RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 TDRD7Q8NHU6 1098 aaKnown RBP4.67□□□□□ -1.66
BRCA2-201ENST00000380152 TACO1Q9BSH4 297 aaKnown RBP4.67□□□□□ -1.66
BRCA2-201ENST00000380152 MTUS1Q9ULD2 1270 aa4.67□□□□□ -1.66
BRCA2-201ENST00000380152 KCNJ18B7U540 433 aa4.67□□□□□ -1.66
BRCA2-201ENST00000380152 KCNK3O14649 394 aa4.67□□□□□ -1.66
BRCA2-201ENST00000380152 GJC1P36383 396 aa4.67□□□□□ -1.66
BRCA2-201ENST00000380152 KCNJ12Q14500 433 aa4.67□□□□□ -1.66
BRCA2-201ENST00000380152 NECTIN1Q15223 517 aa4.67□□□□□ -1.66
BRCA2-201ENST00000380152 INTS8Q75QN2 995 aaKnown RBP4.67□□□□□ -1.66
BRCA2-201ENST00000380152 RPGRIP1Q96KN7 1286 aa4.67□□□□□ -1.66
BRCA2-201ENST00000380152 FRMD4BQ9Y2L6 1034 aa4.67□□□□□ -1.66
BRCA2-201ENST00000380152 CASP8Q14790 479 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 UAP1Q16222 522 aaPredicted RBP4.66□□□□□ -1.66
BRCA2-201ENST00000380152 RRAGAQ7L523 313 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 AATFQ9NY61 560 aaKnown RBP eCLIP4.66□□□□□ -1.66
BRCA2-201ENST00000380152 ATP2A1O14983 1001 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 KRT40Q6A162 431 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 RPAINQ86UA6 219 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 FBXO18Q8NFZ0 1043 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 SAMSN1Q9NSI8 373 aaKnown RBP4.66□□□□□ -1.66
BRCA2-201ENST00000380152 TLR7Q9NYK1 1049 aaKnown RBP4.66□□□□□ -1.66
BRCA2-201ENST00000380152 PRDM1O75626 825 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 PAK2Q13177 524 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 SIRT1Q96EB6 747 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 JRKLQ9Y4A0 524 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 MORC2Q9Y6X9 1032 aaPredicted RBP4.66□□□□□ -1.66
BRCA2-201ENST00000380152 ATP10AO60312 1499 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 PLCD1P51178 756 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 IRX5P78411 483 aaPredicted RBP4.66□□□□□ -1.66
BRCA2-201ENST00000380152 SDR42E1Q8WUS8 393 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 RPGRQ92834 1020 aaKnown RBP4.66□□□□□ -1.66
BRCA2-201ENST00000380152 PTPN22Q9Y2R2 807 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 ATP5JP18859 108 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 GCKP35557 465 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 GUCY2DQ02846 1103 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 CLEC17AQ6ZS10 378 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 FERMT2Q96AC1 680 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 NAP1L3Q99457 506 aaPredicted RBP4.66□□□□□ -1.66
BRCA2-201ENST00000380152 C6orf50Q9HD87 102 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 ZBTB21Q9ULJ3 1066 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 E9PCH4 1651 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 KIAA0232Q92628 1395 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 USP27XA6NNY8 438 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 F8W031 263 aaPredicted RBP4.66□□□□□ -1.66
BRCA2-201ENST00000380152 EXOC5O00471 708 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 GNAQP50148 359 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 PTGDRQ13258 359 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 DZIP3Q86Y13 1208 aaKnown RBP4.66□□□□□ -1.66
BRCA2-201ENST00000380152 DDX12PQ92771 950 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.66□□□□□ -1.66
BRCA2-201ENST00000380152 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.66□□□□□ -1.66
BRCA2-201ENST00000380152 ABCB4P21439 1286 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 PLS1Q14651 629 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 RDH13Q8NBN7 331 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 BICD1Q96G01 975 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 CSRNP2Q9H175 543 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 NIP7Q9Y221 180 aaKnown RBP eCLIP4.66□□□□□ -1.66
BRCA2-201ENST00000380152 RTL9Q8NET4 1388 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 IRS4O14654 1257 aaPredicted RBP4.66□□□□□ -1.66
BRCA2-201ENST00000380152 PFKFB2O60825 505 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 A1BGP04217 495 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 GBP1P32455 592 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 DNM2P50570 870 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 CCDC84Q86UT8 332 aaPredicted RBP4.66□□□□□ -1.66
BRCA2-201ENST00000380152 NOSTRINQ8IVI9 506 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 SMC6Q96SB8 1091 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 ST7Q9NRC1 585 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 GJB4Q9NTQ9 266 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 ERVK-7P63135 1459 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 NEURL1BA8MQ27 555 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 TBC1D8O95759 1140 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 CCDC144BQ3MJ40 725 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 KRT71Q3SY84 523 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 MAEAQ7L5Y9 396 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 SYMPKQ92797 1274 aaKnown RBP4.66□□□□□ -1.66
BRCA2-201ENST00000380152 N4BP2L2Q92802 583 aaPredicted RBP4.66□□□□□ -1.66
BRCA2-201ENST00000380152 CDC23Q9UJX2 597 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 AGTPBP1Q9UPW5 1226 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 PCDHA5Q9Y5H7 936 aa4.66□□□□□ -1.66
BRCA2-201ENST00000380152 ATP8B1O43520 1251 aa4.65□□□□□ -1.66
BRCA2-201ENST00000380152 EEF2P13639 858 aaKnown RBP4.65□□□□□ -1.66
BRCA2-201ENST00000380152 CMA1P23946 247 aa4.65□□□□□ -1.66
BRCA2-201ENST00000380152 PPP1R2P41236 205 aa4.65□□□□□ -1.66
BRCA2-201ENST00000380152 ST5P78524 1137 aa4.65□□□□□ -1.66
BRCA2-201ENST00000380152 KLHL30Q0D2K2 578 aa4.65□□□□□ -1.66
BRCA2-201ENST00000380152 GCKRQ14397 625 aa4.65□□□□□ -1.66
BRCA2-201ENST00000380152 EXOC4Q96A65 974 aa4.65□□□□□ -1.66
BRCA2-201ENST00000380152 CEP104O60308 925 aa4.65□□□□□ -1.66
BRCA2-201ENST00000380152 GCNT3O95395 438 aa4.65□□□□□ -1.66
BRCA2-201ENST00000380152 TECP42680 631 aa4.65□□□□□ -1.66
BRCA2-201ENST00000380152 MAGEA1P43355 309 aa4.65□□□□□ -1.66
BRCA2-201ENST00000380152 RASSF2P50749 326 aa4.65□□□□□ -1.66
BRCA2-201ENST00000380152 EIF6P56537 245 aaKnown RBP4.65□□□□□ -1.66
BRCA2-201ENST00000380152 C2orf54Q08AI8 447 aa4.65□□□□□ -1.66
BRCA2-201ENST00000380152 DPH6Q7L8W6 267 aa4.65□□□□□ -1.66
BRCA2-201ENST00000380152 EYA2O00167 538 aa4.65□□□□□ -1.66
BRCA2-201ENST00000380152 ATP5DP30049 168 aa4.65□□□□□ -1.66
BRCA2-201ENST00000380152 TTC38Q5R3I4 469 aa4.65□□□□□ -1.66
BRCA2-201ENST00000380152 APBB1IPQ7Z5R6 666 aaPredicted RBP4.65□□□□□ -1.66
BRCA2-201ENST00000380152 GRAMD1CQ8IYS0 662 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms