RNA–Protein interactions for RNA: ENST00000376800.7

HCG9-201, Transcript of HLA complex group 9, humanhuman

TSL 1 (best) BASIC

Gene HCG9, Length 663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG9-201ENST00000376800 COA7Q96BR5 231 aa16.35■□□□□ 0.21
HCG9-201ENST00000376800 DCTPP1Q9H773 170 aa16.35■□□□□ 0.21
HCG9-201ENST00000376800 RBPJLQ9UBG7 517 aa16.35■□□□□ 0.21
HCG9-201ENST00000376800 MORF4L1Q9UBU8 362 aa16.35■□□□□ 0.21
HCG9-201ENST00000376800 ALPK3Q96L96 1907 aa16.35■□□□□ 0.21
HCG9-201ENST00000376800 PARP14Q460N5 1801 aa16.34■□□□□ 0.21
HCG9-201ENST00000376800 A0A1W2PRG0 241 aa16.34■□□□□ 0.21
HCG9-201ENST00000376800 CNMDO75829 334 aa16.34■□□□□ 0.21
HCG9-201ENST00000376800 VCAM1P19320 739 aa16.34■□□□□ 0.21
HCG9-201ENST00000376800 UBXN2AP68543 259 aa16.34■□□□□ 0.21
HCG9-201ENST00000376800 TMED8Q6PL24 325 aaPredicted RBP16.34■□□□□ 0.21
HCG9-201ENST00000376800 PORCNQ9H237 461 aa16.34■□□□□ 0.21
HCG9-201ENST00000376800 GINM1Q9NU53 330 aa16.34■□□□□ 0.21
HCG9-201ENST00000376800 A0A0G2JMZ2 1700 aa16.33■□□□□ 0.21
HCG9-201ENST00000376800 AKR1B1P15121 316 aa16.33■□□□□ 0.2
HCG9-201ENST00000376800 IRF5Q13568 498 aa16.33■□□□□ 0.2
HCG9-201ENST00000376800 KIAA1755Q5JYT7 1200 aa16.33■□□□□ 0.2
HCG9-201ENST00000376800 CRBNQ96SW2 442 aa16.33■□□□□ 0.2
HCG9-201ENST00000376800 ECHDC1Q9NTX5 307 aa16.33■□□□□ 0.2
HCG9-201ENST00000376800 GJD2Q9UKL4 321 aa16.33■□□□□ 0.2
HCG9-201ENST00000376800 GJB1P08034 283 aa16.32■□□□□ 0.2
HCG9-201ENST00000376800 CYP2B6P20813 491 aa16.32■□□□□ 0.2
HCG9-201ENST00000376800 GJA8P48165 433 aa16.32■□□□□ 0.2
HCG9-201ENST00000376800 ERVK-9P63128 1117 aa16.32■□□□□ 0.2
HCG9-201ENST00000376800 ERVK-24P63145 666 aa16.32■□□□□ 0.2
HCG9-201ENST00000376800 STK11IPQ8N1F8 1099 aa16.32■□□□□ 0.2
HCG9-201ENST00000376800 U2AF1L4Q8WU68 220 aaKnown RBP16.32■□□□□ 0.2
HCG9-201ENST00000376800 TRIB2Q92519 343 aa16.32■□□□□ 0.2
HCG9-201ENST00000376800 C12orf42Q96LP6 360 aa16.32■□□□□ 0.2
HCG9-201ENST00000376800 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.32■□□□□ 0.2
HCG9-201ENST00000376800 CABP5Q9NP86 173 aa16.32■□□□□ 0.2
HCG9-201ENST00000376800 SLC4A4Q9Y6R1 1079 aa16.32■□□□□ 0.2
HCG9-201ENST00000376800 GREB1LQ9C091 1923 aaPredicted RBP16.31■□□□□ 0.2
HCG9-201ENST00000376800 COL11A1P12107 1806 aaPredicted RBP16.31■□□□□ 0.2
HCG9-201ENST00000376800 USP17L12C9JPN9 530 aa16.31■□□□□ 0.2
HCG9-201ENST00000376800 USP17L21D6R901 530 aa16.31■□□□□ 0.2
HCG9-201ENST00000376800 SLC34A2O95436 690 aa16.31■□□□□ 0.2
HCG9-201ENST00000376800 UBE3CQ15386 1083 aa16.31■□□□□ 0.2
HCG9-201ENST00000376800 GPRC5AQ8NFJ5 357 aa16.31■□□□□ 0.2
HCG9-201ENST00000376800 PXYLP1Q8TE99 480 aa16.31■□□□□ 0.2
HCG9-201ENST00000376800 DEFB118Q96PH6 123 aa16.31■□□□□ 0.2
HCG9-201ENST00000376800 KIAA1683Q9H0B3 1180 aa16.31■□□□□ 0.2
HCG9-201ENST00000376800 RPAP3Q9H6T3 665 aaPredicted RBP16.31■□□□□ 0.2
HCG9-201ENST00000376800 FRMPD3Q5JV73 1810 aa16.31■□□□□ 0.2
HCG9-201ENST00000376800 USP17L15C9J2P7 530 aa16.3■□□□□ 0.2
HCG9-201ENST00000376800 USP17L13C9JLJ4 530 aa16.3■□□□□ 0.2
HCG9-201ENST00000376800 USP17L11C9JVI0 530 aa16.3■□□□□ 0.2
HCG9-201ENST00000376800 USP17L18D6R9N7 530 aa16.3■□□□□ 0.2
HCG9-201ENST00000376800 USP17L22D6RA61 530 aa16.3■□□□□ 0.2
HCG9-201ENST00000376800 USP17L17D6RBQ6 530 aa16.3■□□□□ 0.2
HCG9-201ENST00000376800 USP17L19D6RCP7 530 aa16.3■□□□□ 0.2
HCG9-201ENST00000376800 USP17L20D6RJB6 530 aa16.3■□□□□ 0.2
HCG9-201ENST00000376800 USP17L24Q0WX57 530 aa16.3■□□□□ 0.2
HCG9-201ENST00000376800 CATSPERGQ6ZRH7 1159 aa16.3■□□□□ 0.2
HCG9-201ENST00000376800 UBE2Q1Q7Z7E8 422 aa16.3■□□□□ 0.2
HCG9-201ENST00000376800 OSBP2Q969R2 916 aa16.3■□□□□ 0.2
HCG9-201ENST00000376800 BTBD7Q9P203 1132 aa16.3■□□□□ 0.2
HCG9-201ENST00000376800 RANBP2P49792 3224 aaKnown RBP16.3■□□□□ 0.2
HCG9-201ENST00000376800 SPDYE16A6NNV3 312 aaPredicted RBP16.29■□□□□ 0.2
HCG9-201ENST00000376800 M0R2C6 588 aa16.29■□□□□ 0.2
HCG9-201ENST00000376800 CDK8P49336 464 aa16.29■□□□□ 0.2
HCG9-201ENST00000376800 CCL14Q16627 93 aa16.29■□□□□ 0.2
HCG9-201ENST00000376800 C12orf60Q5U649 245 aa16.29■□□□□ 0.2
HCG9-201ENST00000376800 CTR9Q6PD62 1173 aa16.29■□□□□ 0.2
HCG9-201ENST00000376800 GPR142Q7Z601 462 aa16.29■□□□□ 0.2
HCG9-201ENST00000376800 SIAH1Q8IUQ4 282 aa16.29■□□□□ 0.2
HCG9-201ENST00000376800 KBTBD3Q8NAB2 608 aa16.29■□□□□ 0.2
HCG9-201ENST00000376800 DIS3LQ8TF46 1054 aaKnown RBP16.29■□□□□ 0.2
HCG9-201ENST00000376800 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.29■□□□□ 0.2
HCG9-201ENST00000376800 ATP8A2Q9NTI2 1148 aa16.29■□□□□ 0.2
HCG9-201ENST00000376800 FARP2O94887 1054 aaPredicted RBP16.28■□□□□ 0.2
HCG9-201ENST00000376800 SGPL1O95470 568 aa16.28■□□□□ 0.2
HCG9-201ENST00000376800 HMGCRP04035 888 aa16.28■□□□□ 0.2
HCG9-201ENST00000376800 USP14P54578 494 aa16.28■□□□□ 0.2
HCG9-201ENST00000376800 SPICE1Q8N0Z3 855 aa16.28■□□□□ 0.2
HCG9-201ENST00000376800 PI4K2BQ8TCG2 481 aa16.28■□□□□ 0.2
HCG9-201ENST00000376800 STRBPQ96SI9 672 aaKnown RBP16.28■□□□□ 0.2
HCG9-201ENST00000376800 SEC62Q99442 399 aaKnown RBP16.28■□□□□ 0.2
HCG9-201ENST00000376800 EPB41L4AQ9HCS5 686 aaPredicted RBP16.28■□□□□ 0.2
HCG9-201ENST00000376800 PAK6Q9NQU5 681 aaPredicted RBP16.28■□□□□ 0.2
HCG9-201ENST00000376800 PCDH10Q9P2E7 1040 aa16.28■□□□□ 0.2
HCG9-201ENST00000376800 GSG1L2A8MUP6 293 aa16.27■□□□□ 0.2
HCG9-201ENST00000376800 H0YGN5 161 aa16.27■□□□□ 0.2
HCG9-201ENST00000376800 ICA1Q05084 483 aa16.27■□□□□ 0.2
HCG9-201ENST00000376800 WDR78Q5VTH9 848 aa16.27■□□□□ 0.2
HCG9-201ENST00000376800 ZSCAN25Q6NSZ9 544 aa16.27■□□□□ 0.2
HCG9-201ENST00000376800 SAMD1Q6SPF0 538 aaPredicted RBP16.27■□□□□ 0.2
HCG9-201ENST00000376800 TMEM179Q6ZVK1 233 aa16.27■□□□□ 0.2
HCG9-201ENST00000376800 C16orf86Q6ZW13 317 aa16.27■□□□□ 0.2
HCG9-201ENST00000376800 NKX2-3Q8TAU0 364 aa16.27■□□□□ 0.2
HCG9-201ENST00000376800 TANGO6Q9C0B7 1094 aa16.27■□□□□ 0.2
HCG9-201ENST00000376800 SWAP70Q9UH65 585 aa16.27■□□□□ 0.2
HCG9-201ENST00000376800 MYH4Q9Y623 1939 aa16.27■□□□□ 0.19
HCG9-201ENST00000376800 RNF113AO15541 343 aaKnown RBP16.26■□□□□ 0.19
HCG9-201ENST00000376800 TFRCP02786 760 aaKnown RBP16.26■□□□□ 0.19
HCG9-201ENST00000376800 ATP2B2Q01814 1243 aa16.26■□□□□ 0.19
HCG9-201ENST00000376800 MORN1Q5T089 497 aa16.26■□□□□ 0.19
HCG9-201ENST00000376800 PLEKHH3Q7Z736 793 aa16.26■□□□□ 0.19
HCG9-201ENST00000376800 USP6NLQ92738 828 aa16.26■□□□□ 0.19
HCG9-201ENST00000376800 GPATCH3Q96I76 525 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms