RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 MORN1Q5T089 497 aa23.3■■□□□ 1.32
CBWD3-204ENST00000377349 MAPK4P31152 587 aa23.29■■□□□ 1.32
CBWD3-204ENST00000377349 TMED8Q6PL24 325 aaPredicted RBP23.29■■□□□ 1.32
CBWD3-204ENST00000377349 GPR142Q7Z601 462 aa23.29■■□□□ 1.32
CBWD3-204ENST00000377349 STAP2Q9UGK3 403 aa23.29■■□□□ 1.32
CBWD3-204ENST00000377349 A0A1W2PPC1 479 aa23.28■■□□□ 1.32
CBWD3-204ENST00000377349 SHMT1P34896 483 aa23.28■■□□□ 1.32
CBWD3-204ENST00000377349 PLCD1P51178 756 aa23.28■■□□□ 1.32
CBWD3-204ENST00000377349 EVX2Q03828 476 aa23.28■■□□□ 1.32
CBWD3-204ENST00000377349 MAP3K12Q12852 859 aa23.28■■□□□ 1.32
CBWD3-204ENST00000377349 ZYXQ15942 572 aaKnown RBP23.28■■□□□ 1.32
CBWD3-204ENST00000377349 CCL14Q16627 93 aa23.28■■□□□ 1.32
CBWD3-204ENST00000377349 ACER1Q8TDN7 264 aa23.28■■□□□ 1.32
CBWD3-204ENST00000377349 GTF3C2Q8WUA4 911 aaPredicted RBP23.28■■□□□ 1.32
CBWD3-204ENST00000377349 PAGR1Q9BTK6 254 aa23.28■■□□□ 1.32
CBWD3-204ENST00000377349 A0A0G2JMZ2 1700 aa23.28■■□□□ 1.32
CBWD3-204ENST00000377349 SOX1O00570 391 aaPredicted RBP23.27■■□□□ 1.32
CBWD3-204ENST00000377349 HMMRO75330 724 aa23.27■■□□□ 1.32
CBWD3-204ENST00000377349 GUCY1A2P33402 732 aa23.27■■□□□ 1.32
CBWD3-204ENST00000377349 HSP90AB4PQ58FF6 505 aa23.27■■□□□ 1.32
CBWD3-204ENST00000377349 NBPF3Q9H094 633 aa23.27■■□□□ 1.32
CBWD3-204ENST00000377349 KIAA1683Q9H0B3 1180 aa23.27■■□□□ 1.32
CBWD3-204ENST00000377349 ZNFX1Q9P2E3 1918 aaKnown RBP23.27■■□□□ 1.32
CBWD3-204ENST00000377349 PFASO15067 1338 aa23.26■■□□□ 1.31
CBWD3-204ENST00000377349 GABPAQ06546 454 aa23.26■■□□□ 1.31
CBWD3-204ENST00000377349 CACNB2Q08289 660 aaPredicted RBP23.26■■□□□ 1.31
CBWD3-204ENST00000377349 RHPN1Q8TCX5 695 aa23.26■■□□□ 1.31
CBWD3-204ENST00000377349 GDF15Q99988 308 aa23.26■■□□□ 1.31
CBWD3-204ENST00000377349 A0A0C4DFX4 3053 aa23.26■■□□□ 1.31
CBWD3-204ENST00000377349 USP17L15C9J2P7 530 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 USP17L13C9JLJ4 530 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 USP17L11C9JVI0 530 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 USP17L18D6R9N7 530 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 USP17L22D6RA61 530 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 USP17L17D6RBQ6 530 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 USP17L19D6RCP7 530 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 USP17L20D6RJB6 530 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 ZKSCAN1P17029 563 aaPredicted RBP23.25■■□□□ 1.31
CBWD3-204ENST00000377349 VCAM1P19320 739 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 USP17L24Q0WX57 530 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 PDE3AQ14432 1141 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 RAB3GAP1Q15042 981 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 ABCB5Q2M3G0 1257 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 CERKLQ49MI3 558 aaPredicted RBP23.25■■□□□ 1.31
CBWD3-204ENST00000377349 C20orf194Q5TEA3 1177 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 CATSPERGQ6ZRH7 1159 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 PLEKHH3Q7Z736 793 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 TTC6Q86TZ1 520 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 C7orf61Q8IZ16 206 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 C11orf49Q9H6J7 331 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 RABGAP1Q9Y3P9 1069 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 ZNF236Q9UL36 1845 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 PDE6AP16499 860 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 LHX8Q68G74 356 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 LBX2Q6XYB7 198 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 TRMT44Q8IYL2 757 aaKnown RBP23.25■■□□□ 1.31
CBWD3-204ENST00000377349 FEZ1Q99689 392 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 APBA2Q99767 749 aa23.25■■□□□ 1.31
CBWD3-204ENST00000377349 TCRBV5S4A2TA0A5A2 114 aa23.24■■□□□ 1.31
CBWD3-204ENST00000377349 CCND3P30281 292 aaPredicted RBP23.24■■□□□ 1.31
CBWD3-204ENST00000377349 RGS2P41220 211 aa23.24■■□□□ 1.31
CBWD3-204ENST00000377349 RPAP2Q8IXW5 612 aaPredicted RBP23.24■■□□□ 1.31
CBWD3-204ENST00000377349 CHMP4BQ9H444 224 aaKnown RBP23.24■■□□□ 1.31
CBWD3-204ENST00000377349 ZBTB40Q9NUA8 1239 aa23.24■■□□□ 1.31
CBWD3-204ENST00000377349 ZMYND8Q9ULU4 1186 aaPredicted RBP23.24■■□□□ 1.31
CBWD3-204ENST00000377349 COL11A1P12107 1806 aaPredicted RBP23.23■■□□□ 1.31
CBWD3-204ENST00000377349 MAGEB6P1A0A0J9YX57 407 aa23.23■■□□□ 1.31
CBWD3-204ENST00000377349 COL6A1P12109 1028 aa23.23■■□□□ 1.31
CBWD3-204ENST00000377349 USP14P54578 494 aa23.23■■□□□ 1.31
CBWD3-204ENST00000377349 SIRT2Q8IXJ6 389 aa23.23■■□□□ 1.31
CBWD3-204ENST00000377349 CLASRPQ8N2M8 674 aaKnown RBP23.23■■□□□ 1.31
CBWD3-204ENST00000377349 FLRT1Q9NZU1 646 aa23.23■■□□□ 1.31
CBWD3-204ENST00000377349 BTBD7Q9P203 1132 aa23.23■■□□□ 1.31
CBWD3-204ENST00000377349 SPDYE16A6NNV3 312 aaPredicted RBP23.22■■□□□ 1.31
CBWD3-204ENST00000377349 IFIT2P09913 472 aaKnown RBP23.22■■□□□ 1.31
CBWD3-204ENST00000377349 BMP8BP34820 402 aa23.22■■□□□ 1.31
CBWD3-204ENST00000377349 MAP2K5Q13163 448 aa23.22■■□□□ 1.31
CBWD3-204ENST00000377349 SLC9C2Q5TAH2 1124 aa23.22■■□□□ 1.31
CBWD3-204ENST00000377349 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.22■■□□□ 1.31
CBWD3-204ENST00000377349 KIF1BPQ96EK5 621 aa23.22■■□□□ 1.31
CBWD3-204ENST00000377349 LRCH3Q96II8 777 aa23.22■■□□□ 1.31
CBWD3-204ENST00000377349 ZNF532Q9HCE3 1301 aa23.21■■□□□ 1.31
CBWD3-204ENST00000377349 A0A1W2PRG0 241 aa23.21■■□□□ 1.31
CBWD3-204ENST00000377349 SEPT2Q15019 361 aa23.21■■□□□ 1.31
CBWD3-204ENST00000377349 TTF1Q15361 905 aaPredicted RBP23.21■■□□□ 1.31
CBWD3-204ENST00000377349 DNAJC2Q99543 621 aaKnown RBP23.21■■□□□ 1.31
CBWD3-204ENST00000377349 SMCHD1A6NHR9 2005 aa23.2■■□□□ 1.31
CBWD3-204ENST00000377349 IGHA2P01877 340 aa23.2■■□□□ 1.3
CBWD3-204ENST00000377349 CCAR1Q8IX12 1150 aaKnown RBP23.2■■□□□ 1.3
CBWD3-204ENST00000377349 LCORLQ8N3X6 602 aa23.2■■□□□ 1.3
CBWD3-204ENST00000377349 EDC3Q96F86 508 aaKnown RBP23.2■■□□□ 1.3
CBWD3-204ENST00000377349 RPAP3Q9H6T3 665 aaPredicted RBP23.2■■□□□ 1.3
CBWD3-204ENST00000377349 GOLIM4O00461 696 aa23.19■■□□□ 1.3
CBWD3-204ENST00000377349 POLR3DP05423 398 aaPredicted RBP23.19■■□□□ 1.3
CBWD3-204ENST00000377349 SYN1P17600 705 aa23.19■■□□□ 1.3
CBWD3-204ENST00000377349 PTPREP23469 700 aa23.19■■□□□ 1.3
CBWD3-204ENST00000377349 SDR42E1Q8WUS8 393 aa23.19■■□□□ 1.3
CBWD3-204ENST00000377349 CRNKL1Q9BZJ0 848 aaKnown RBP23.19■■□□□ 1.3
CBWD3-204ENST00000377349 CABP5Q9NP86 173 aa23.19■■□□□ 1.3
CBWD3-204ENST00000377349 DCP1AQ9NPI6 582 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms