RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 KAT14Q9H8E8 782 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 GJB4Q9NTQ9 266 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 PI4KBQ9UBF8 816 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 MYH15Q9Y2K3 1946 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 CDKL5O76039 1030 aa9.32□□□□□ -0.92
ERCC8-202ENST00000381118 SHMT1P34896 483 aa9.32□□□□□ -0.92
ERCC8-202ENST00000381118 TROAPQ12815 778 aa9.32□□□□□ -0.92
ERCC8-202ENST00000381118 NTRK3Q16288 839 aa9.32□□□□□ -0.92
ERCC8-202ENST00000381118 SPDYE2Q495Y8 402 aa9.32□□□□□ -0.92
ERCC8-202ENST00000381118 TBC1D10BQ4KMP7 808 aaPredicted RBP9.32□□□□□ -0.92
ERCC8-202ENST00000381118 OTUD7BQ6GQQ9 843 aa9.32□□□□□ -0.92
ERCC8-202ENST00000381118 RASGRP2Q7LDG7 609 aa9.32□□□□□ -0.92
ERCC8-202ENST00000381118 PNMA1Q8ND90 353 aa9.32□□□□□ -0.92
ERCC8-202ENST00000381118 SWAP70Q9UH65 585 aa9.32□□□□□ -0.92
ERCC8-202ENST00000381118 CNOT7Q9UIV1 285 aaKnown RBP9.32□□□□□ -0.92
ERCC8-202ENST00000381118 KIF3AQ9Y496 699 aa9.32□□□□□ -0.92
ERCC8-202ENST00000381118 ENTPD3O75355 529 aa9.32□□□□□ -0.92
ERCC8-202ENST00000381118 PLEKHA8P1O95397 391 aa9.32□□□□□ -0.92
ERCC8-202ENST00000381118 SHROOM1Q2M3G4 852 aaPredicted RBP9.32□□□□□ -0.92
ERCC8-202ENST00000381118 FAM173BQ6P4H8 233 aa9.32□□□□□ -0.92
ERCC8-202ENST00000381118 DGKHQ86XP1 1220 aa9.32□□□□□ -0.92
ERCC8-202ENST00000381118 CDAN1Q8IWY9 1227 aa9.32□□□□□ -0.92
ERCC8-202ENST00000381118 NEDD1Q8NHV4 660 aa9.32□□□□□ -0.92
ERCC8-202ENST00000381118 GDPD2Q9HCC8 539 aa9.32□□□□□ -0.92
ERCC8-202ENST00000381118 CCDC196A0A1B0GTZ2 297 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 hCG_1642624A0A1W2PR95 340 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 DDX11L8A8MPP1 907 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 DDAH1O94760 285 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 NCLP19338 710 aaKnown RBP9.31□□□□□ -0.92
ERCC8-202ENST00000381118 RPS12P25398 132 aaKnown RBP9.31□□□□□ -0.92
ERCC8-202ENST00000381118 SSRP1Q08945 709 aaKnown RBP9.31□□□□□ -0.92
ERCC8-202ENST00000381118 TPRNQ4KMQ1 711 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 CTCFLQ8NI51 663 aaPredicted RBP9.31□□□□□ -0.92
ERCC8-202ENST00000381118 C8orf76Q96K31 380 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 TMEM47Q9BQJ4 181 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 TMEM39BQ9GZU3 492 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 EHD4Q9H223 541 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 TCP11L1Q9NUJ3 509 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 RNF181Q9P0P0 153 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 NID2Q14112 1375 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 POLR2AP24928 1970 aaKnown RBP9.31□□□□□ -0.92
ERCC8-202ENST00000381118 GREB1LQ9C091 1923 aaPredicted RBP9.31□□□□□ -0.92
ERCC8-202ENST00000381118 GOLGA6L22H0YM25 854 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 GDF11O95390 407 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 CALM1P0DP23 149 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 CALM2P0DP24 149 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 CALM3P0DP25 149 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 IFNAR1P17181 557 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 GUCY1A2P33402 732 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 ATP2B2Q01814 1243 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 CERKLQ49MI3 558 aaPredicted RBP9.31□□□□□ -0.92
ERCC8-202ENST00000381118 LRRC47Q8N1G4 583 aaKnown RBP9.31□□□□□ -0.92
ERCC8-202ENST00000381118 MTMR14Q8NCE2 650 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 PIBF1Q8WXW3 757 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 ALG1Q9BT22 464 aa9.31□□□□□ -0.92
ERCC8-202ENST00000381118 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.31□□□□□ -0.92
ERCC8-202ENST00000381118 CNTNAP1P78357 1384 aa9.3□□□□□ -0.92
ERCC8-202ENST00000381118 ASTN2O75129 1339 aaPredicted RBP9.3□□□□□ -0.92
ERCC8-202ENST00000381118 NT5C2P49902 561 aa9.3□□□□□ -0.92
ERCC8-202ENST00000381118 RCAN1P53805 252 aa9.3□□□□□ -0.92
ERCC8-202ENST00000381118 DNM1Q05193 864 aaKnown RBP9.3□□□□□ -0.92
ERCC8-202ENST00000381118 CCDC178Q5BJE1 867 aa9.3□□□□□ -0.92
ERCC8-202ENST00000381118 CLEC17AQ6ZS10 378 aa9.3□□□□□ -0.92
ERCC8-202ENST00000381118 TRIM22Q8IYM9 498 aa9.3□□□□□ -0.92
ERCC8-202ENST00000381118 FAM151AQ8WW52 585 aa9.3□□□□□ -0.92
ERCC8-202ENST00000381118 CNPY2Q9Y2B0 182 aa9.3□□□□□ -0.92
ERCC8-202ENST00000381118 ATP6V1DQ9Y5K8 247 aa9.3□□□□□ -0.92
ERCC8-202ENST00000381118 ATRNL1Q5VV63 1379 aa9.3□□□□□ -0.92
ERCC8-202ENST00000381118 FIBPO43427 364 aa9.29□□□□□ -0.92
ERCC8-202ENST00000381118 RAD21O60216 631 aa9.29□□□□□ -0.92
ERCC8-202ENST00000381118 PRPF40AO75400 957 aaKnown RBP9.29□□□□□ -0.92
ERCC8-202ENST00000381118 FMNL1O95466 1100 aaPredicted RBP9.29□□□□□ -0.92
ERCC8-202ENST00000381118 GOLGA8HP0CJ92 632 aa9.29□□□□□ -0.92
ERCC8-202ENST00000381118 ZNF280AP59817 542 aaPredicted RBP9.29□□□□□ -0.92
ERCC8-202ENST00000381118 KIF4BQ2VIQ3 1234 aa9.29□□□□□ -0.92
ERCC8-202ENST00000381118 MIGA2Q7L4E1 593 aa9.29□□□□□ -0.92
ERCC8-202ENST00000381118 NBPF11Q86T75 865 aa9.29□□□□□ -0.92
ERCC8-202ENST00000381118 FOXP4Q8IVH2 680 aaPredicted RBP9.29□□□□□ -0.92
ERCC8-202ENST00000381118 STAG2Q8N3U4 1231 aa9.29□□□□□ -0.92
ERCC8-202ENST00000381118 DPF2Q92785 391 aa9.29□□□□□ -0.92
ERCC8-202ENST00000381118 ZBED3Q96IU2 234 aaPredicted RBP9.29□□□□□ -0.92
ERCC8-202ENST00000381118 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.29□□□□□ -0.92
ERCC8-202ENST00000381118 RBM28Q9NW13 759 aaKnown RBP9.29□□□□□ -0.92
ERCC8-202ENST00000381118 MTMR4Q9NYA4 1195 aa9.29□□□□□ -0.92
ERCC8-202ENST00000381118 CLIP2Q9UDT6 1046 aa9.29□□□□□ -0.92
ERCC8-202ENST00000381118 DDNO94850 711 aaPredicted RBP9.29□□□□□ -0.92
ERCC8-202ENST00000381118 PDIA4P13667 645 aaKnown RBP9.29□□□□□ -0.92
ERCC8-202ENST00000381118 AKAP17AQ02040 695 aaKnown RBP9.29□□□□□ -0.92
ERCC8-202ENST00000381118 GPR162Q16538 588 aa9.29□□□□□ -0.92
ERCC8-202ENST00000381118 SRBD1Q8N5C6 995 aaKnown RBP9.29□□□□□ -0.92
ERCC8-202ENST00000381118 ANKS1AQ92625 1134 aa9.29□□□□□ -0.92
ERCC8-202ENST00000381118 HACL1Q9UJ83 578 aa9.29□□□□□ -0.92
ERCC8-202ENST00000381118 PLIN4Q96Q06 1357 aa9.29□□□□□ -0.92
ERCC8-202ENST00000381118 H7C1D1 291 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 DEXIO95424 95 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 TTLL1O95922 423 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 PPP2R5BQ15173 497 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 TATDN1Q6P1N9 297 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 USP17L2Q6R6M4 530 aa9.28□□□□□ -0.92
ERCC8-202ENST00000381118 TMTC3Q6ZXV5 915 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms