RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 TTC41PQ6P2S7 1318 aa12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 SNUPNO95149 360 aaKnown RBP12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 CHMLP26374 656 aa12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 PUM3Q15397 648 aaKnown RBP12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 TMCO3Q6UWJ1 677 aa12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 TADA2BQ86TJ2 420 aa12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 OGFOD1Q8N543 542 aa12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 RBM17Q96I25 401 aaKnown RBP12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 VPS18Q9P253 973 aa12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 RABL2BQ9UNT1 228 aa12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 MFSD6Q6ZSS7 791 aa12.26□□□□□ -0.45
PCDHGA1-201ENST00000378105 TRIM42Q8IWZ5 723 aa12.26□□□□□ -0.45
PCDHGA1-201ENST00000378105 SSH3Q8TE77 659 aa12.26□□□□□ -0.45
PCDHGA1-201ENST00000378105 H0YIN7 160 aa12.26□□□□□ -0.45
PCDHGA1-201ENST00000378105 HIBADHP31937 336 aaKnown RBP12.26□□□□□ -0.45
PCDHGA1-201ENST00000378105 NEDD9Q14511 834 aa12.26□□□□□ -0.45
PCDHGA1-201ENST00000378105 GYG1P46976 350 aa12.26□□□□□ -0.45
PCDHGA1-201ENST00000378105 SLC7A5Q01650 507 aa12.26□□□□□ -0.45
PCDHGA1-201ENST00000378105 NKX1-1Q15270 411 aaPredicted RBP12.26□□□□□ -0.45
PCDHGA1-201ENST00000378105 TMEM67Q5HYA8 995 aa12.26□□□□□ -0.45
PCDHGA1-201ENST00000378105 SLF2Q8IX21 1173 aa12.26□□□□□ -0.45
PCDHGA1-201ENST00000378105 JDP2Q8WYK2 163 aa12.26□□□□□ -0.45
PCDHGA1-201ENST00000378105 SPDL1Q96EA4 605 aa12.26□□□□□ -0.45
PCDHGA1-201ENST00000378105 CRNKL1Q9BZJ0 848 aaKnown RBP12.26□□□□□ -0.45
PCDHGA1-201ENST00000378105 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.26□□□□□ -0.45
PCDHGA1-201ENST00000378105 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.26□□□□□ -0.45
PCDHGA1-201ENST00000378105 PCDHGA4Q9Y5G9 962 aa12.26□□□□□ -0.45
PCDHGA1-201ENST00000378105 SLC12A7Q9Y666 1083 aa12.26□□□□□ -0.45
PCDHGA1-201ENST00000378105 EYSQ5T1H1 3165 aa12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 ANKRD33BA6NCL7 494 aa12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 ZAP70P43403 619 aa12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 ME1P48163 572 aa12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 DBN1Q16643 649 aa12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 MARCH10Q8NA82 808 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 EIF4E1BA6NMX2 242 aaKnown RBP12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 GOLGA6L19H0YKK7 550 aa12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 FMNL1O95466 1100 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 PCCAP05165 728 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 ZSCAN31Q96LW9 406 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 CCDC43Q96MW1 224 aaKnown RBP12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 BAG1Q99933 345 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 ANKRD2Q9GZV1 360 aa12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 UBAP1Q9NZ09 502 aa12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 LIMCH1Q9UPQ0 1083 aa12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 SPATA31A5Q5VU36 1347 aa12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 SPATA31A7Q8IWB4 1347 aa12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 SNAP23O00161 211 aa12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 LDHBP07195 334 aaKnown RBP12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 ZFYP08048 801 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 CDC25CP30307 473 aa12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 SMC1AQ14683 1233 aaKnown RBP12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 SOGA3Q5TF21 947 aa12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 DPP8Q6V1X1 898 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 IRX2Q9BZI1 471 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 MCM9Q9NXL9 1143 aa12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 GGA1Q9UJY5 639 aa12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 ARFGEF1Q9Y6D6 1849 aa12.25□□□□□ -0.45
PCDHGA1-201ENST00000378105 RNF113AO15541 343 aaKnown RBP12.24□□□□□ -0.45
PCDHGA1-201ENST00000378105 MBD4O95243 580 aa12.24□□□□□ -0.45
PCDHGA1-201ENST00000378105 NLRP10Q86W26 655 aa12.24□□□□□ -0.45
PCDHGA1-201ENST00000378105 ATF5Q9Y2D1 282 aaPredicted RBP12.24□□□□□ -0.45
PCDHGA1-201ENST00000378105 GJA3Q9Y6H8 435 aa12.24□□□□□ -0.45
PCDHGA1-201ENST00000378105 SPATA31A1Q5TZJ5 1347 aa12.24□□□□□ -0.45
PCDHGA1-201ENST00000378105 ZBED6P86452 979 aa12.24□□□□□ -0.45
PCDHGA1-201ENST00000378105 REXO1L1PQ8IX06 675 aa12.24□□□□□ -0.45
PCDHGA1-201ENST00000378105 RNF41Q9H4P4 317 aaPredicted RBP12.24□□□□□ -0.45
PCDHGA1-201ENST00000378105 NRBP1Q9UHY1 535 aa12.24□□□□□ -0.45
PCDHGA1-201ENST00000378105 WDR33Q9C0J8 1336 aaKnown RBP12.24□□□□□ -0.45
PCDHGA1-201ENST00000378105 AKAP11Q9UKA4 1901 aa12.24□□□□□ -0.45
PCDHGA1-201ENST00000378105 ERFEQ4G0M1 354 aa12.24□□□□□ -0.45
PCDHGA1-201ENST00000378105 TSGA10Q9BZW7 698 aa12.24□□□□□ -0.45
PCDHGA1-201ENST00000378105 ZSCAN16Q9H4T2 348 aaPredicted RBP12.24□□□□□ -0.45
PCDHGA1-201ENST00000378105 ZNF287Q9HBT7 754 aa12.24□□□□□ -0.45
PCDHGA1-201ENST00000378105 MAGEB6P1A0A0J9YX57 407 aa12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 GOLGA8AA7E2F4 631 aa12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 GCFC2P16383 781 aaKnown RBP12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 CORO7P57737 925 aa12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 PTF1AQ7RTS3 328 aa12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 TAF4BQ92750 862 aa12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 ZNF189O75820 626 aaPredicted RBP12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 IGKV5-2P06315 115 aa12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 BCAMP50895 628 aa12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 NCOA7Q8NI08 942 aa12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 LPIN2Q92539 896 aa12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 TLR7Q9NYK1 1049 aaKnown RBP12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 BCS1LQ9Y276 419 aa12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 DUOX1Q9NRD9 1551 aa12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 SMAPO00193 183 aa12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 SERPINB2P05120 415 aa12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 AMIGO3Q86WK7 504 aa12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 TRIM11Q96F44 468 aa12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 SLC4A9Q96Q91 983 aa12.23□□□□□ -0.45
PCDHGA1-201ENST00000378105 NBPF26B4DH59 902 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 PRDM1O75626 825 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 CDKL5O76039 1030 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 SSBP05455 408 aaKnown RBP eCLIP12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 RXRAP19793 462 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 WDR78Q5VTH9 848 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 SUSD4Q5VX71 490 aa12.22□□□□□ -0.45
PCDHGA1-201ENST00000378105 KCNV1Q6PIU1 500 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms