RNA–Protein interactions for RNA: ENST00000378887.3

SDHAF1-201, Transcript of succinate dehydrogenase complex assembly factor 1, humanhuman

APPRIS P1 BASIC

Gene SDHAF1, Length 1,117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF1-201ENST00000378887 MGAMO43451 1857 aa28.36■■■□□ 2.13
SDHAF1-201ENST00000378887 USP17L10C9JJH3 530 aa28.35■■■□□ 2.13
SDHAF1-201ENST00000378887 HOXA7P31268 230 aaPredicted RBP28.35■■■□□ 2.13
SDHAF1-201ENST00000378887 ALX1Q15699 326 aa28.35■■■□□ 2.13
SDHAF1-201ENST00000378887 OTOP1Q7RTM1 612 aa28.35■■■□□ 2.13
SDHAF1-201ENST00000378887 CPA4Q9UI42 421 aa28.35■■■□□ 2.13
SDHAF1-201ENST00000378887 LAMA4Q16363 1823 aa28.34■■■□□ 2.13
SDHAF1-201ENST00000378887 IGKV6D-41A0A0C4DH26 115 aa28.34■■■□□ 2.13
SDHAF1-201ENST00000378887 TRIM6-TRIM34B2RNG4 842 aa28.34■■■□□ 2.13
SDHAF1-201ENST00000378887 MCMDC2Q4G0Z9 681 aa28.34■■■□□ 2.13
SDHAF1-201ENST00000378887 IFFO2Q5TF58 517 aa28.34■■■□□ 2.13
SDHAF1-201ENST00000378887 ABHD8Q96I13 439 aa28.34■■■□□ 2.13
SDHAF1-201ENST00000378887 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.34■■■□□ 2.13
SDHAF1-201ENST00000378887 A0A0G2JMZ2 1700 aa28.33■■■□□ 2.13
SDHAF1-201ENST00000378887 C19orf81C9J6K1 198 aa28.33■■■□□ 2.13
SDHAF1-201ENST00000378887 TMEM179Q6ZVK1 233 aa28.33■■■□□ 2.13
SDHAF1-201ENST00000378887 RILPL2Q969X0 211 aa28.33■■■□□ 2.13
SDHAF1-201ENST00000378887 PARK7Q99497 189 aaKnown RBP28.33■■■□□ 2.13
SDHAF1-201ENST00000378887 NBPF3Q9H094 633 aa28.33■■■□□ 2.13
SDHAF1-201ENST00000378887 ZMYM6O95789 1325 aa28.33■■■□□ 2.13
SDHAF1-201ENST00000378887 LACTBP83111 547 aaPredicted RBP28.32■■■□□ 2.12
SDHAF1-201ENST00000378887 RAB3GAP1Q15042 981 aa28.32■■■□□ 2.12
SDHAF1-201ENST00000378887 NKX2-3Q8TAU0 364 aa28.32■■■□□ 2.12
SDHAF1-201ENST00000378887 CCDC17Q96LX7 622 aa28.32■■■□□ 2.12
SDHAF1-201ENST00000378887 ASCC2Q9H1I8 757 aaPredicted RBP28.32■■■□□ 2.12
SDHAF1-201ENST00000378887 CCDC171Q6TFL3 1326 aa28.32■■■□□ 2.12
SDHAF1-201ENST00000378887 FGRP09769 529 aa28.31■■■□□ 2.12
SDHAF1-201ENST00000378887 HSPD1P10809 573 aaKnown RBP28.31■■■□□ 2.12
SDHAF1-201ENST00000378887 ANAPC4Q9UJX5 808 aa28.31■■■□□ 2.12
SDHAF1-201ENST00000378887 PLIN4Q96Q06 1357 aa28.31■■■□□ 2.12
SDHAF1-201ENST00000378887 DOCK3Q8IZD9 2030 aa28.31■■■□□ 2.12
SDHAF1-201ENST00000378887 MINDY4BA8MYZ0 360 aa28.3■■■□□ 2.12
SDHAF1-201ENST00000378887 TDO2P48775 406 aa28.3■■■□□ 2.12
SDHAF1-201ENST00000378887 PPARAQ07869 468 aa28.3■■■□□ 2.12
SDHAF1-201ENST00000378887 FGAP02671 866 aa28.29■■■□□ 2.12
SDHAF1-201ENST00000378887 VCAM1P19320 739 aa28.29■■■□□ 2.12
SDHAF1-201ENST00000378887 USP17L2Q6R6M4 530 aa28.29■■■□□ 2.12
SDHAF1-201ENST00000378887 CENPQQ7L2Z9 268 aaPredicted RBP28.29■■■□□ 2.12
SDHAF1-201ENST00000378887 ERO1AQ96HE7 468 aa28.29■■■□□ 2.12
SDHAF1-201ENST00000378887 DDRGK1Q96HY6 314 aa28.29■■■□□ 2.12
SDHAF1-201ENST00000378887 INCENPQ9NQS7 918 aa28.29■■■□□ 2.12
SDHAF1-201ENST00000378887 PLXNB2O15031 1838 aa28.29■■■□□ 2.12
SDHAF1-201ENST00000378887 TRIM47Q96LD4 638 aa28.28■■■□□ 2.12
SDHAF1-201ENST00000378887 CABP5Q9NP86 173 aa28.28■■■□□ 2.12
SDHAF1-201ENST00000378887 TMX2Q9Y320 296 aa28.28■■■□□ 2.12
SDHAF1-201ENST00000378887 PEX10O60683 326 aa28.27■■■□□ 2.12
SDHAF1-201ENST00000378887 APPP05067 770 aa28.27■■■□□ 2.12
SDHAF1-201ENST00000378887 NAPBQ9H115 298 aa28.27■■■□□ 2.12
SDHAF1-201ENST00000378887 TXNRD2Q9NNW7 524 aa28.27■■■□□ 2.12
SDHAF1-201ENST00000378887 PRDM1O75626 825 aa28.26■■■□□ 2.11
SDHAF1-201ENST00000378887 STK11IPQ8N1F8 1099 aa28.26■■■□□ 2.11
SDHAF1-201ENST00000378887 P2RX7Q99572 595 aaKnown RBP28.26■■■□□ 2.11
SDHAF1-201ENST00000378887 MPHOSPH10O00566 681 aaKnown RBP28.25■■■□□ 2.11
SDHAF1-201ENST00000378887 ICA1Q05084 483 aa28.25■■■□□ 2.11
SDHAF1-201ENST00000378887 ZYXQ15942 572 aaKnown RBP28.25■■■□□ 2.11
SDHAF1-201ENST00000378887 FBXO46Q6PJ61 603 aaPredicted RBP28.25■■■□□ 2.11
SDHAF1-201ENST00000378887 CWC27Q6UX04 472 aaKnown RBP28.25■■■□□ 2.11
SDHAF1-201ENST00000378887 AMOTL1Q8IY63 956 aa28.25■■■□□ 2.11
SDHAF1-201ENST00000378887 NACAP1Q9BZK3 213 aa28.25■■■□□ 2.11
SDHAF1-201ENST00000378887 MORF4L1Q9UBU8 362 aa28.25■■■□□ 2.11
SDHAF1-201ENST00000378887 HPS5Q9UPZ3 1129 aa28.25■■■□□ 2.11
SDHAF1-201ENST00000378887 TRIM17Q9Y577 477 aa28.25■■■□□ 2.11
SDHAF1-201ENST00000378887 MYH4Q9Y623 1939 aa28.25■■■□□ 2.11
SDHAF1-201ENST00000378887 CNMDO75829 334 aa28.24■■■□□ 2.11
SDHAF1-201ENST00000378887 EEF2P13639 858 aaKnown RBP28.24■■■□□ 2.11
SDHAF1-201ENST00000378887 NOVP48745 357 aa28.24■■■□□ 2.11
SDHAF1-201ENST00000378887 CTDSPL2Q05D32 466 aa28.24■■■□□ 2.11
SDHAF1-201ENST00000378887 PKN2Q16513 984 aaKnown RBP28.24■■■□□ 2.11
SDHAF1-201ENST00000378887 FAM110CQ1W6H9 321 aa28.24■■■□□ 2.11
SDHAF1-201ENST00000378887 TMOD4Q9NZQ9 345 aa28.24■■■□□ 2.11
SDHAF1-201ENST00000378887 PTPN22Q9Y2R2 807 aa28.24■■■□□ 2.11
SDHAF1-201ENST00000378887 CHMLP26374 656 aa28.23■■■□□ 2.11
SDHAF1-201ENST00000378887 HERVK_113P62684 666 aa28.23■■■□□ 2.11
SDHAF1-201ENST00000378887 CATSPERGQ6ZRH7 1159 aa28.23■■■□□ 2.11
SDHAF1-201ENST00000378887 EFCC1Q9HA90 598 aa28.23■■■□□ 2.11
SDHAF1-201ENST00000378887 RBPJLQ9UBG7 517 aa28.23■■■□□ 2.11
SDHAF1-201ENST00000378887 USP14P54578 494 aa28.22■■■□□ 2.11
SDHAF1-201ENST00000378887 LBX2Q6XYB7 198 aa28.22■■■□□ 2.11
SDHAF1-201ENST00000378887 KANSL2Q9H9L4 492 aa28.22■■■□□ 2.11
SDHAF1-201ENST00000378887 PNMA3Q9UL41 463 aa28.22■■■□□ 2.11
SDHAF1-201ENST00000378887 TBC1D10CQ8IV04 446 aa28.21■■■□□ 2.11
SDHAF1-201ENST00000378887 ANKRD13CQ8N6S4 541 aa28.21■■■□□ 2.11
SDHAF1-201ENST00000378887 NEDD1Q8NHV4 660 aa28.21■■■□□ 2.11
SDHAF1-201ENST00000378887 FEZ1Q99689 392 aa28.21■■■□□ 2.11
SDHAF1-201ENST00000378887 VCPKMTQ9H867 229 aa28.21■■■□□ 2.11
SDHAF1-201ENST00000378887 IL17RBQ9NRM6 502 aa28.21■■■□□ 2.11
SDHAF1-201ENST00000378887 MKI67P46013 3256 aaKnown RBP28.21■■■□□ 2.11
SDHAF1-201ENST00000378887 ORC4O43929 436 aa28.2■■■□□ 2.1
SDHAF1-201ENST00000378887 CEP95Q96GE4 821 aa28.2■■■□□ 2.1
SDHAF1-201ENST00000378887 DIAPH3Q9NSV4 1193 aa28.2■■■□□ 2.1
SDHAF1-201ENST00000378887 NYAP2Q9P242 653 aa28.2■■■□□ 2.1
SDHAF1-201ENST00000378887 SPDYE16A6NNV3 312 aaPredicted RBP28.19■■■□□ 2.1
SDHAF1-201ENST00000378887 HIP1O00291 1037 aa28.19■■■□□ 2.1
SDHAF1-201ENST00000378887 OSBPP22059 807 aa28.19■■■□□ 2.1
SDHAF1-201ENST00000378887 PSMC4P43686 418 aa28.19■■■□□ 2.1
SDHAF1-201ENST00000378887 GCLCP48506 637 aaPredicted RBP28.19■■■□□ 2.1
SDHAF1-201ENST00000378887 PABPC4Q13310 644 aaKnown RBP eCLIP28.19■■■□□ 2.11e-11■■□□□ 12.9
SDHAF1-201ENST00000378887 SMCR8Q8TEV9 937 aaPredicted RBP28.19■■■□□ 2.1
SDHAF1-201ENST00000378887 MKL1Q969V6 931 aa28.19■■■□□ 2.1
SDHAF1-201ENST00000378887 RPAP3Q9H6T3 665 aaPredicted RBP28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms