RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 RHBDL3P58872 404 aa7.4□□□□□ -1.23
RIPK1-202ENST00000380409 GNG11P61952 73 aa7.4□□□□□ -1.23
RIPK1-202ENST00000380409 POLA2Q14181 598 aa7.4□□□□□ -1.23
RIPK1-202ENST00000380409 ZRSR2Q15696 482 aaKnown RBP7.4□□□□□ -1.23
RIPK1-202ENST00000380409 MPRIPQ6WCQ1 1025 aa7.4□□□□□ -1.23
RIPK1-202ENST00000380409 UNC5CLQ8IV45 518 aa7.4□□□□□ -1.23
RIPK1-202ENST00000380409 NOA1Q8NC60 698 aaKnown RBP7.4□□□□□ -1.23
RIPK1-202ENST00000380409 TRIM58Q8NG06 486 aa7.4□□□□□ -1.23
RIPK1-202ENST00000380409 AENQ8WTP8 325 aaKnown RBP7.4□□□□□ -1.23
RIPK1-202ENST00000380409 SMARCC1Q92922 1105 aaPredicted RBP7.4□□□□□ -1.23
RIPK1-202ENST00000380409 OSBPL7Q9BZF2 842 aa7.4□□□□□ -1.23
RIPK1-202ENST00000380409 ZSWIM6Q9HCJ5 1215 aa7.4□□□□□ -1.23
RIPK1-202ENST00000380409 A0A1B0GVG6 124 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 B4DLN1 442 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 PPP1R12BO60237 982 aaPredicted RBP7.39□□□□□ -1.23
RIPK1-202ENST00000380409 STX10O60499 249 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 ATP6V1G2O95670 118 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 TAF7Q15545 349 aaPredicted RBP7.39□□□□□ -1.23
RIPK1-202ENST00000380409 TTMPQ5BVD1 217 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 ANKRD20A8PQ5CZ79 823 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 SFMBT2Q5VUG0 894 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 UBE3BQ7Z3V4 1068 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 TRIM42Q8IWZ5 723 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 CEP57L1Q8IYX8 460 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 TC2NQ8N9U0 490 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 RSRC1Q96IZ7 334 aaKnown RBP7.39□□□□□ -1.23
RIPK1-202ENST00000380409 ZSCAN31Q96LW9 406 aaPredicted RBP7.39□□□□□ -1.23
RIPK1-202ENST00000380409 MMADHCQ9H3L0 296 aaPredicted RBP7.39□□□□□ -1.23
RIPK1-202ENST00000380409 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.39□□□□□ -1.23
RIPK1-202ENST00000380409 MAP2P11137 1827 aaKnown RBP7.39□□□□□ -1.23
RIPK1-202ENST00000380409 A0A087WWV3 80 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 CPLX1O14810 134 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 ZNF24P17028 368 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 GNGT1P63211 74 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 KRT28Q7Z3Y7 464 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 ARHGEF25Q86VW2 580 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 CCDC83Q8IWF9 413 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 NAT10Q9H0A0 1025 aaKnown RBP7.39□□□□□ -1.23
RIPK1-202ENST00000380409 DNAAF2Q9NVR5 837 aaKnown RBP7.39□□□□□ -1.23
RIPK1-202ENST00000380409 SPG7Q9UQ90 795 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 TMEM221A6NGB7 291 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 ABLIM1O14639 778 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 TPP2P29144 1249 aaPredicted RBP7.39□□□□□ -1.23
RIPK1-202ENST00000380409 GNAQP50148 359 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 USP14P54578 494 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 WHAMMP3Q1A5X7 153 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 ACBD5Q5T8D3 534 aaPredicted RBP7.39□□□□□ -1.23
RIPK1-202ENST00000380409 APLFQ8IW19 511 aaPredicted RBP7.39□□□□□ -1.23
RIPK1-202ENST00000380409 CNTROBQ8N137 903 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 NSMCE1Q8WV22 266 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 DPF2Q92785 391 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 BICD1Q96G01 975 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 SPAG5Q96R06 1193 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 EPN3Q9H201 632 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 RMI1Q9H9A7 625 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 GOPCQ9HD26 462 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 PAPOLBQ9NRJ5 636 aaKnown RBP7.39□□□□□ -1.23
RIPK1-202ENST00000380409 DIP2AQ14689 1571 aa7.39□□□□□ -1.23
RIPK1-202ENST00000380409 OPLAHO14841 1288 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 DPCR1Q3MIW9 517 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 CMPK2Q5EBM0 449 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 KDM7AQ6ZMT4 941 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 AACSQ86V21 672 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 ZNF473Q8WTR7 871 aaKnown RBP7.38□□□□□ -1.23
RIPK1-202ENST00000380409 DLC1Q96QB1 1528 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 C5orf60A6NFR6 353 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 NPTXRO95502 500 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 ATP4AP20648 1035 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 FMR1NBQ8N0W7 255 aaPredicted RBP7.38□□□□□ -1.23
RIPK1-202ENST00000380409 TCEANC2Q96MN5 208 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 CCDC8Q9H0W5 538 aaPredicted RBP7.38□□□□□ -1.23
RIPK1-202ENST00000380409 WDR35Q9P2L0 1181 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 MAPK8IP1Q9UQF2 711 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 PLEKHG1Q9ULL1 1385 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 UBN2Q6ZU65 1347 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 GOLGA8KD6RF30 607 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 WASLO00401 505 aaPredicted RBP7.38□□□□□ -1.23
RIPK1-202ENST00000380409 PTCD1O75127 700 aaKnown RBP7.38□□□□□ -1.23
RIPK1-202ENST00000380409 PEX14O75381 377 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 TFRCP02786 760 aaKnown RBP7.38□□□□□ -1.23
RIPK1-202ENST00000380409 EIF4BP23588 611 aaKnown RBP7.38□□□□□ -1.23
RIPK1-202ENST00000380409 PIP4K2AP48426 406 aaPredicted RBP7.38□□□□□ -1.23
RIPK1-202ENST00000380409 RC3H1Q5TC82 1133 aaKnown RBP7.38□□□□□ -1.23
RIPK1-202ENST00000380409 STAMBPL1Q96FJ0 436 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 JAKMIP1Q96N16 626 aaKnown RBP7.38□□□□□ -1.23
RIPK1-202ENST00000380409 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.38□□□□□ -1.23
RIPK1-202ENST00000380409 RCOR1Q9UKL0 485 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 LRRC37A3O60309 1634 aa7.38□□□□□ -1.23
RIPK1-202ENST00000380409 TPD52L2O43399 206 aaKnown RBP7.37□□□□□ -1.23
RIPK1-202ENST00000380409 MYO1BO43795 1136 aa7.37□□□□□ -1.23
RIPK1-202ENST00000380409 CCT4P50991 539 aaKnown RBP7.37□□□□□ -1.23
RIPK1-202ENST00000380409 ELF3P78545 371 aaPredicted RBP7.37□□□□□ -1.23
RIPK1-202ENST00000380409 FANCCQ00597 558 aa7.37□□□□□ -1.23
RIPK1-202ENST00000380409 TMEM62Q0P6H9 643 aa7.37□□□□□ -1.23
RIPK1-202ENST00000380409 PKN1Q16512 942 aa7.37□□□□□ -1.23
RIPK1-202ENST00000380409 C1orf131Q8NDD1 294 aaKnown RBP7.37□□□□□ -1.23
RIPK1-202ENST00000380409 CUL5Q93034 780 aa7.37□□□□□ -1.23
RIPK1-202ENST00000380409 MTA3Q9BTC8 594 aa7.37□□□□□ -1.23
RIPK1-202ENST00000380409 BOLA2Q9H3K6 86 aa7.37□□□□□ -1.23
RIPK1-202ENST00000380409 TRPV5Q9NQA5 729 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms