RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 PPP6R2O75170 966 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 MYZAPP0CAP1 466 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 GUCY2FP51841 1108 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 UBE4AQ14139 1066 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 NCAPH2Q6IBW4 605 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 PI16Q6UXB8 463 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 RSRC1Q96IZ7 334 aaKnown RBP15.97■□□□□ 0.15
RTF1-201ENST00000389629 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.97■□□□□ 0.15
RTF1-201ENST00000389629 GSTTP1A0A1W2PQM5 241 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 TADA3O75528 432 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 TRIM14Q14142 442 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 ANKS4BQ8N8V4 417 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 SPAG5Q96R06 1193 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 WDR24Q96S15 920 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 STX8Q9UNK0 236 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 HGSO14964 777 aaPredicted RBP15.97■□□□□ 0.15
RTF1-201ENST00000389629 GNAT2P19087 354 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 PLCD1P51178 756 aa15.97■□□□□ 0.15
RTF1-201ENST00000389629 DZIP1Q86YF9 867 aaKnown RBP15.97■□□□□ 0.15
RTF1-201ENST00000389629 SMYD4Q8IYR2 804 aaPredicted RBP15.97■□□□□ 0.15
RTF1-201ENST00000389629 FRMD3A2A2Y4 597 aa15.96■□□□□ 0.15
RTF1-201ENST00000389629 TTC38Q5R3I4 469 aa15.96■□□□□ 0.15
RTF1-201ENST00000389629 APOA5Q6Q788 366 aa15.96■□□□□ 0.15
RTF1-201ENST00000389629 HEATR3Q7Z4Q2 680 aa15.96■□□□□ 0.15
RTF1-201ENST00000389629 ALDH8A1Q9H2A2 487 aaPredicted RBP15.96■□□□□ 0.15
RTF1-201ENST00000389629 TCEAL9Q9UHQ7 104 aa15.96■□□□□ 0.15
RTF1-201ENST00000389629 MAGEB6P1A0A0J9YX57 407 aa15.96■□□□□ 0.15
RTF1-201ENST00000389629 NEBLO76041 1014 aa15.96■□□□□ 0.15
RTF1-201ENST00000389629 PDE4BQ07343 736 aa15.96■□□□□ 0.15
RTF1-201ENST00000389629 NOC4LQ9BVI4 516 aaKnown RBP15.96■□□□□ 0.15
RTF1-201ENST00000389629 MAN1B1Q9UKM7 699 aa15.96■□□□□ 0.15
RTF1-201ENST00000389629 GIGYF2Q6Y7W6 1299 aaKnown RBP15.96■□□□□ 0.15
RTF1-201ENST00000389629 NELFBQ8WX92 580 aa15.96■□□□□ 0.15
RTF1-201ENST00000389629 JPH2Q9BR39 696 aaPredicted RBP15.96■□□□□ 0.15
RTF1-201ENST00000389629 KAT6BQ8WYB5 2073 aa15.96■□□□□ 0.15
RTF1-201ENST00000389629 ZRSR2Q15696 482 aaKnown RBP15.96■□□□□ 0.15
RTF1-201ENST00000389629 IRX2Q9BZI1 471 aaPredicted RBP15.96■□□□□ 0.15
RTF1-201ENST00000389629 BAIAP2L1Q9UHR4 511 aa15.96■□□□□ 0.15
RTF1-201ENST00000389629 A2ML1A8K2U0 1454 aa15.96■□□□□ 0.14
RTF1-201ENST00000389629 CEP85LQ5SZL2 805 aa15.95■□□□□ 0.14
RTF1-201ENST00000389629 SPATA1Q5VX52 437 aa15.95■□□□□ 0.14
RTF1-201ENST00000389629 DTHD1Q6ZMT9 781 aa15.95■□□□□ 0.14
RTF1-201ENST00000389629 PUS7LQ9H0K6 701 aaKnown RBP15.95■□□□□ 0.14
RTF1-201ENST00000389629 ZPR1O75312 459 aa15.95■□□□□ 0.14
RTF1-201ENST00000389629 TMEM266Q2M3C6 531 aa15.95■□□□□ 0.14
RTF1-201ENST00000389629 TSGA10IPQ3SY00 556 aa15.95■□□□□ 0.14
RTF1-201ENST00000389629 KLHL7Q8IXQ5 586 aa15.95■□□□□ 0.14
RTF1-201ENST00000389629 OR8K1Q8NGG5 319 aa15.95■□□□□ 0.14
RTF1-201ENST00000389629 LOC102724159A0A0B4J2E5 919 aa15.95■□□□□ 0.14
RTF1-201ENST00000389629 PWP2Q15269 919 aaKnown RBP15.95■□□□□ 0.14
RTF1-201ENST00000389629 SRLQ86TD4 932 aa15.95■□□□□ 0.14
RTF1-201ENST00000389629 CSGALNACT2Q8N6G5 542 aa15.95■□□□□ 0.14
RTF1-201ENST00000389629 EPN1Q9Y6I3 576 aaPredicted RBP15.95■□□□□ 0.14
RTF1-201ENST00000389629 CD163L1Q9NR16 1453 aa15.95■□□□□ 0.14
RTF1-201ENST00000389629 PHKG2P15735 406 aa15.95■□□□□ 0.14
RTF1-201ENST00000389629 NYAP1Q6ZVC0 841 aa15.95■□□□□ 0.14
RTF1-201ENST00000389629 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.95■□□□□ 0.14
RTF1-201ENST00000389629 CCDC172P0C7W6 258 aa15.94■□□□□ 0.14
RTF1-201ENST00000389629 DPF2Q92785 391 aa15.94■□□□□ 0.14
RTF1-201ENST00000389629 PPFIA4O75335 1185 aa15.94■□□□□ 0.14
RTF1-201ENST00000389629 KIAA0753Q2KHM9 967 aa15.94■□□□□ 0.14
RTF1-201ENST00000389629 AKNAD1Q5T1N1 836 aa15.94■□□□□ 0.14
RTF1-201ENST00000389629 TRIML1Q8N9V2 468 aa15.94■□□□□ 0.14
RTF1-201ENST00000389629 MRPS25P82663 173 aaKnown RBP15.94■□□□□ 0.14
RTF1-201ENST00000389629 IFT20Q8IY31 132 aa15.94■□□□□ 0.14
RTF1-201ENST00000389629 RAB34Q9BZG1 259 aa15.94■□□□□ 0.14
RTF1-201ENST00000389629 PLA2G4AP47712 749 aa15.94■□□□□ 0.14
RTF1-201ENST00000389629 CCDC51Q96ER9 411 aa15.94■□□□□ 0.14
RTF1-201ENST00000389629 CSRNP2Q9H175 543 aa15.94■□□□□ 0.14
RTF1-201ENST00000389629 SELENOOQ9BVL4 669 aa15.93■□□□□ 0.14
RTF1-201ENST00000389629 CALM1P0DP23 149 aa15.93■□□□□ 0.14
RTF1-201ENST00000389629 CALM2P0DP24 149 aa15.93■□□□□ 0.14
RTF1-201ENST00000389629 CALM3P0DP25 149 aa15.93■□□□□ 0.14
RTF1-201ENST00000389629 SSR1P43307 286 aaKnown RBP15.93■□□□□ 0.14
RTF1-201ENST00000389629 ST3GAL1Q11201 340 aa15.93■□□□□ 0.14
RTF1-201ENST00000389629 BUB1BO60566 1050 aaPredicted RBP15.93■□□□□ 0.14
RTF1-201ENST00000389629 VIMP08670 466 aaKnown RBP15.93■□□□□ 0.14
RTF1-201ENST00000389629 MAGEA1P43355 309 aa15.93■□□□□ 0.14
RTF1-201ENST00000389629 TNNC1P63316 161 aa15.93■□□□□ 0.14
RTF1-201ENST00000389629 CTNNBL1Q8WYA6 563 aaPredicted RBP15.93■□□□□ 0.14
RTF1-201ENST00000389629 TSGA10Q9BZW7 698 aa15.93■□□□□ 0.14
RTF1-201ENST00000389629 TRIM31Q9BZY9 425 aa15.93■□□□□ 0.14
RTF1-201ENST00000389629 PDE6AP16499 860 aa15.93■□□□□ 0.14
RTF1-201ENST00000389629 TYW1BQ6NUM6 668 aa15.93■□□□□ 0.14
RTF1-201ENST00000389629 TADA2BQ86TJ2 420 aa15.93■□□□□ 0.14
RTF1-201ENST00000389629 ZNF654Q8IZM8 581 aa15.93■□□□□ 0.14
RTF1-201ENST00000389629 PAIP2Q9BPZ3 127 aaKnown RBP15.93■□□□□ 0.14
RTF1-201ENST00000389629 BPIFA3Q9BQP9 254 aa15.93■□□□□ 0.14
RTF1-201ENST00000389629 USP32Q8NFA0 1604 aa15.93■□□□□ 0.14
RTF1-201ENST00000389629 KCNJ18B7U540 433 aa15.92■□□□□ 0.14
RTF1-201ENST00000389629 CALML3P27482 149 aa15.92■□□□□ 0.14
RTF1-201ENST00000389629 NR5A1Q13285 461 aa15.92■□□□□ 0.14
RTF1-201ENST00000389629 KCNJ12Q14500 433 aa15.92■□□□□ 0.14
RTF1-201ENST00000389629 ANKRD13CQ8N6S4 541 aa15.92■□□□□ 0.14
RTF1-201ENST00000389629 CRNKL1Q9BZJ0 848 aaKnown RBP15.92■□□□□ 0.14
RTF1-201ENST00000389629 BICDL2A1A5D9 508 aa15.92■□□□□ 0.14
RTF1-201ENST00000389629 IFT88Q13099 833 aa15.92■□□□□ 0.14
RTF1-201ENST00000389629 IFNL3Q8IZI9 196 aa15.92■□□□□ 0.14
RTF1-201ENST00000389629 CCDC155Q8N6L0 562 aa15.92■□□□□ 0.14
RTF1-201ENST00000389629 ENOX1Q8TC92 643 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms