RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 CACNB2Q08289 660 aaPredicted RBP28.1■■■□□ 2.09
U2AF1-202ENST00000380276 USP17L24Q0WX57 530 aa28.1■■■□□ 2.09
U2AF1-202ENST00000380276 CCL14Q16627 93 aa28.1■■■□□ 2.09
U2AF1-202ENST00000380276 ABCB5Q2M3G0 1257 aa28.1■■■□□ 2.09
U2AF1-202ENST00000380276 CEP85Q6P2H3 762 aa28.1■■■□□ 2.09
U2AF1-202ENST00000380276 ERC1Q8IUD2 1116 aa28.1■■■□□ 2.09
U2AF1-202ENST00000380276 LRCH3Q96II8 777 aa28.1■■■□□ 2.09
U2AF1-202ENST00000380276 SOX1O00570 391 aaPredicted RBP28.09■■■□□ 2.09
U2AF1-202ENST00000380276 USP14P54578 494 aa28.09■■■□□ 2.09
U2AF1-202ENST00000380276 MAP3K21Q5TCX8 1036 aa28.09■■■□□ 2.09
U2AF1-202ENST00000380276 TATDN1Q6P1N9 297 aa28.09■■■□□ 2.09
U2AF1-202ENST00000380276 APBA2Q99767 749 aa28.09■■■□□ 2.09
U2AF1-202ENST00000380276 POLR3DP05423 398 aaPredicted RBP28.08■■■□□ 2.09
U2AF1-202ENST00000380276 CCND3P30281 292 aaPredicted RBP28.08■■■□□ 2.09
U2AF1-202ENST00000380276 CCNA1P78396 465 aa28.08■■■□□ 2.09
U2AF1-202ENST00000380276 EHD4Q9H223 541 aa28.08■■■□□ 2.09
U2AF1-202ENST00000380276 IL1RAPL2Q9NP60 686 aa28.08■■■□□ 2.09
U2AF1-202ENST00000380276 GLRX3O76003 335 aaKnown RBP28.07■■■□□ 2.08
U2AF1-202ENST00000380276 MNX1P50219 401 aaPredicted RBP28.07■■■□□ 2.08
U2AF1-202ENST00000380276 C12orf42Q96LP6 360 aa28.07■■■□□ 2.08
U2AF1-202ENST00000380276 RABGAP1Q9Y3P9 1069 aa28.07■■■□□ 2.08
U2AF1-202ENST00000380276 MAGEB6P1A0A0J9YX57 407 aa28.06■■■□□ 2.08
U2AF1-202ENST00000380276 APBB1O00213 710 aa28.06■■■□□ 2.08
U2AF1-202ENST00000380276 MORN1Q5T089 497 aa28.06■■■□□ 2.08
U2AF1-202ENST00000380276 ACER1Q8TDN7 264 aa28.06■■■□□ 2.08
U2AF1-202ENST00000380276 MPHOSPH10O00566 681 aaKnown RBP28.05■■■□□ 2.08
U2AF1-202ENST00000380276 VCAM1P19320 739 aa28.05■■■□□ 2.08
U2AF1-202ENST00000380276 PLCD1P51178 756 aa28.05■■■□□ 2.08
U2AF1-202ENST00000380276 MAP2K5Q13163 448 aa28.05■■■□□ 2.08
U2AF1-202ENST00000380276 POTEEQ6S8J3 1075 aa28.05■■■□□ 2.08
U2AF1-202ENST00000380276 PANK1Q8TE04 598 aa28.05■■■□□ 2.08
U2AF1-202ENST00000380276 USP6NLQ92738 828 aa28.05■■■□□ 2.08
U2AF1-202ENST00000380276 GDF15Q99988 308 aa28.05■■■□□ 2.08
U2AF1-202ENST00000380276 KIAA1683Q9H0B3 1180 aa28.05■■■□□ 2.08
U2AF1-202ENST00000380276 NAV1Q8NEY1 1877 aa28.04■■■□□ 2.08
U2AF1-202ENST00000380276 SZT2Q5T011 3432 aa28.04■■■□□ 2.08
U2AF1-202ENST00000380276 PFASO15067 1338 aa28.04■■■□□ 2.08
U2AF1-202ENST00000380276 CNMDO75829 334 aa28.04■■■□□ 2.08
U2AF1-202ENST00000380276 TTF1Q15361 905 aaPredicted RBP28.04■■■□□ 2.08
U2AF1-202ENST00000380276 CATSPERGQ6ZRH7 1159 aa28.04■■■□□ 2.08
U2AF1-202ENST00000380276 EDC3Q96F86 508 aaKnown RBP28.04■■■□□ 2.08
U2AF1-202ENST00000380276 IVNS1ABPQ9Y6Y0 642 aa28.04■■■□□ 2.08
U2AF1-202ENST00000380276 HSP90AB4PQ58FF6 505 aa28.03■■■□□ 2.08
U2AF1-202ENST00000380276 MFSD14CQ5VZR4 134 aa28.03■■■□□ 2.08
U2AF1-202ENST00000380276 DNAJC2Q99543 621 aaKnown RBP28.03■■■□□ 2.08
U2AF1-202ENST00000380276 CRNKL1Q9BZJ0 848 aaKnown RBP28.03■■■□□ 2.08
U2AF1-202ENST00000380276 RPAP3Q9H6T3 665 aaPredicted RBP28.03■■■□□ 2.08
U2AF1-202ENST00000380276 BMP8BP34820 402 aa28.02■■■□□ 2.08
U2AF1-202ENST00000380276 SHMT1P34896 483 aa28.02■■■□□ 2.08
U2AF1-202ENST00000380276 MAGEA10P43363 369 aaPredicted RBP28.02■■■□□ 2.08
U2AF1-202ENST00000380276 SLC9C2Q5TAH2 1124 aa28.02■■■□□ 2.08
U2AF1-202ENST00000380276 TMED8Q6PL24 325 aaPredicted RBP28.02■■■□□ 2.08
U2AF1-202ENST00000380276 RIOK1Q9BRS2 568 aaKnown RBP28.02■■■□□ 2.08
U2AF1-202ENST00000380276 MCM9Q9NXL9 1143 aa28.02■■■□□ 2.08
U2AF1-202ENST00000380276 RANBP2P49792 3224 aaKnown RBP28.02■■■□□ 2.08
U2AF1-202ENST00000380276 CNGA1P29973 690 aa28.01■■■□□ 2.07
U2AF1-202ENST00000380276 SEPT2Q15019 361 aa28.01■■■□□ 2.07
U2AF1-202ENST00000380276 RHPN1Q8TCX5 695 aa28.01■■■□□ 2.07
U2AF1-202ENST00000380276 PDE6AP16499 860 aa28■■■□□ 2.07
U2AF1-202ENST00000380276 PTPREP23469 700 aa28■■■□□ 2.07
U2AF1-202ENST00000380276 ATP2B2Q01814 1243 aa28■■■□□ 2.07
U2AF1-202ENST00000380276 CLASRPQ8N2M8 674 aaKnown RBP28■■■□□ 2.07
U2AF1-202ENST00000380276 UBE2OQ9C0C9 1292 aaKnown RBP28■■■□□ 2.07
U2AF1-202ENST00000380276 BTBD7Q9P203 1132 aa28■■■□□ 2.07
U2AF1-202ENST00000380276 SLC15A5A6NIM6 579 aa27.99■■■□□ 2.07
U2AF1-202ENST00000380276 GOLIM4O00461 696 aa27.99■■■□□ 2.07
U2AF1-202ENST00000380276 LHX8Q68G74 356 aa27.99■■■□□ 2.07
U2AF1-202ENST00000380276 FLRT1Q9NZU1 646 aa27.99■■■□□ 2.07
U2AF1-202ENST00000380276 ZNF532Q9HCE3 1301 aa27.98■■■□□ 2.07
U2AF1-202ENST00000380276 SPDYE16A6NNV3 312 aaPredicted RBP27.98■■■□□ 2.07
U2AF1-202ENST00000380276 IFIT2P09913 472 aaKnown RBP27.98■■■□□ 2.07
U2AF1-202ENST00000380276 GUCY1A2P33402 732 aa27.98■■■□□ 2.07
U2AF1-202ENST00000380276 SLC17A8Q8NDX2 589 aa27.98■■■□□ 2.07
U2AF1-202ENST00000380276 SDR42E1Q8WUS8 393 aa27.98■■■□□ 2.07
U2AF1-202ENST00000380276 TANGO6Q9C0B7 1094 aa27.98■■■□□ 2.07
U2AF1-202ENST00000380276 EVX2Q03828 476 aa27.97■■■□□ 2.07
U2AF1-202ENST00000380276 LRRC26Q2I0M4 334 aa27.97■■■□□ 2.07
U2AF1-202ENST00000380276 COL6A1P12109 1028 aa27.96■■■□□ 2.07
U2AF1-202ENST00000380276 TDHQ8IZJ6 230 aa27.96■■■□□ 2.07
U2AF1-202ENST00000380276 MIER1Q8N108 512 aa27.96■■■□□ 2.07
U2AF1-202ENST00000380276 KIF1BPQ96EK5 621 aa27.96■■■□□ 2.07
U2AF1-202ENST00000380276 SENP6Q9GZR1 1112 aaPredicted RBP27.96■■■□□ 2.07
U2AF1-202ENST00000380276 FRMPD3Q5JV73 1810 aa27.95■■■□□ 2.07
U2AF1-202ENST00000380276 CYP2D6P10635 497 aa27.95■■■□□ 2.06
U2AF1-202ENST00000380276 SAMD1Q6SPF0 538 aaPredicted RBP27.95■■■□□ 2.06
U2AF1-202ENST00000380276 LBX2Q6XYB7 198 aa27.95■■■□□ 2.06
U2AF1-202ENST00000380276 LCORLQ8N3X6 602 aa27.95■■■□□ 2.06
U2AF1-202ENST00000380276 NPLOC4Q8TAT6 608 aa27.95■■■□□ 2.06
U2AF1-202ENST00000380276 DDX20Q9UHI6 824 aaKnown RBP27.95■■■□□ 2.06
U2AF1-202ENST00000380276 CYP2C19P33261 490 aa27.94■■■□□ 2.06
U2AF1-202ENST00000380276 MDM2Q00987 491 aaPredicted RBP27.94■■■□□ 2.06
U2AF1-202ENST00000380276 GABPAQ06546 454 aa27.94■■■□□ 2.06
U2AF1-202ENST00000380276 GRB14Q14449 540 aa27.94■■■□□ 2.06
U2AF1-202ENST00000380276 DPP9Q86TI2 863 aa27.94■■■□□ 2.06
U2AF1-202ENST00000380276 SLC44A5Q8NCS7 719 aa27.94■■■□□ 2.06
U2AF1-202ENST00000380276 ARMT1Q9H993 441 aa27.94■■■□□ 2.06
U2AF1-202ENST00000380276 A0A1W2PRG0 241 aa27.93■■■□□ 2.06
U2AF1-202ENST00000380276 HMMRO75330 724 aa27.93■■■□□ 2.06
U2AF1-202ENST00000380276 COG2Q14746 738 aa27.93■■■□□ 2.06
U2AF1-202ENST00000380276 DEFB123Q8N688 67 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms