RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 AFG3L2Q9Y4W6 797 aa14.13□□□□□ -0.15
PCNA-201ENST00000379143 PHIPQ8WWQ0 1821 aa14.12□□□□□ -0.15
PCNA-201ENST00000379143 EPB41L2O43491 1005 aaKnown RBP14.12□□□□□ -0.15
PCNA-201ENST00000379143 PRDM1O75626 825 aa14.12□□□□□ -0.15
PCNA-201ENST00000379143 TSPY3P0CV98 308 aa14.12□□□□□ -0.15
PCNA-201ENST00000379143 TSPY8P0CW00 308 aa14.12□□□□□ -0.15
PCNA-201ENST00000379143 CETPP11597 493 aa14.12□□□□□ -0.15
PCNA-201ENST00000379143 AKR1B1P15121 316 aa14.12□□□□□ -0.15
PCNA-201ENST00000379143 MKRN3Q13064 507 aaKnown RBP14.12□□□□□ -0.15
PCNA-201ENST00000379143 PPP4R3BQ5MIZ7 849 aa14.12□□□□□ -0.15
PCNA-201ENST00000379143 CNNM2Q9H8M5 875 aa14.12□□□□□ -0.15
PCNA-201ENST00000379143 RBM8AQ9Y5S9 174 aaKnown RBP14.12□□□□□ -0.15
PCNA-201ENST00000379143 TESPA1A2RU30 521 aaPredicted RBP14.11□□□□□ -0.15
PCNA-201ENST00000379143 TSPY2A6NKD2 308 aa14.11□□□□□ -0.15
PCNA-201ENST00000379143 TM4SF4P48230 202 aa14.11□□□□□ -0.15
PCNA-201ENST00000379143 JAG1P78504 1218 aa14.11□□□□□ -0.15
PCNA-201ENST00000379143 SPP2Q13103 211 aa14.11□□□□□ -0.15
PCNA-201ENST00000379143 RNF20Q5VTR2 975 aa14.11□□□□□ -0.15
PCNA-201ENST00000379143 OTUD7BQ6GQQ9 843 aa14.11□□□□□ -0.15
PCNA-201ENST00000379143 FASTKD5Q7L8L6 764 aaKnown RBP14.11□□□□□ -0.15
PCNA-201ENST00000379143 MS4A4AQ96JQ5 239 aa14.11□□□□□ -0.15
PCNA-201ENST00000379143 BEGAINQ9BUH8 593 aa14.11□□□□□ -0.15
PCNA-201ENST00000379143 SH2D4AQ9H788 454 aa14.11□□□□□ -0.15
PCNA-201ENST00000379143 KANSL2Q9H9L4 492 aa14.11□□□□□ -0.15
PCNA-201ENST00000379143 TOMM22Q9NS69 142 aa14.11□□□□□ -0.15
PCNA-201ENST00000379143 PLIN4Q96Q06 1357 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 CCL15-CCL14A0A0B4J2E2 113 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 TRIM75PA6NK02 468 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 C19orf81C9J6K1 198 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 USP17L10C9JJH3 530 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 CYP21A2P08686 494 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 GUCY1A2P33402 732 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 BACE1P56817 501 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 TFAP4Q01664 338 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 ICA1Q05084 483 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 TRDNQ13061 729 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 SEPT2Q15019 361 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 CCL15Q16663 113 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 SHROOM1Q2M3G4 852 aaPredicted RBP14.1□□□□□ -0.15
PCNA-201ENST00000379143 TBC1D10CQ8IV04 446 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 NEDD1Q8NHV4 660 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 ESR2Q92731 530 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 KRT23Q9C075 422 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 NBPF3Q9H094 633 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 ARHGEF10LQ9HCE6 1279 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.1□□□□□ -0.15
PCNA-201ENST00000379143 TSKSQ9UJT2 592 aa14.1□□□□□ -0.15
PCNA-201ENST00000379143 GREB1LQ9C091 1923 aaPredicted RBP14.09□□□□□ -0.15
PCNA-201ENST00000379143 A0A0G2JLL6 359 aaPredicted RBP14.09□□□□□ -0.15
PCNA-201ENST00000379143 RANBP6O60518 1105 aaKnown RBP14.09□□□□□ -0.15
PCNA-201ENST00000379143 ALDH1A1P00352 501 aa14.09□□□□□ -0.15
PCNA-201ENST00000379143 USP14P54578 494 aa14.09□□□□□ -0.15
PCNA-201ENST00000379143 NECTIN1Q15223 517 aa14.09□□□□□ -0.15
PCNA-201ENST00000379143 SH3D19Q5HYK7 790 aa14.09□□□□□ -0.15
PCNA-201ENST00000379143 RRP12Q5JTH9 1297 aaKnown RBP14.09□□□□□ -0.15
PCNA-201ENST00000379143 PRRT2Q7Z6L0 340 aaPredicted RBP14.09□□□□□ -0.15
PCNA-201ENST00000379143 CCDC84Q86UT8 332 aaPredicted RBP14.09□□□□□ -0.15
PCNA-201ENST00000379143 PROCA1Q8NCQ7 364 aaPredicted RBP14.09□□□□□ -0.15
PCNA-201ENST00000379143 FEZ1Q99689 392 aa14.09□□□□□ -0.15
PCNA-201ENST00000379143 KIAA1683Q9H0B3 1180 aa14.09□□□□□ -0.15
PCNA-201ENST00000379143 ZCCHC17Q9NP64 241 aaKnown RBP14.09□□□□□ -0.15
PCNA-201ENST00000379143 PCDH10Q9P2E7 1040 aa14.09□□□□□ -0.15
PCNA-201ENST00000379143 MTMR2Q13614 643 aa14.08□□□□□ -0.16
PCNA-201ENST00000379143 FAM47AQ5JRC9 791 aa14.08□□□□□ -0.16
PCNA-201ENST00000379143 ZIC5Q96T25 663 aa14.08□□□□□ -0.16
PCNA-201ENST00000379143 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.08□□□□□ -0.16
PCNA-201ENST00000379143 INCENPQ9NQS7 918 aa14.08□□□□□ -0.16
PCNA-201ENST00000379143 TMOD4Q9NZQ9 345 aa14.08□□□□□ -0.16
PCNA-201ENST00000379143 NYAP2Q9P242 653 aa14.08□□□□□ -0.16
PCNA-201ENST00000379143 SYNPO2Q9UMS6 1093 aa14.08□□□□□ -0.16
PCNA-201ENST00000379143 IGKV6D-41A0A0C4DH26 115 aa14.07□□□□□ -0.16
PCNA-201ENST00000379143 SLC27A2O14975 620 aa14.07□□□□□ -0.16
PCNA-201ENST00000379143 CA12O43570 354 aa14.07□□□□□ -0.16
PCNA-201ENST00000379143 TTLL1O95922 423 aa14.07□□□□□ -0.16
PCNA-201ENST00000379143 ZKSCAN1P17029 563 aaPredicted RBP14.07□□□□□ -0.16
PCNA-201ENST00000379143 PABPC4Q13310 644 aaKnown RBP eCLIP14.07□□□□□ -0.163e-31■■■□□ 16.3
PCNA-201ENST00000379143 CCDC178Q5BJE1 867 aa14.07□□□□□ -0.16
PCNA-201ENST00000379143 CREB3L3Q68CJ9 461 aa14.07□□□□□ -0.16
PCNA-201ENST00000379143 USP17L2Q6R6M4 530 aa14.07□□□□□ -0.16
PCNA-201ENST00000379143 RALYLQ86SE5 291 aaKnown RBP14.07□□□□□ -0.16
PCNA-201ENST00000379143 IQCA1Q86XH1 822 aa14.07□□□□□ -0.16
PCNA-201ENST00000379143 IFNL1Q8IU54 200 aa14.07□□□□□ -0.16
PCNA-201ENST00000379143 BRI3BPQ8WY22 251 aa14.07□□□□□ -0.16
PCNA-201ENST00000379143 CEP95Q96GE4 821 aa14.07□□□□□ -0.16
PCNA-201ENST00000379143 TCP11L1Q9NUJ3 509 aa14.07□□□□□ -0.16
PCNA-201ENST00000379143 MTMR4Q9NYA4 1195 aa14.07□□□□□ -0.16
PCNA-201ENST00000379143 TMX2Q9Y320 296 aa14.07□□□□□ -0.16
PCNA-201ENST00000379143 TACC3Q9Y6A5 838 aa14.07□□□□□ -0.16
PCNA-201ENST00000379143 PTPRFP10586 1907 aa14.07□□□□□ -0.16
PCNA-201ENST00000379143 NEDD4P46934 1319 aa14.07□□□□□ -0.16
PCNA-201ENST00000379143 LOC285556D6RIA3 1793 aa14.06□□□□□ -0.16
PCNA-201ENST00000379143 E7EWF7 191 aa14.06□□□□□ -0.16
PCNA-201ENST00000379143 EEF2P13639 858 aaKnown RBP14.06□□□□□ -0.16
PCNA-201ENST00000379143 HMGCS2P54868 508 aa14.06□□□□□ -0.16
PCNA-201ENST00000379143 ATP2B2Q01814 1243 aa14.06□□□□□ -0.16
PCNA-201ENST00000379143 GADL1Q6ZQY3 521 aa14.06□□□□□ -0.16
PCNA-201ENST00000379143 ANKRD23Q86SG2 305 aa14.06□□□□□ -0.16
PCNA-201ENST00000379143 NCOA7Q8NI08 942 aa14.06□□□□□ -0.16
PCNA-201ENST00000379143 C12orf42Q96LP6 360 aa14.06□□□□□ -0.16
PCNA-201ENST00000379143 TTC14Q96N46 770 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms