RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 NBPF11Q86T75 865 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 ANO3Q9BYT9 981 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 XDHP47989 1333 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 USP14P54578 494 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 MICAL1Q8TDZ2 1067 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 SDR42E1Q8WUS8 393 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 SPAG5Q96R06 1193 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 TYRO3Q06418 890 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 SYNE4Q8N205 404 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 FBF1Q8TES7 1133 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 DBNLQ9UJU6 430 aaKnown RBP12.09□□□□□ -0.47
HIF3A-205ENST00000377670 SERPINA10Q9UK55 444 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 OPA1O60313 960 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 ZBTB38Q8NAP3 1195 aaPredicted RBP12.09□□□□□ -0.47
HIF3A-205ENST00000377670 MASTLQ96GX5 879 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 EBAG9O00559 213 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 SPTLC2O15270 562 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 KCNA4P22459 653 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 FAM47AQ5JRC9 791 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 SMIM5Q71RC9 77 aa12.09□□□□□ -0.47
HIF3A-205ENST00000377670 IBTKQ9P2D0 1353 aaPredicted RBP12.08□□□□□ -0.47
HIF3A-205ENST00000377670 U2AF2P26368 475 aaKnown RBP eCLIP12.08□□□□□ -0.48
HIF3A-205ENST00000377670 CERKLQ49MI3 558 aaPredicted RBP12.08□□□□□ -0.48
HIF3A-205ENST00000377670 CCDC121Q6ZUS5 278 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 RETREG2Q8NC44 543 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 ANTXR1Q9H6X2 564 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 ABCA9Q8IUA7 1624 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 MADDQ8WXG6 1647 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 CTAGE9A4FU28 777 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 CCDC6Q16204 474 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 MRPS27Q92552 414 aaKnown RBP12.08□□□□□ -0.48
HIF3A-205ENST00000377670 COA7Q96BR5 231 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 TESPA1A2RU30 521 aaPredicted RBP12.08□□□□□ -0.48
HIF3A-205ENST00000377670 ARHGEF35A5YM69 484 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 ATP5JP18859 108 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 PHKA1P46020 1223 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 SLFNL1Q499Z3 407 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 C6orf163Q5TEZ5 329 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.08□□□□□ -0.48
HIF3A-205ENST00000377670 ADGRL3Q9HAR2 1447 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 SNAP23O00161 211 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 CD2BP2O95400 341 aaKnown RBP12.08□□□□□ -0.48
HIF3A-205ENST00000377670 DNAJC21Q5F1R6 531 aaKnown RBP12.08□□□□□ -0.48
HIF3A-205ENST00000377670 WDR44Q5JSH3 913 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 GADD45BO75293 160 aaPredicted RBP12.08□□□□□ -0.48
HIF3A-205ENST00000377670 RHOXF2BP0C7M4 288 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 KARSQ15046 597 aaKnown RBP12.08□□□□□ -0.48
HIF3A-205ENST00000377670 RHOXF2Q9BQY4 288 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 EXOC7Q9UPT5 735 aa12.08□□□□□ -0.48
HIF3A-205ENST00000377670 FSD2A1L4K1 749 aa12.07□□□□□ -0.48
HIF3A-205ENST00000377670 STX17P56962 302 aa12.07□□□□□ -0.48
HIF3A-205ENST00000377670 ANGEL1Q9UNK9 670 aaKnown RBP12.07□□□□□ -0.48
HIF3A-205ENST00000377670 MAP3K15Q6ZN16 1313 aa12.07□□□□□ -0.48
HIF3A-205ENST00000377670 ME3Q16798 604 aa12.07□□□□□ -0.48
HIF3A-205ENST00000377670 CDC37L1Q7L3B6 337 aa12.07□□□□□ -0.48
HIF3A-205ENST00000377670 CAPZA3Q96KX2 299 aa12.07□□□□□ -0.48
HIF3A-205ENST00000377670 SPATA31A6Q5VVP1 1343 aa12.07□□□□□ -0.48
HIF3A-205ENST00000377670 CDK12Q9NYV4 1490 aaPredicted RBP12.07□□□□□ -0.48
HIF3A-205ENST00000377670 PPRC1Q5VV67 1664 aaKnown RBP12.07□□□□□ -0.48
HIF3A-205ENST00000377670 AKR1B10O60218 316 aa12.07□□□□□ -0.48
HIF3A-205ENST00000377670 ZNF174Q15697 407 aa12.07□□□□□ -0.48
HIF3A-205ENST00000377670 UTP14CQ5TAP6 766 aaKnown RBP12.07□□□□□ -0.48
HIF3A-205ENST00000377670 RRAGBQ5VZM2 374 aa12.07□□□□□ -0.48
HIF3A-205ENST00000377670 NSRP1Q9H0G5 558 aaKnown RBP12.07□□□□□ -0.48
HIF3A-205ENST00000377670 CD2APQ9Y5K6 639 aa12.07□□□□□ -0.48
HIF3A-205ENST00000377670 V9GY48 417 aaPredicted RBP12.07□□□□□ -0.48
HIF3A-205ENST00000377670 ARAP3Q8WWN8 1544 aa12.07□□□□□ -0.48
HIF3A-205ENST00000377670 TRIM75PA6NK02 468 aa12.07□□□□□ -0.48
HIF3A-205ENST00000377670 ADCK5Q3MIX3 580 aa12.07□□□□□ -0.48
HIF3A-205ENST00000377670 LBHD1Q9BQE6 289 aaPredicted RBP12.07□□□□□ -0.48
HIF3A-205ENST00000377670 FTOQ9C0B1 505 aaKnown RBP eCLIP12.07□□□□□ -0.48
HIF3A-205ENST00000377670 E7EWF7 191 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 LETM2Q2VYF4 491 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 MCF2L2Q86YR7 1114 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 RASEFQ8IZ41 740 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 CCDC155Q8N6L0 562 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 PAIP2Q9BPZ3 127 aaKnown RBP12.06□□□□□ -0.48
HIF3A-205ENST00000377670 PLVAPQ9BX97 442 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 RBSNQ9H1K0 784 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 SRP68Q9UHB9 627 aaKnown RBP12.06□□□□□ -0.48
HIF3A-205ENST00000377670 SPATA31A3Q5VYP0 1347 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 TMOD1P28289 359 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 SPATA24Q86W54 205 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 KCNG4Q8TDN1 519 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 CSRNP1Q96S65 589 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 A0A1W2PRG0 241 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 SNX16P57768 344 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 CFAP58Q5T655 872 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 HAUS3Q68CZ6 603 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 EEF2P13639 858 aaKnown RBP12.06□□□□□ -0.48
HIF3A-205ENST00000377670 GJC1P36383 396 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 CCT6AP40227 531 aaKnown RBP12.06□□□□□ -0.48
HIF3A-205ENST00000377670 CHRNDQ07001 517 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 LZTFL1Q9NQ48 299 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 KCNJ14Q9UNX9 436 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 LEMD3Q9Y2U8 911 aa12.06□□□□□ -0.48
HIF3A-205ENST00000377670 QRICH2Q9H0J4 1663 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 ZBBXA8MT70 800 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 ABL1P00519 1130 aa12.05□□□□□ -0.48
HIF3A-205ENST00000377670 TUBB4AP04350 444 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms