RNA–Protein interactions for RNA: ENST00000389231.9

USP5-202, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP5, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-202ENST00000389231 ITPK1Q13572 414 aa13.68□□□□□ -0.22
USP5-202ENST00000389231 DHX58Q96C10 678 aa13.68□□□□□ -0.22
USP5-202ENST00000389231 PHF20Q9BVI0 1012 aa13.68□□□□□ -0.22
USP5-202ENST00000389231 AATFQ9NY61 560 aaKnown RBP eCLIP13.68□□□□□ -0.22
USP5-202ENST00000389231 ZNF804BA4D1E1 1349 aa13.68□□□□□ -0.22
USP5-202ENST00000389231 VWA3AA6NCI4 1184 aa13.68□□□□□ -0.22
USP5-202ENST00000389231 SEC31AO94979 1220 aaKnown RBP13.68□□□□□ -0.22
USP5-202ENST00000389231 ZRANB2O95218 330 aaKnown RBP eCLIP13.68□□□□□ -0.22
USP5-202ENST00000389231 DYNLL1P63167 89 aaKnown RBP13.68□□□□□ -0.22
USP5-202ENST00000389231 PRPF3O43395 683 aaKnown RBP13.67□□□□□ -0.22
USP5-202ENST00000389231 STX10O60499 249 aa13.67□□□□□ -0.22
USP5-202ENST00000389231 TADA3O75528 432 aa13.67□□□□□ -0.22
USP5-202ENST00000389231 ERCC5P28715 1186 aaPredicted RBP13.67□□□□□ -0.22
USP5-202ENST00000389231 CYP2C19P33261 490 aa13.67□□□□□ -0.22
USP5-202ENST00000389231 PLCD1P51178 756 aa13.67□□□□□ -0.22
USP5-202ENST00000389231 NR1I3Q14994 352 aa13.67□□□□□ -0.22
USP5-202ENST00000389231 CDC5LQ99459 802 aaKnown RBP13.67□□□□□ -0.22
USP5-202ENST00000389231 GNL3LQ9NVN8 582 aaKnown RBP13.67□□□□□ -0.22
USP5-202ENST00000389231 EFCAB8A8MWE9 144 aa13.67□□□□□ -0.22
USP5-202ENST00000389231 PLEKHA8P1O95397 391 aa13.67□□□□□ -0.22
USP5-202ENST00000389231 KRT2P35908 639 aa13.67□□□□□ -0.22
USP5-202ENST00000389231 IFIT1BQ5T764 474 aaKnown RBP13.67□□□□□ -0.22
USP5-202ENST00000389231 CATIPQ7Z7H3 387 aa13.67□□□□□ -0.22
USP5-202ENST00000389231 EPC1Q9H2F5 836 aa13.67□□□□□ -0.22
USP5-202ENST00000389231 WNT7AO00755 349 aa13.67□□□□□ -0.22
USP5-202ENST00000389231 AFMP43652 599 aa13.67□□□□□ -0.22
USP5-202ENST00000389231 TEX35Q5T0J7 233 aa13.67□□□□□ -0.22
USP5-202ENST00000389231 PARP3Q9Y6F1 533 aa13.67□□□□□ -0.22
USP5-202ENST00000389231 TPM1P09493 284 aa13.66□□□□□ -0.22
USP5-202ENST00000389231 TROAPQ12815 778 aa13.66□□□□□ -0.22
USP5-202ENST00000389231 ARAP2Q8WZ64 1704 aa13.66□□□□□ -0.22
USP5-202ENST00000389231 CASP1P29466 404 aa13.66□□□□□ -0.22
USP5-202ENST00000389231 CASQ1P31415 396 aa13.66□□□□□ -0.22
USP5-202ENST00000389231 GNG11P61952 73 aa13.66□□□□□ -0.22
USP5-202ENST00000389231 TOGARAM2Q6ZUX3 1019 aa13.66□□□□□ -0.22
USP5-202ENST00000389231 C3orf67Q6ZVT6 689 aa13.66□□□□□ -0.22
USP5-202ENST00000389231 SH3RF1Q7Z6J0 888 aa13.66□□□□□ -0.22
USP5-202ENST00000389231 ZNF384Q8TF68 577 aa13.66□□□□□ -0.22
USP5-202ENST00000389231 SYMPKQ92797 1274 aaKnown RBP13.66□□□□□ -0.22
USP5-202ENST00000389231 PAGE5Q96GU1 130 aa13.66□□□□□ -0.22
USP5-202ENST00000389231 BRIP1Q9BX63 1249 aa13.66□□□□□ -0.22
USP5-202ENST00000389231 A0A1B0GTH6 734 aa13.65□□□□□ -0.22
USP5-202ENST00000389231 UBE4AQ14139 1066 aa13.65□□□□□ -0.22
USP5-202ENST00000389231 ZNF174Q15697 407 aa13.65□□□□□ -0.22
USP5-202ENST00000389231 NOM1Q5C9Z4 860 aaKnown RBP13.65□□□□□ -0.22
USP5-202ENST00000389231 IQCA1Q86XH1 822 aa13.65□□□□□ -0.22
USP5-202ENST00000389231 ANKRD18AQ8IVF6 992 aa13.65□□□□□ -0.22
USP5-202ENST00000389231 ECM29Q5VYK3 1845 aa13.65□□□□□ -0.22
USP5-202ENST00000389231 DOCK2Q92608 1830 aa13.65□□□□□ -0.22
USP5-202ENST00000389231 BCL9LQ86UU0 1499 aa13.65□□□□□ -0.22
USP5-202ENST00000389231 FGRP09769 529 aa13.65□□□□□ -0.22
USP5-202ENST00000389231 CD44P16070 742 aaKnown RBP13.65□□□□□ -0.22
USP5-202ENST00000389231 KLHL10Q6JEL2 608 aa13.65□□□□□ -0.22
USP5-202ENST00000389231 APTXQ7Z2E3 356 aaKnown RBP13.65□□□□□ -0.22
USP5-202ENST00000389231 CCDC34Q96HJ3 373 aa13.65□□□□□ -0.22
USP5-202ENST00000389231 WDR24Q96S15 920 aa13.65□□□□□ -0.22
USP5-202ENST00000389231 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.65□□□□□ -0.22
USP5-202ENST00000389231 TEX33O43247 280 aa13.65□□□□□ -0.23
USP5-202ENST00000389231 STX17P56962 302 aa13.65□□□□□ -0.23
USP5-202ENST00000389231 NPY5RQ15761 445 aa13.65□□□□□ -0.23
USP5-202ENST00000389231 DDB1Q16531 1140 aa13.65□□□□□ -0.23
USP5-202ENST00000389231 CAVIN4Q5BKX8 364 aa13.65□□□□□ -0.23
USP5-202ENST00000389231 SPATA1Q5VX52 437 aa13.65□□□□□ -0.23
USP5-202ENST00000389231 CTR9Q6PD62 1173 aa13.65□□□□□ -0.23
USP5-202ENST00000389231 FERMT2Q96AC1 680 aa13.65□□□□□ -0.23
USP5-202ENST00000389231 FAM84BQ96KN1 310 aaPredicted RBP13.65□□□□□ -0.23
USP5-202ENST00000389231 RBM28Q9NW13 759 aaKnown RBP13.65□□□□□ -0.23
USP5-202ENST00000389231 GOLGA6L9A6NEM1 432 aa13.64□□□□□ -0.23
USP5-202ENST00000389231 USP17L12C9JPN9 530 aa13.64□□□□□ -0.23
USP5-202ENST00000389231 USP17L21D6R901 530 aa13.64□□□□□ -0.23
USP5-202ENST00000389231 HNRNPH2P55795 449 aaKnown RBP13.64□□□□□ -0.23
USP5-202ENST00000389231 CUL4BQ13620 913 aa13.64□□□□□ -0.23
USP5-202ENST00000389231 ERFEQ4G0M1 354 aa13.64□□□□□ -0.23
USP5-202ENST00000389231 CT47A1Q5JQC4 288 aaPredicted RBP13.64□□□□□ -0.23
USP5-202ENST00000389231 TNFRSF25Q93038 417 aa13.64□□□□□ -0.23
USP5-202ENST00000389231 BSDC1Q9NW68 430 aaPredicted RBP13.64□□□□□ -0.23
USP5-202ENST00000389231 MINPP1Q9UNW1 487 aa13.64□□□□□ -0.23
USP5-202ENST00000389231 BMP15O95972 392 aa13.64□□□□□ -0.23
USP5-202ENST00000389231 BBXQ8WY36 941 aaPredicted RBP13.64□□□□□ -0.23
USP5-202ENST00000389231 TMEM51Q9NW97 253 aa13.64□□□□□ -0.23
USP5-202ENST00000389231 COL1A1P02452 1464 aaPredicted RBP13.63□□□□□ -0.23
USP5-202ENST00000389231 CALM1P0DP23 149 aa13.63□□□□□ -0.23
USP5-202ENST00000389231 CALM2P0DP24 149 aa13.63□□□□□ -0.23
USP5-202ENST00000389231 CALM3P0DP25 149 aa13.63□□□□□ -0.23
USP5-202ENST00000389231 IRX5P78411 483 aaPredicted RBP13.63□□□□□ -0.23
USP5-202ENST00000389231 EVX2Q03828 476 aa13.63□□□□□ -0.23
USP5-202ENST00000389231 DPYDQ12882 1025 aa13.63□□□□□ -0.23
USP5-202ENST00000389231 TMTC3Q6ZXV5 915 aa13.63□□□□□ -0.23
USP5-202ENST00000389231 MARCH10Q8NA82 808 aaPredicted RBP13.63□□□□□ -0.23
USP5-202ENST00000389231 BRMS1Q9HCU9 246 aa13.63□□□□□ -0.23
USP5-202ENST00000389231 PTGDRQ13258 359 aa13.63□□□□□ -0.23
USP5-202ENST00000389231 SF3B3Q15393 1217 aaKnown RBP13.63□□□□□ -0.23
USP5-202ENST00000389231 SMYD4Q8IYR2 804 aaPredicted RBP13.63□□□□□ -0.23
USP5-202ENST00000389231 SRBD1Q8N5C6 995 aaKnown RBP13.63□□□□□ -0.23
USP5-202ENST00000389231 TRERF1Q96PN7 1200 aa13.63□□□□□ -0.23
USP5-202ENST00000389231 GSDMAQ96QA5 445 aa13.63□□□□□ -0.23
USP5-202ENST00000389231 DESI2Q9BSY9 194 aa13.63□□□□□ -0.23
USP5-202ENST00000389231 ZNF652Q9Y2D9 606 aa13.63□□□□□ -0.23
USP5-202ENST00000389231 PPP1R3GB7ZBB8 358 aa13.62□□□□□ -0.23
USP5-202ENST00000389231 AKR1B15C9JRZ8 316 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms