RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 NCAPHQ15003 741 aa12.36□□□□□ -0.43
BRF1-204ENST00000392557 AXDND1Q5T1B0 1012 aaPredicted RBP12.36□□□□□ -0.43
BRF1-204ENST00000392557 SHC4Q6S5L8 630 aa12.36□□□□□ -0.43
BRF1-204ENST00000392557 SMARCE1Q969G3 411 aa12.36□□□□□ -0.43
BRF1-204ENST00000392557 KRT23Q9C075 422 aa12.36□□□□□ -0.43
BRF1-204ENST00000392557 LY9Q9HBG7 655 aa12.36□□□□□ -0.43
BRF1-204ENST00000392557 TRIM37O94972 964 aa12.35□□□□□ -0.43
BRF1-204ENST00000392557 GNAT2P19087 354 aa12.35□□□□□ -0.43
BRF1-204ENST00000392557 NFIXQ14938 502 aa12.35□□□□□ -0.43
BRF1-204ENST00000392557 TRIM22Q8IYM9 498 aa12.35□□□□□ -0.43
BRF1-204ENST00000392557 TMEM87BQ96K49 555 aa12.35□□□□□ -0.43
BRF1-204ENST00000392557 ARFGAP3Q9NP61 516 aa12.35□□□□□ -0.43
BRF1-204ENST00000392557 ZMYM6O95789 1325 aa12.35□□□□□ -0.43
BRF1-204ENST00000392557 BTBD18B2RXH4 712 aa12.35□□□□□ -0.43
BRF1-204ENST00000392557 DZIP1Q86YF9 867 aaKnown RBP12.35□□□□□ -0.43
BRF1-204ENST00000392557 IGDCC4Q8TDY8 1250 aa12.35□□□□□ -0.43
BRF1-204ENST00000392557 ZNF804BA4D1E1 1349 aa12.35□□□□□ -0.43
BRF1-204ENST00000392557 ARHGAP6O43182 974 aa12.35□□□□□ -0.43
BRF1-204ENST00000392557 EVX2Q03828 476 aa12.35□□□□□ -0.43
BRF1-204ENST00000392557 KRI1Q8N9T8 703 aaKnown RBP12.35□□□□□ -0.43
BRF1-204ENST00000392557 CNNM2Q9H8M5 875 aa12.35□□□□□ -0.43
BRF1-204ENST00000392557 QTRT2Q9H974 415 aaKnown RBP12.35□□□□□ -0.43
BRF1-204ENST00000392557 LRRC4BQ9NT99 713 aa12.35□□□□□ -0.43
BRF1-204ENST00000392557 IKBKBO14920 756 aa12.34□□□□□ -0.43
BRF1-204ENST00000392557 COBLO75128 1261 aa12.34□□□□□ -0.43
BRF1-204ENST00000392557 LMAN1P49257 510 aa12.34□□□□□ -0.43
BRF1-204ENST00000392557 KIF4BQ2VIQ3 1234 aa12.34□□□□□ -0.43
BRF1-204ENST00000392557 RPGRQ92834 1020 aaKnown RBP12.34□□□□□ -0.43
BRF1-204ENST00000392557 WDR24Q96S15 920 aa12.34□□□□□ -0.43
BRF1-204ENST00000392557 L2HGDHQ9H9P8 463 aa12.34□□□□□ -0.43
BRF1-204ENST00000392557 USP17L12C9JPN9 530 aa12.34□□□□□ -0.43
BRF1-204ENST00000392557 USP17L21D6R901 530 aa12.34□□□□□ -0.43
BRF1-204ENST00000392557 OAS2P29728 719 aaKnown RBP12.34□□□□□ -0.43
BRF1-204ENST00000392557 MECOMQ03112 1051 aa12.34□□□□□ -0.43
BRF1-204ENST00000392557 RC3H1Q5TC82 1133 aaKnown RBP12.34□□□□□ -0.43
BRF1-204ENST00000392557 KRBA2Q6ZNG9 492 aa12.34□□□□□ -0.43
BRF1-204ENST00000392557 TOGARAM2Q6ZUX3 1019 aa12.34□□□□□ -0.43
BRF1-204ENST00000392557 DHX58Q96C10 678 aa12.34□□□□□ -0.43
BRF1-204ENST00000392557 IRX2Q9BZI1 471 aaPredicted RBP12.34□□□□□ -0.43
BRF1-204ENST00000392557 RNF216Q9NWF9 866 aaPredicted RBP12.34□□□□□ -0.43
BRF1-204ENST00000392557 RTN1Q16799 776 aa12.34□□□□□ -0.43
BRF1-204ENST00000392557 VSTM4Q8IW00 320 aa12.34□□□□□ -0.43
BRF1-204ENST00000392557 BPIFA3Q9BQP9 254 aa12.34□□□□□ -0.43
BRF1-204ENST00000392557 SRRTQ9BXP5 876 aaKnown RBP12.34□□□□□ -0.43
BRF1-204ENST00000392557 SERTAD1Q9UHV2 236 aa12.34□□□□□ -0.43
BRF1-204ENST00000392557 FHOD1Q9Y613 1164 aa12.34□□□□□ -0.43
BRF1-204ENST00000392557 RTL9Q8NET4 1388 aa12.34□□□□□ -0.43
BRF1-204ENST00000392557 TPM1P09493 284 aa12.33□□□□□ -0.44
BRF1-204ENST00000392557 DIS3L2Q8IYB7 885 aaKnown RBP12.33□□□□□ -0.44
BRF1-204ENST00000392557 STAMQ92783 540 aa12.33□□□□□ -0.44
BRF1-204ENST00000392557 RNF41Q9H4P4 317 aaPredicted RBP12.33□□□□□ -0.44
BRF1-204ENST00000392557 ATRNO75882 1429 aa12.33□□□□□ -0.44
BRF1-204ENST00000392557 H2AFXP16104 143 aaPredicted RBP12.33□□□□□ -0.44
BRF1-204ENST00000392557 PDE4BQ07343 736 aa12.33□□□□□ -0.44
BRF1-204ENST00000392557 ALX1Q15699 326 aa12.33□□□□□ -0.44
BRF1-204ENST00000392557 ANKRD2Q9GZV1 360 aa12.33□□□□□ -0.44
BRF1-204ENST00000392557 SAMSN1Q9NSI8 373 aaKnown RBP12.33□□□□□ -0.44
BRF1-204ENST00000392557 DDX60Q8IY21 1712 aaKnown RBP12.33□□□□□ -0.44
BRF1-204ENST00000392557 SPATA31A6Q5VVP1 1343 aa12.33□□□□□ -0.44
BRF1-204ENST00000392557 EFCAB8A8MWE9 144 aa12.33□□□□□ -0.44
BRF1-204ENST00000392557 SMC1AQ14683 1233 aaKnown RBP12.33□□□□□ -0.44
BRF1-204ENST00000392557 POSTNQ15063 836 aa12.33□□□□□ -0.44
BRF1-204ENST00000392557 FAM47AQ5JRC9 791 aa12.33□□□□□ -0.44
BRF1-204ENST00000392557 SPECC1LQ69YQ0 1117 aa12.33□□□□□ -0.44
BRF1-204ENST00000392557 METTL16Q86W50 562 aaKnown RBP12.33□□□□□ -0.44
BRF1-204ENST00000392557 ESR2Q92731 530 aa12.33□□□□□ -0.44
BRF1-204ENST00000392557 DACH1Q9UI36 760 aa12.33□□□□□ -0.44
BRF1-204ENST00000392557 TNKSO95271 1327 aa12.32□□□□□ -0.44
BRF1-204ENST00000392557 PHLPP2Q6ZVD8 1323 aa12.32□□□□□ -0.44
BRF1-204ENST00000392557 PHACTR2O75167 634 aa12.32□□□□□ -0.44
BRF1-204ENST00000392557 TUBB4AP04350 444 aa12.32□□□□□ -0.44
BRF1-204ENST00000392557 GUCY1A2P33402 732 aa12.32□□□□□ -0.44
BRF1-204ENST00000392557 HNRNPH2P55795 449 aaKnown RBP12.32□□□□□ -0.44
BRF1-204ENST00000392557 SLC10A5Q5PT55 438 aa12.32□□□□□ -0.44
BRF1-204ENST00000392557 RASSF8Q8NHQ8 419 aa12.32□□□□□ -0.44
BRF1-204ENST00000392557 TRPC5Q9UL62 973 aaPredicted RBP12.32□□□□□ -0.44
BRF1-204ENST00000392557 COL1A1P02452 1464 aaPredicted RBP12.32□□□□□ -0.44
BRF1-204ENST00000392557 CUTAO60888 179 aa12.32□□□□□ -0.44
BRF1-204ENST00000392557 RHOXF2BP0C7M4 288 aa12.32□□□□□ -0.44
BRF1-204ENST00000392557 CYP2D6P10635 497 aa12.32□□□□□ -0.44
BRF1-204ENST00000392557 PLA2G4AP47712 749 aa12.32□□□□□ -0.44
BRF1-204ENST00000392557 MTF1Q14872 753 aa12.32□□□□□ -0.44
BRF1-204ENST00000392557 RHOXF2Q9BQY4 288 aa12.32□□□□□ -0.44
BRF1-204ENST00000392557 CABP5Q9NP86 173 aa12.32□□□□□ -0.44
BRF1-204ENST00000392557 PNPLA7Q6ZV29 1317 aa12.32□□□□□ -0.44
BRF1-204ENST00000392557 KIF5CO60282 957 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 NR5A1Q13285 461 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 DIXDC1Q155Q3 683 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 GOLGA1Q92805 767 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 CASP1P29466 404 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 GRIN1Q05586 938 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 ZNF569Q5MCW4 686 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 ZNF654Q8IZM8 581 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 ZNF384Q8TF68 577 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 STAG1Q8WVM7 1258 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 CCDC102AQ96A19 550 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.31□□□□□ -0.44
BRF1-204ENST00000392557 MCM9Q9NXL9 1143 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 NMT2O60551 498 aa12.31□□□□□ -0.44
BRF1-204ENST00000392557 TADA3O75528 432 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms