RNA–Protein interactions for RNA: ENST00000379868.5

DDX58-201, Transcript of DExD/H-box helicase 58, humanhuman

TSL 5 BASIC

Gene DDX58, Length 4,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-201ENST00000379868 USP50Q70EL3 339 aaPredicted RBP6.5□□□□□ -1.37
DDX58-201ENST00000379868 KCTD1Q719H9 257 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 ANP32BQ92688 251 aaKnown RBP6.5□□□□□ -1.37
DDX58-201ENST00000379868 CDK5RAP3Q96JB5 506 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 TAF1DQ9H5J8 278 aaPredicted RBP6.5□□□□□ -1.37
DDX58-201ENST00000379868 SCN7AQ01118 1682 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 SPDYE3A6NKU9 549 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 USP17L5A8MUK1 530 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 GSG1L2A8MUP6 293 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 TRAF5O00463 557 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 ENTPD3O75355 529 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 TTLL1O95922 423 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 CFBP00751 764 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 SLC16A2P36021 539 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 AK2P54819 239 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 STK38Q15208 465 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 ANKRD13AQ8IZ07 590 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 SMC1BQ8NDV3 1235 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 ZSCAN10Q96SZ4 725 aaPredicted RBP6.5□□□□□ -1.37
DDX58-201ENST00000379868 MPHOSPH6Q99547 160 aaKnown RBP6.5□□□□□ -1.37
DDX58-201ENST00000379868 HERC5Q9UII4 1024 aaKnown RBP6.5□□□□□ -1.37
DDX58-201ENST00000379868 SAMM50Q9Y512 469 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 FIBPO43427 364 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 INPP5BP32019 993 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 PLCD1P51178 756 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 USP14P54578 494 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 ANAPC15P60006 121 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 MAP3K9P80192 1104 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 CSPP1Q1MSJ5 1256 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 CHADLQ6NUI6 762 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 RUFY3Q7L099 469 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 V9GY48 417 aaPredicted RBP6.5□□□□□ -1.37
DDX58-201ENST00000379868 CDK5RAP2Q96SN8 1893 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 KLRG2A4D1S0 409 aaPredicted RBP6.5□□□□□ -1.37
DDX58-201ENST00000379868 USP17L10C9JJH3 530 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 FMNL1O95466 1100 aaPredicted RBP6.5□□□□□ -1.37
DDX58-201ENST00000379868 TOP1P11387 765 aaKnown RBP6.5□□□□□ -1.37
DDX58-201ENST00000379868 CNGA1P29973 690 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 HMGN5P82970 282 aaKnown RBP6.5□□□□□ -1.37
DDX58-201ENST00000379868 TMEM132AQ24JP5 1023 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 L1TD1Q5T7N2 865 aaKnown RBP6.5□□□□□ -1.37
DDX58-201ENST00000379868 CTR9Q6PD62 1173 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 POTEDQ86YR6 584 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 ZNF654Q8IZM8 581 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 ANKRD35Q8N283 1001 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 ZNF512BQ96KM6 892 aaPredicted RBP6.5□□□□□ -1.37
DDX58-201ENST00000379868 ALG1Q9BT22 464 aa6.5□□□□□ -1.37
DDX58-201ENST00000379868 MYO5AQ9Y4I1 1855 aaKnown RBP6.49□□□□□ -1.37
DDX58-201ENST00000379868 KLRF2D3W0D1 207 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 AKR1B1P15121 316 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 OSBPP22059 807 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 RPS6KB1P23443 525 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 TAF1CQ15572 869 aaPredicted RBP6.49□□□□□ -1.37
DDX58-201ENST00000379868 LDHDQ86WU2 507 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 MAP4K1Q92918 833 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 ZHX3Q9H4I2 956 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 EHMT1Q9H9B1 1298 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 PKD2L1Q9P0L9 805 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 ZSWIM5Q9P217 1185 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 NMT2O60551 498 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 KCNA3P22001 575 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 LTBP1Q14766 1721 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 USP17L2Q6R6M4 530 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 MOB2Q70IA6 237 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 RASEFQ8IZ41 740 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 PHKBQ93100 1093 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 GZF1Q9H116 711 aaPredicted RBP6.49□□□□□ -1.37
DDX58-201ENST00000379868 DDTLA6NHG4 134 aaPredicted RBP6.49□□□□□ -1.37
DDX58-201ENST00000379868 CALML3P27482 149 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 ECE1P42892 770 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 NUCB2P80303 420 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 MTMR2Q13614 643 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 DPP9Q86TI2 863 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 CDCA5Q96FF9 252 aa6.49□□□□□ -1.37
DDX58-201ENST00000379868 NUP88Q99567 741 aaPredicted RBP6.49□□□□□ -1.37
DDX58-201ENST00000379868 EP400Q96L91 3159 aa6.48□□□□□ -1.37
DDX58-201ENST00000379868 CCL15-CCL14A0A0B4J2E2 113 aa6.48□□□□□ -1.37
DDX58-201ENST00000379868 KRT18P05783 430 aaKnown RBP6.48□□□□□ -1.37
DDX58-201ENST00000379868 MYCLP12524 364 aaPredicted RBP6.48□□□□□ -1.37
DDX58-201ENST00000379868 BMP3P12645 472 aa6.48□□□□□ -1.37
DDX58-201ENST00000379868 EEF2P13639 858 aaKnown RBP6.48□□□□□ -1.37
DDX58-201ENST00000379868 HSPA4P34932 840 aa6.48□□□□□ -1.37
DDX58-201ENST00000379868 CCNA1P78396 465 aa6.48□□□□□ -1.37
DDX58-201ENST00000379868 CCL15Q16663 113 aa6.48□□□□□ -1.37
DDX58-201ENST00000379868 ADCK5Q3MIX3 580 aa6.48□□□□□ -1.37
DDX58-201ENST00000379868 C12orf60Q5U649 245 aa6.48□□□□□ -1.37
DDX58-201ENST00000379868 APOBEC3HQ6NTF7 200 aaKnown RBP6.48□□□□□ -1.37
DDX58-201ENST00000379868 ADGRA1Q86SQ6 560 aa6.48□□□□□ -1.37
DDX58-201ENST00000379868 CEP95Q96GE4 821 aa6.48□□□□□ -1.37
DDX58-201ENST00000379868 UIMC1Q96RL1 719 aa6.48□□□□□ -1.37
DDX58-201ENST00000379868 RTFDC1Q9BY42 306 aaPredicted RBP6.48□□□□□ -1.37
DDX58-201ENST00000379868 PNMA3Q9UL41 463 aa6.48□□□□□ -1.37
DDX58-201ENST00000379868 ASTN2O75129 1339 aaPredicted RBP6.48□□□□□ -1.37
DDX58-201ENST00000379868 LAMB1P07942 1786 aa6.48□□□□□ -1.37
DDX58-201ENST00000379868 LY75O60449 1722 aa6.48□□□□□ -1.37
DDX58-201ENST00000379868 B4DLN1 442 aa6.48□□□□□ -1.37
DDX58-201ENST00000379868 ME1P48163 572 aa6.48□□□□□ -1.37
DDX58-201ENST00000379868 MRPL12P52815 198 aaKnown RBP6.48□□□□□ -1.37
DDX58-201ENST00000379868 DLK2Q6UY11 383 aa6.48□□□□□ -1.37
DDX58-201ENST00000379868 CCDC148Q8NFR7 591 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms