RNA–Protein interactions for RNA: ENST00000383331.4

HCG27-201, Transcript of HLA complex group 27, humanhuman

TSL 1 (best) BASIC

Gene HCG27, Length 1,720 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-201ENST00000383331 KIAA0825Q8IV33 1275 aa17.3■□□□□ 0.36
HCG27-201ENST00000383331 CRACR2BQ8N4Y2 399 aaPredicted RBP17.3■□□□□ 0.36
HCG27-201ENST00000383331 SMC1BQ8NDV3 1235 aa17.3■□□□□ 0.36
HCG27-201ENST00000383331 WASF1Q92558 559 aa17.3■□□□□ 0.36
HCG27-201ENST00000383331 FTOQ9C0B1 505 aaKnown RBP eCLIP17.3■□□□□ 0.36
HCG27-201ENST00000383331 RTEL1Q9NZ71 1219 aa17.3■□□□□ 0.36
HCG27-201ENST00000383331 ZNRF3Q9ULT6 936 aa17.3■□□□□ 0.36
HCG27-201ENST00000383331 KIF28PB7ZC32 967 aa17.29■□□□□ 0.36
HCG27-201ENST00000383331 NPM3O75607 178 aaKnown RBP17.29■□□□□ 0.36
HCG27-201ENST00000383331 NASPP49321 788 aaPredicted RBP17.29■□□□□ 0.36
HCG27-201ENST00000383331 TROAPQ12815 778 aa17.29■□□□□ 0.36
HCG27-201ENST00000383331 CCDC178Q5BJE1 867 aa17.29■□□□□ 0.36
HCG27-201ENST00000383331 CATIPQ7Z7H3 387 aa17.29■□□□□ 0.36
HCG27-201ENST00000383331 TRIM22Q8IYM9 498 aa17.29■□□□□ 0.36
HCG27-201ENST00000383331 NUP133Q8WUM0 1156 aa17.29■□□□□ 0.36
HCG27-201ENST00000383331 TSPY26PQ9H489 355 aa17.29■□□□□ 0.36
HCG27-201ENST00000383331 USP40Q9NVE5 1235 aa17.29■□□□□ 0.36
HCG27-201ENST00000383331 TAOK2Q9UL54 1235 aa17.29■□□□□ 0.36
HCG27-201ENST00000383331 MYH6P13533 1939 aa17.29■□□□□ 0.36
HCG27-201ENST00000383331 DICER1Q9UPY3 1922 aaKnown RBP17.29■□□□□ 0.36
HCG27-201ENST00000383331 ADAMTSL1Q8N6G6 1762 aa17.28■□□□□ 0.36
HCG27-201ENST00000383331 WDHD1O75717 1129 aaPredicted RBP17.28■□□□□ 0.36
HCG27-201ENST00000383331 DDAH1O94760 285 aa17.28■□□□□ 0.36
HCG27-201ENST00000383331 CALM1P0DP23 149 aa17.28■□□□□ 0.36
HCG27-201ENST00000383331 CALM2P0DP24 149 aa17.28■□□□□ 0.36
HCG27-201ENST00000383331 CALM3P0DP25 149 aa17.28■□□□□ 0.36
HCG27-201ENST00000383331 MMP14P50281 582 aa17.28■□□□□ 0.36
HCG27-201ENST00000383331 HTRA3P83110 453 aa17.28■□□□□ 0.36
HCG27-201ENST00000383331 MYSM1Q5VVJ2 828 aa17.28■□□□□ 0.36
HCG27-201ENST00000383331 CDC42EP5Q6NZY7 148 aa17.28■□□□□ 0.36
HCG27-201ENST00000383331 COL4A5P29400 1685 aa17.28■□□□□ 0.36
HCG27-201ENST00000383331 POTECB2RU33 542 aa17.27■□□□□ 0.36
HCG27-201ENST00000383331 CEBPZQ03701 1054 aaKnown RBP17.27■□□□□ 0.36
HCG27-201ENST00000383331 FAM47AQ5JRC9 791 aa17.27■□□□□ 0.36
HCG27-201ENST00000383331 C16orf86Q6ZW13 317 aa17.27■□□□□ 0.36
HCG27-201ENST00000383331 POLR3EQ9NVU0 708 aa17.27■□□□□ 0.36
HCG27-201ENST00000383331 TSPY2A6NKD2 308 aa17.27■□□□□ 0.35
HCG27-201ENST00000383331 UBE2Q2LH0YL09 131 aa17.27■□□□□ 0.35
HCG27-201ENST00000383331 DDNO94850 711 aaPredicted RBP17.27■□□□□ 0.35
HCG27-201ENST00000383331 DEXIO95424 95 aa17.27■□□□□ 0.35
HCG27-201ENST00000383331 U2AF2P26368 475 aaKnown RBP eCLIP17.27■□□□□ 0.35
HCG27-201ENST00000383331 GUCY1A2P33402 732 aa17.27■□□□□ 0.35
HCG27-201ENST00000383331 FUT2Q10981 343 aa17.27■□□□□ 0.35
HCG27-201ENST00000383331 TRIM29Q14134 588 aa17.27■□□□□ 0.35
HCG27-201ENST00000383331 RCSD1Q6JBY9 416 aa17.27■□□□□ 0.35
HCG27-201ENST00000383331 AGBL3Q8NEM8 1001 aa17.27■□□□□ 0.35
HCG27-201ENST00000383331 JDP2Q8WYK2 163 aa17.27■□□□□ 0.35
HCG27-201ENST00000383331 ANKS1AQ92625 1134 aa17.27■□□□□ 0.35
HCG27-201ENST00000383331 DYNLL2Q96FJ2 89 aa17.27■□□□□ 0.35
HCG27-201ENST00000383331 GMLQ99445 158 aa17.27■□□□□ 0.35
HCG27-201ENST00000383331 FUCA2Q9BTY2 467 aa17.27■□□□□ 0.35
HCG27-201ENST00000383331 IDI2Q9BXS1 227 aa17.27■□□□□ 0.35
HCG27-201ENST00000383331 RNF26Q9BY78 433 aaPredicted RBP17.27■□□□□ 0.35
HCG27-201ENST00000383331 MKNK2Q9HBH9 465 aa17.27■□□□□ 0.35
HCG27-201ENST00000383331 DDX19AQ9NUU7 478 aaKnown RBP17.27■□□□□ 0.35
HCG27-201ENST00000383331 RBM28Q9NW13 759 aaKnown RBP17.27■□□□□ 0.35
HCG27-201ENST00000383331 HDAC9Q9UKV0 1011 aa17.27■□□□□ 0.35
HCG27-201ENST00000383331 PSMD14O00487 310 aa17.26■□□□□ 0.35
HCG27-201ENST00000383331 NMT2O60551 498 aa17.26■□□□□ 0.35
HCG27-201ENST00000383331 YEATS4O95619 227 aa17.26■□□□□ 0.35
HCG27-201ENST00000383331 PLCD1P51178 756 aa17.26■□□□□ 0.35
HCG27-201ENST00000383331 DNAJC5GQ8N7S2 189 aa17.26■□□□□ 0.35
HCG27-201ENST00000383331 TCP11L1Q9NUJ3 509 aa17.26■□□□□ 0.35
HCG27-201ENST00000383331 SAP30BPQ9UHR5 308 aaKnown RBP17.26■□□□□ 0.35
HCG27-201ENST00000383331 WDR90Q96KV7 1748 aa17.26■□□□□ 0.35
HCG27-201ENST00000383331 TFAP4Q01664 338 aa17.25■□□□□ 0.35
HCG27-201ENST00000383331 DGKHQ86XP1 1220 aa17.25■□□□□ 0.35
HCG27-201ENST00000383331 ZNF444Q8N0Y2 327 aaPredicted RBP17.25■□□□□ 0.35
HCG27-201ENST00000383331 LINC00301Q8NCQ3 95 aa17.25■□□□□ 0.35
HCG27-201ENST00000383331 BICD2Q8TD16 824 aa17.25■□□□□ 0.35
HCG27-201ENST00000383331 OSBPL5Q9H0X9 879 aaPredicted RBP17.25■□□□□ 0.35
HCG27-201ENST00000383331 DACT1Q9NYF0 836 aa17.25■□□□□ 0.35
HCG27-201ENST00000383331 RBM5P52756 815 aaKnown RBP eCLIP17.24■□□□□ 0.35
HCG27-201ENST00000383331 SLC4A8Q2Y0W8 1093 aa17.24■□□□□ 0.35
HCG27-201ENST00000383331 CMTR1Q8N1G2 835 aaKnown RBP17.24■□□□□ 0.35
HCG27-201ENST00000383331 OGFOD1Q8N543 542 aa17.24■□□□□ 0.35
HCG27-201ENST00000383331 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.24■□□□□ 0.35
HCG27-201ENST00000383331 NUP62CLQ9H1M0 184 aa17.24■□□□□ 0.35
HCG27-201ENST00000383331 DHX36Q9H2U1 1008 aaKnown RBP17.24■□□□□ 0.35
HCG27-201ENST00000383331 IL17RBQ9NRM6 502 aa17.24■□□□□ 0.35
HCG27-201ENST00000383331 CLIC4Q9Y696 253 aa17.24■□□□□ 0.35
HCG27-201ENST00000383331 MYH8P13535 1937 aa17.24■□□□□ 0.35
HCG27-201ENST00000383331 PRPF3O43395 683 aaKnown RBP17.24■□□□□ 0.35
HCG27-201ENST00000383331 RAD17O75943 681 aa17.24■□□□□ 0.35
HCG27-201ENST00000383331 MMP1P03956 469 aa17.24■□□□□ 0.35
HCG27-201ENST00000383331 CDK8P49336 464 aa17.24■□□□□ 0.35
HCG27-201ENST00000383331 CFAP100Q494V2 611 aa17.24■□□□□ 0.35
HCG27-201ENST00000383331 RBM43Q6ZSC3 357 aaKnown RBP17.24■□□□□ 0.35
HCG27-201ENST00000383331 TMTC3Q6ZXV5 915 aa17.24■□□□□ 0.35
HCG27-201ENST00000383331 KCNG4Q8TDN1 519 aa17.24■□□□□ 0.35
HCG27-201ENST00000383331 CLSTN2Q9H4D0 955 aa17.24■□□□□ 0.35
HCG27-201ENST00000383331 DDX4Q9NQI0 724 aaKnown RBP17.24■□□□□ 0.35
HCG27-201ENST00000383331 SWAP70Q9UH65 585 aa17.24■□□□□ 0.35
HCG27-201ENST00000383331 COL2A1P02458 1487 aaPredicted RBP17.23■□□□□ 0.35
HCG27-201ENST00000383331 NR1I2O75469 434 aa17.23■□□□□ 0.35
HCG27-201ENST00000383331 HLA-DOAP06340 250 aa17.23■□□□□ 0.35
HCG27-201ENST00000383331 RASA1P20936 1047 aa17.23■□□□□ 0.35
HCG27-201ENST00000383331 GABPAQ06546 454 aa17.23■□□□□ 0.35
HCG27-201ENST00000383331 PICALMQ13492 652 aa17.23■□□□□ 0.35
HCG27-201ENST00000383331 TNIP1Q15025 636 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms