RNA–Protein interactions for RNA: ENST00000378752.7

OPTN-204, Transcript of optineurin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene OPTN, Length 3,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-204ENST00000378752 TSPYL1Q9H0U9 437 aa10.39□□□□□ -0.75
OPTN-204ENST00000378752 ZNHIT6Q9NWK9 470 aaKnown RBP10.39□□□□□ -0.75
OPTN-204ENST00000378752 MMP1P03956 469 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 MTIF2P46199 727 aaKnown RBP10.38□□□□□ -0.75
OPTN-204ENST00000378752 LIG3P49916 1009 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 CCDC96Q2M329 555 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 FAM47AQ5JRC9 791 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 AKNAD1Q5T1N1 836 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 IFIT1BQ5T764 474 aaKnown RBP10.38□□□□□ -0.75
OPTN-204ENST00000378752 CNGA4Q8IV77 575 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 LCORLQ8N3X6 602 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 TMEM87BQ96K49 555 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 AGXT2Q9BYV1 514 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 LY9Q9HBG7 655 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 ASAP1Q9ULH1 1129 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 MYO6Q9UM54 1294 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 TOB1P50616 345 aaPredicted RBP10.38□□□□□ -0.75
OPTN-204ENST00000378752 PTGDRQ13258 359 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 TTC31Q49AM3 519 aaPredicted RBP10.38□□□□□ -0.75
OPTN-204ENST00000378752 CCDC70Q6NSX1 233 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 NELFBQ8WX92 580 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 GBP3Q9H0R5 595 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 VAT1LQ9HCJ6 419 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 CCDC196A0A1B0GTZ2 297 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 FOXP2O15409 715 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 RNF40O75150 1001 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 ATP2C2O75185 946 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 STAT6P42226 847 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 ARID5AQ03989 594 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 BRD3Q15059 726 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 CCDC24Q8N4L8 307 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 GOLGA5Q8TBA6 731 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 ENOX1Q8TC92 643 aaKnown RBP10.38□□□□□ -0.75
OPTN-204ENST00000378752 SAMM50Q9Y512 469 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 FMN2Q9NZ56 1722 aa10.38□□□□□ -0.75
OPTN-204ENST00000378752 PATL2C9JE40 543 aaKnown RBP10.37□□□□□ -0.75
OPTN-204ENST00000378752 ZNF185O15231 689 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 PLEKHA8P1O95397 391 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 DEXIO95424 95 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 SSBP05455 408 aaKnown RBP eCLIP10.37□□□□□ -0.75
OPTN-204ENST00000378752 IDEP14735 1019 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 KRT2P35908 639 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 SLC7A5Q01650 507 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 TCIRG1Q13488 830 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 TTF1Q15361 905 aaPredicted RBP10.37□□□□□ -0.75
OPTN-204ENST00000378752 SPATA1Q5VX52 437 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 KANK3Q6NY19 840 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 CATIPQ7Z7H3 387 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 FANCBQ8NB91 859 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 LUC7L2Q9Y383 392 aaKnown RBP10.37□□□□□ -0.75
OPTN-204ENST00000378752 PIK3C2AO00443 1686 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 TNKSO95271 1327 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 PTPREP23469 700 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 ATP1A2P50993 1020 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 ATP2B2Q01814 1243 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 PPARAQ07869 468 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 KRT31Q15323 416 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 KCTD16Q68DU8 428 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 AFAP1L1Q8TED9 768 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 MAP3K14Q99558 947 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 HPSEQ9Y251 543 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 MYO1BO43795 1136 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 MFAP3LO75121 409 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 CCT5P48643 541 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 C2orf54Q08AI8 447 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 CUL4BQ13620 913 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 SND1Q7KZF4 910 aaKnown RBP eCLIP10.37□□□□□ -0.75
OPTN-204ENST00000378752 TMEM139Q8IV31 216 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 SPATA5Q8NB90 893 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 KRT23Q9C075 422 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 SMARCAL1Q9NZC9 954 aa10.37□□□□□ -0.75
OPTN-204ENST00000378752 FBXO2Q9UK22 296 aaPredicted RBP10.37□□□□□ -0.75
OPTN-204ENST00000378752 KCNJ18B7U540 433 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 MARCH6O60337 910 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 SLC5A1P13866 664 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 PIP4K2BP78356 416 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 MORC3Q14149 939 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 KCNJ12Q14500 433 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 TDRD12Q587J7 1177 aaKnown RBP10.36□□□□□ -0.75
OPTN-204ENST00000378752 EARS2Q5JPH6 523 aaKnown RBP10.36□□□□□ -0.75
OPTN-204ENST00000378752 TTC38Q5R3I4 469 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 CTCFLQ8NI51 663 aaPredicted RBP10.36□□□□□ -0.75
OPTN-204ENST00000378752 SMCR8Q8TEV9 937 aaPredicted RBP10.36□□□□□ -0.75
OPTN-204ENST00000378752 GPKOWQ92917 476 aaPredicted RBP eCLIP10.36□□□□□ -0.75
OPTN-204ENST00000378752 PAGE5Q96GU1 130 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 NBPF3Q9H094 633 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 ANKZF1Q9H8Y5 726 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 A0A087X0B3 334 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 PP2D1A8MPX8 630 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 NMT2O60551 498 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 CASP7P55210 303 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 PAK1Q13153 545 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 IGDCC4Q8TDY8 1250 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 IFT81Q8WYA0 676 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 EXOC4Q96A65 974 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 KIFC2Q96AC6 838 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 CTAGE1Q96RT6 745 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 STRBPQ96SI9 672 aaKnown RBP10.36□□□□□ -0.75
OPTN-204ENST00000378752 ZHX3Q9H4I2 956 aa10.36□□□□□ -0.75
OPTN-204ENST00000378752 EPN1Q9Y6I3 576 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms