3Q96NN9 605 aa21.05■□□□□ 0.96
TRAF3-203ENST00000392745 MTA3Q9BTC8 594 aa21.05■□□□□ 0.96
TRAF3-203ENST00000392745 DUOX1Q9NRD9 1551 aa21.05■□□□□ 0.96
TRAF3-203ENST00000392745 COL11A2P13942 1736 aaPredicted RBP21.04■□□□□ 0.96
TRAF3-203ENST00000392745 PSDA5PKW4 1024 aaPredicted RBP21.04■□□□□ 0.96
TRAF3-203ENST00000392745 EN1Q05925 392 aaPredicted RBP21.04■□□□□ 0.96
TRAF3-203ENST00000392745 SEC23AQ15436 765 aa21.04■□□□□ 0.96
TRAF3-203ENST00000392745 MKRN1Q9UHC7 482 aaKnown RBP21.04■□□□□ 0.96
TRAF3-203ENST00000392745 FHOD1Q9Y613 1164 aa21.04■□□□□ 0.96
TRAF3-203ENST00000392745 POLR3DP05423 398 aaPredicted RBP21.04■□□□□ 0.96
TRAF3-203ENST00000392745 PDE6BP35913 854 aa21.04■□□□□ 0.96
TRAF3-203ENST00000392745 BMS1Q14692 1282 aaKnown RBP21.04■□□□□ 0.96
TRAF3-203ENST00000392745 ZRSR1Q15695 479 aaKnown RBP21.04■□□□□ 0.96
TRAF3-203ENST00000392745 SH3RF3Q8TEJ3 882 aaPredicted RBP21.04■□□□□ 0.96
TRAF3-203ENST00000392745 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.04■□□□□ 0.963e-7■■■□□ 14.7
TRAF3-203ENST00000392745 GOLGB1Q14789 3259 aaKnown RBP21.04■□□□□ 0.96
TRAF3-203ENST00000392745 A0A1W2PQ27 194 aa21.03■□□□□ 0.96
TRAF3-203ENST00000392745 A0A1W2PQ64 194 aa21.03■□□□□ 0.96
TRAF3-203ENST00000392745 A0A1W2PQD8 194 aa21.03■□□□□ 0.96
TRAF3-203ENST00000392745 ERICH2A1L162 156 aa21.03■□□□□ 0.96
TRAF3-203ENST00000392745 RIMBP2O15034 1052 aa21.03■□□□□ 0.96
TRAF3-203ENST00000392745 RANBP6O60518 1105 aaKnown RBP21.03■□□□□ 0.96
TRAF3-203ENST00000392745 STK38Q15208 465 aa21.03■□□□□ 0.96
TRAF3-203ENST00000392745 BPIFA3Q9BQP9 254 aa21.03■□□□□ 0.96
TRAF3-203ENST00000392745 UBAC1Q9BSL1 405 aa21.03■□□□□ 0.96
TRAF3-203ENST00000392745 RGPD3A6NKT7 1758 aaPredicted RBP21.03■□□□□ 0.96
TRAF3-203ENST00000392745 RGPD4Q7Z3J3 1758 aa21.03■□□□□ 0.96
TRAF3-203ENST00000392745 USP17L8P0C7I0 530 aa21.03■□□□□ 0.96
TRAF3-203ENST00000392745 NCAPHQ15003 741 aa21.03■□□□□ 0.96
TRAF3-203ENST00000392745 SF3A1Q15459 793 aaKnown RBP21.03■□□□□ 0.96
TRAF3-203ENST00000392745 CAMKK2Q96RR4 588 aa21.03■□□□□ 0.96
TRAF3-203ENST00000392745 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.03■□□□□ 0.96
TRAF3-203ENST00000392745 TNKSO95271 1327 aa21.03■□□□□ 0.96
TRAF3-203ENST00000392745 CCDC66A2RUB6 948 aa21.02■□□□□ 0.96
TRAF3-203ENST00000392745 UBE2Q2LH0YL09 131 aa21.02■□□□□ 0.96
TRAF3-203ENST00000392745 GSTO1P78417 241 aa21.02■□□□□ 0.96
TRAF3-203ENST00000392745 SLC4A8Q2Y0W8 1093 aa21.02■□□□□ 0.96
TRAF3-203ENST00000392745 ARHGAP29Q52LW3 1261 aa21.02■□□□□ 0.96
TRAF3-203ENST00000392745 SBK1Q52WX2 424 aa21.02■□□□□ 0.96
TRAF3-203ENST00000392745 TMTC2Q8N394 836 aa21.02■□□□□ 0.96
TRAF3-203ENST00000392745 LAMB1P07942 1786 aa21.02■□□□□ 0.96
TRAF3-203ENST00000392745 ALDH1B1P30837 517 aa21.02■□□□□ 0.96
TRAF3-203ENST00000392745 PPP4CP60510 307 aa21.02■□□□□ 0.96
TRAF3-203ENST00000392745 MFSD14BQ5SR56 506 aa21.02■□□□□ 0.96
TRAF3-203ENST00000392745 ISM2Q6H9L7 571 aa21.02■□□□□ 0.96
TRAF3-203ENST00000392745 SYNE3Q6ZMZ3 975 aa21.02■□□□□ 0.96
TRAF3-203ENST00000392745 ENAHQ8N8S7 591 aaPredicted RBP21.02■□□□□ 0.96
TRAF3-203ENST00000392745 MASTLQ96GX5 879 aa21.02■□□□□ 0.96
TRAF3-203ENST00000392745 MCM9Q9NXL9 1143 aa21.02■□□□□ 0.96
TRAF3-203ENST00000392745 CDKL5O76039 1030 aa21.01■□□□□ 0.95
TRAF3-203ENST00000392745 SLC3A2P08195 630 aaKnown RBP21.01■□□□□ 0.95
TRAF3-203ENST00000392745 LMOD1P29536 600 aaPredicted RBP21.01■□□□□ 0.95
TRAF3-203ENST00000392745 SLC15A2Q16348 729 aa21.01■□□□□ 0.95
TRAF3-203ENST00000392745 HOMER1Q86YM7 354 aa21.01■□□□□ 0.95
TRAF3-203ENST00000392745 ZSCAN10Q96SZ4 725 aaPredicted RBP21.01■□□□□ 0.95
TRAF3-203ENST00000392745 RTFDC1Q9BY42 306 aaPredicted RBP21.01■□□□□ 0.95
TRAF3-203ENST00000392745 ARPP21Q9UBL0 812 aaPredicted RBP21.01■□□□□ 0.95
TRAF3-203ENST00000392745 MROH7-TTC4A0A0A0MT08 1334 aa21.01■□□□□ 0.95
TRAF3-203ENST00000392745 PCP11498 1178 aaKnown RBP21.01■□□□□ 0.95
TRAF3-203ENST00000392745 NOL10Q9BSC4 688 aaKnown RBP21.01■□□□□ 0.95
TRAF3-203ENST00000392745 NID2Q14112 1375 aa21■□□□□ 0.95
TRAF3-203ENST00000392745 ECM29Q5VYK3 1845 aa21■□□□□ 0.95
TRAF3-203ENST00000392745 ATP1A3P13637 1013 aa21■□□□□ 0.95
TRAF3-203ENST00000392745 IARSP41252 1262 aaKnown RBP21■□□□□ 0.95
TRAF3-203ENST00000392745 CPLX2Q6PUV4 134 aaKnown RBP21■□□□□ 0.95
TRAF3-203ENST00000392745 ZNF654Q8IZM8 581 aa21■□□□□ 0.95
TRAF3-203ENST00000392745 ALG1Q9BT22 464 aa21■□□□□ 0.95
TRAF3-203ENST00000392745 DNAI1Q9UI46 699 aa21■□□□□ 0.95
TRAF3-203ENST00000392745 ZNF202O95125 648 aa21■□□□□ 0.95
TRAF3-203ENST00000392745 BAG3O95817 575 aa21■□□□□ 0.95
TRAF3-203ENST00000392745 LDHCP07864 332 aa21■□□□□ 0.95
TRAF3-203ENST00000392745 PNMA6AP0CW24 399 aaPredicted RBP21■□□□□ 0.95
TRAF3-203ENST00000392745 USP5P45974 858 aa21■□□□□ 0.95
TRAF3-203ENST00000392745 NLRP12P59046 1061 aa21■□□□□ 0.95
TRAF3-203ENST00000392745 SPTLC2O15270 562 aa20.99■□□□□ 0.95
TRAF3-203ENST00000392745 FANCGO15287 622 aa20.99■□□□□ 0.95
TRAF3-203ENST00000392745 ORC4O43929 436 aa20.99■□□□□ 0.95
TRAF3-203ENST00000392745 PLA2G4AP47712 749 aa20.99■□□□□ 0.95
TRAF3-203ENST00000392745 KCNJ6P48051 423 aa20.99■□□□□ 0.95
TRAF3-203ENST00000392745 GTF2IP78347 998 aa20.99■□□□□ 0.95
TRAF3-203ENST00000392745 FANCCQ00597 558 aa20.99■□□□□ 0.95
TRAF3-203ENST00000392745 TGFBRAP1Q8WUH2 860 aa20.99■□□□□ 0.95
TRAF3-203ENST00000392745 NUP133Q8WUM0 1156 aa20.99■□□□□ 0.95
TRAF3-203ENST00000392745 ZNF622Q969S3 477 aaKnown RBP eCLIP20.99■□□□□ 0.95
TRAF3-203ENST00000392745 TMEM51Q9NW97 253 aa20.99■□□□□ 0.95
TRAF3-203ENST00000392745 CDK5RAP2Q96SN8 1893 aa20.99■□□□□ 0.95
TRAF3-203ENST00000392745 KIF28PB7ZC32 967 aa20.99■□□□□ 0.95
TRAF3-203ENST00000392745 ETF1P62495 437 aaKnown RBP20.99■□□□□ 0.95
TRAF3-203ENST00000392745 RTN1Q16799 776 aa20.99■□□□□ 0.95
TRAF3-203ENST00000392745 FAM47AQ5JRC9 791 aa20.99■□□□□ 0.95
TRAF3-203ENST00000392745 C12orf60Q5U649 245 aa20.99■□□□□ 0.95
TRAF3-203ENST00000392745 CMTR1Q8N1G2 835 aaKnown RBP20.99■□□□□ 0.95
TRAF3-203ENST00000392745 FANCBQ8NB91 859 aa20.99■□□□□ 0.95
TRAF3-203ENST00000392745 FAM205AQ6ZU69 1335 aa20.98■□□□□ 0.95
TRAF3-203ENST00000392745 NMT2O60551 498 aa20.98■□□□□ 0.95
TRAF3-203ENST00000392745 IFNAR1P17181 557 aa20.98■□□□□ 0.95
TRAF3-203ENST00000392745 KCNG4Q8TDN1 519 aa20.98■□□□□ 0.95
TRAF3-203ENST00000392745 SLC26A6Q9BXS9 759 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms