RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 PSDA5PKW4 1024 aaPredicted RBP11.04□□□□□ -0.64
TRIM39-202ENST00000376659 NMT2O60551 498 aa11.04□□□□□ -0.64
TRIM39-202ENST00000376659 SKILP12757 684 aa11.04□□□□□ -0.64
TRIM39-202ENST00000376659 GSDMDP57764 484 aa11.04□□□□□ -0.64
TRIM39-202ENST00000376659 PLCB2Q00722 1185 aa11.04□□□□□ -0.64
TRIM39-202ENST00000376659 DPYDQ12882 1025 aa11.04□□□□□ -0.64
TRIM39-202ENST00000376659 LRRC15Q8TF66 581 aa11.04□□□□□ -0.64
TRIM39-202ENST00000376659 CSRNP2Q9H175 543 aa11.04□□□□□ -0.64
TRIM39-202ENST00000376659 IQSEC3Q9UPP2 1182 aaPredicted RBP11.04□□□□□ -0.64
TRIM39-202ENST00000376659 SLX4Q8IY92 1834 aa11.03□□□□□ -0.64
TRIM39-202ENST00000376659 GOLGA6L19H0YKK7 550 aa11.03□□□□□ -0.64
TRIM39-202ENST00000376659 BIN1O00499 593 aa11.03□□□□□ -0.64
TRIM39-202ENST00000376659 CD44P16070 742 aaKnown RBP11.03□□□□□ -0.64
TRIM39-202ENST00000376659 PRDX5P30044 214 aa11.03□□□□□ -0.64
TRIM39-202ENST00000376659 CDKAL1Q5VV42 579 aa11.03□□□□□ -0.64
TRIM39-202ENST00000376659 PDXDC2PQ6P474 469 aa11.03□□□□□ -0.64
TRIM39-202ENST00000376659 SYNE3Q6ZMZ3 975 aa11.03□□□□□ -0.64
TRIM39-202ENST00000376659 NACAP1Q9BZK3 213 aa11.03□□□□□ -0.64
TRIM39-202ENST00000376659 CYP2D6P10635 497 aa11.03□□□□□ -0.64
TRIM39-202ENST00000376659 ATP2C1P98194 919 aaPredicted RBP11.03□□□□□ -0.64
TRIM39-202ENST00000376659 MYL5Q02045 173 aa11.03□□□□□ -0.64
TRIM39-202ENST00000376659 POSTNQ15063 836 aa11.03□□□□□ -0.64
TRIM39-202ENST00000376659 REXO1L1PQ8IX06 675 aa11.03□□□□□ -0.64
TRIM39-202ENST00000376659 XDHP47989 1333 aa11.03□□□□□ -0.64
TRIM39-202ENST00000376659 FAM205AQ6ZU69 1335 aa11.03□□□□□ -0.64
TRIM39-202ENST00000376659 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.02□□□□□ -0.64
TRIM39-202ENST00000376659 IGSF3O75054 1194 aa11.02□□□□□ -0.64
TRIM39-202ENST00000376659 CRY2Q49AN0 593 aa11.02□□□□□ -0.64
TRIM39-202ENST00000376659 GRAMD1CQ8IYS0 662 aa11.02□□□□□ -0.64
TRIM39-202ENST00000376659 PLCD3Q8N3E9 789 aa11.02□□□□□ -0.64
TRIM39-202ENST00000376659 CCDC94Q9BW85 323 aaPredicted RBP11.02□□□□□ -0.64
TRIM39-202ENST00000376659 PLIN4Q96Q06 1357 aa11.02□□□□□ -0.65
TRIM39-202ENST00000376659 SPECC1Q5M775 1068 aa11.02□□□□□ -0.65
TRIM39-202ENST00000376659 MTERF4Q7Z6M4 381 aaKnown RBP11.02□□□□□ -0.65
TRIM39-202ENST00000376659 CCDC150Q8NCX0 1101 aa11.02□□□□□ -0.65
TRIM39-202ENST00000376659 LRRN4CLQ8ND94 238 aa11.02□□□□□ -0.65
TRIM39-202ENST00000376659 CERKQ8TCT0 537 aa11.02□□□□□ -0.65
TRIM39-202ENST00000376659 ESR2Q92731 530 aa11.02□□□□□ -0.65
TRIM39-202ENST00000376659 SERTAD1Q9UHV2 236 aa11.02□□□□□ -0.65
TRIM39-202ENST00000376659 SCN9AQ15858 1988 aa11.02□□□□□ -0.65
TRIM39-202ENST00000376659 NFXL1Q6ZNB6 911 aa11.02□□□□□ -0.65
TRIM39-202ENST00000376659 JMYQ8N9B5 988 aa11.02□□□□□ -0.65
TRIM39-202ENST00000376659 TRIML1Q8N9V2 468 aa11.02□□□□□ -0.65
TRIM39-202ENST00000376659 SDF4Q9BRK5 362 aa11.02□□□□□ -0.65
TRIM39-202ENST00000376659 RBM28Q9NW13 759 aaKnown RBP11.02□□□□□ -0.65
TRIM39-202ENST00000376659 FAM13BQ9NYF5 915 aa11.02□□□□□ -0.65
TRIM39-202ENST00000376659 LRP2BPQ9P2M1 347 aa11.02□□□□□ -0.65
TRIM39-202ENST00000376659 PAXBP1Q9Y5B6 917 aa11.02□□□□□ -0.65
TRIM39-202ENST00000376659 ONECUT3O60422 494 aaPredicted RBP11.01□□□□□ -0.65
TRIM39-202ENST00000376659 PRDM1O75626 825 aa11.01□□□□□ -0.65
TRIM39-202ENST00000376659 TNNT1P13805 278 aa11.01□□□□□ -0.65
TRIM39-202ENST00000376659 NAA30Q147X3 362 aaPredicted RBP11.01□□□□□ -0.65
TRIM39-202ENST00000376659 FAM98CQ17RN3 349 aaKnown RBP11.01□□□□□ -0.65
TRIM39-202ENST00000376659 TYW1BQ6NUM6 668 aa11.01□□□□□ -0.65
TRIM39-202ENST00000376659 FANCLQ9NW38 375 aa11.01□□□□□ -0.65
TRIM39-202ENST00000376659 VPS54Q9P1Q0 977 aa11.01□□□□□ -0.65
TRIM39-202ENST00000376659 PFKFB3Q16875 520 aaPredicted RBP11.01□□□□□ -0.65
TRIM39-202ENST00000376659 TC2NQ8N9U0 490 aa11.01□□□□□ -0.65
TRIM39-202ENST00000376659 ENOX1Q8TC92 643 aaKnown RBP11.01□□□□□ -0.65
TRIM39-202ENST00000376659 IPO4Q8TEX9 1081 aaKnown RBP11.01□□□□□ -0.65
TRIM39-202ENST00000376659 TCP11L1Q9NUJ3 509 aa11.01□□□□□ -0.65
TRIM39-202ENST00000376659 MAD2L2Q9UI95 211 aa11.01□□□□□ -0.65
TRIM39-202ENST00000376659 A0A1B0GTH6 734 aa11.01□□□□□ -0.65
TRIM39-202ENST00000376659 PPP1R3GB7ZBB8 358 aa11.01□□□□□ -0.65
TRIM39-202ENST00000376659 NR1I3Q14994 352 aa11.01□□□□□ -0.65
TRIM39-202ENST00000376659 CEP135Q66GS9 1140 aa11.01□□□□□ -0.65
TRIM39-202ENST00000376659 ATP8A2Q9NTI2 1148 aa11.01□□□□□ -0.65
TRIM39-202ENST00000376659 RTFDC1Q9BY42 306 aaPredicted RBP11□□□□□ -0.65
TRIM39-202ENST00000376659 ARPP21Q9UBL0 812 aaPredicted RBP11□□□□□ -0.65
TRIM39-202ENST00000376659 CCDC196A0A1B0GTZ2 297 aa11□□□□□ -0.65
TRIM39-202ENST00000376659 POLR2DO15514 142 aaKnown RBP11□□□□□ -0.65
TRIM39-202ENST00000376659 C12orf60Q5U649 245 aa11□□□□□ -0.65
TRIM39-202ENST00000376659 DAGLBQ8NCG7 672 aa11□□□□□ -0.65
TRIM39-202ENST00000376659 ARHGEF1Q92888 912 aaKnown RBP11□□□□□ -0.65
TRIM39-202ENST00000376659 EPSTI1Q96J88 318 aa11□□□□□ -0.65
TRIM39-202ENST00000376659 VWA3AA6NCI4 1184 aa11□□□□□ -0.65
TRIM39-202ENST00000376659 EDIL3O43854 480 aa11□□□□□ -0.65
TRIM39-202ENST00000376659 LMOD1P29536 600 aaPredicted RBP11□□□□□ -0.65
TRIM39-202ENST00000376659 PLCD1P51178 756 aa11□□□□□ -0.65
TRIM39-202ENST00000376659 RPS8P62241 208 aaKnown RBP11□□□□□ -0.65
TRIM39-202ENST00000376659 CT47A1Q5JQC4 288 aaPredicted RBP11□□□□□ -0.65
TRIM39-202ENST00000376659 CPLX2Q6PUV4 134 aaKnown RBP11□□□□□ -0.65
TRIM39-202ENST00000376659 TMC6Q7Z403 805 aa11□□□□□ -0.65
TRIM39-202ENST00000376659 PAGE5Q96GU1 130 aa11□□□□□ -0.65
TRIM39-202ENST00000376659 NYXQ9GZU5 481 aa11□□□□□ -0.65
TRIM39-202ENST00000376659 ZHX1Q9UKY1 873 aaPredicted RBP11□□□□□ -0.65
TRIM39-202ENST00000376659 USP17L12C9JPN9 530 aa10.99□□□□□ -0.65
TRIM39-202ENST00000376659 USP17L21D6R901 530 aa10.99□□□□□ -0.65
TRIM39-202ENST00000376659 CYTH3O43739 400 aa10.99□□□□□ -0.65
TRIM39-202ENST00000376659 KRT2P35908 639 aa10.99□□□□□ -0.65
TRIM39-202ENST00000376659 NT5C2P49902 561 aa10.99□□□□□ -0.65
TRIM39-202ENST00000376659 PPP4CP60510 307 aa10.99□□□□□ -0.65
TRIM39-202ENST00000376659 ISM2Q6H9L7 571 aa10.99□□□□□ -0.65
TRIM39-202ENST00000376659 LRRC4BQ9NT99 713 aa10.99□□□□□ -0.65
TRIM39-202ENST00000376659 FLT1P17948 1338 aa10.99□□□□□ -0.65
TRIM39-202ENST00000376659 KLRG2A4D1S0 409 aaPredicted RBP10.99□□□□□ -0.65
TRIM39-202ENST00000376659 BECN2A8MW95 431 aa10.99□□□□□ -0.65
TRIM39-202ENST00000376659 SART3Q15020 963 aaKnown RBP10.99□□□□□ -0.65
TRIM39-202ENST00000376659 FCHSD1Q86WN1 690 aa10.99□□□□□ -0.65
TRIM39-202ENST00000376659 FBXW7Q969H0 707 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms