RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 RTEL1Q9NZ71 1219 aa20.49■□□□□ 0.87
CTTN-203ENST00000376561 XRCC6P12956 609 aaKnown RBP eCLIP20.48■□□□□ 0.875e-6■■■■■ 27.9
CTTN-203ENST00000376561 U2AF2P26368 475 aaKnown RBP eCLIP20.48■□□□□ 0.879e-12■□□□□ 10.9
CTTN-203ENST00000376561 MAP3K14Q99558 947 aa20.48■□□□□ 0.87
CTTN-203ENST00000376561 ZNF277Q9NRM2 450 aaPredicted RBP20.48■□□□□ 0.87
CTTN-203ENST00000376561 STX8Q9UNK0 236 aa20.48■□□□□ 0.87
CTTN-203ENST00000376561 MMP1P03956 469 aa20.47■□□□□ 0.87
CTTN-203ENST00000376561 GNL2Q13823 731 aaKnown RBP20.47■□□□□ 0.87
CTTN-203ENST00000376561 PKN1Q16512 942 aa20.47■□□□□ 0.87
CTTN-203ENST00000376561 SOGA3Q5TF21 947 aa20.47■□□□□ 0.87
CTTN-203ENST00000376561 LARGE2Q8N3Y3 721 aa20.47■□□□□ 0.87
CTTN-203ENST00000376561 SRBD1Q8N5C6 995 aaKnown RBP20.47■□□□□ 0.87
CTTN-203ENST00000376561 LIG1P18858 919 aa20.47■□□□□ 0.87
CTTN-203ENST00000376561 KIF5BP33176 963 aa20.47■□□□□ 0.87
CTTN-203ENST00000376561 POLR3EQ9NVU0 708 aa20.47■□□□□ 0.87
CTTN-203ENST00000376561 SERPINB13Q9UIV8 391 aa20.47■□□□□ 0.87
CTTN-203ENST00000376561 V9GY48 417 aaPredicted RBP20.47■□□□□ 0.87
CTTN-203ENST00000376561 CNTNAP5Q8WYK1 1306 aa20.47■□□□□ 0.87
CTTN-203ENST00000376561 MYH8P13535 1937 aa20.46■□□□□ 0.87
CTTN-203ENST00000376561 R3HDM1Q15032 1099 aaKnown RBP20.46■□□□□ 0.87
CTTN-203ENST00000376561 TMEM47Q9BQJ4 181 aa20.46■□□□□ 0.87
CTTN-203ENST00000376561 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.46■□□□□ 0.87
CTTN-203ENST00000376561 VPS33BQ9H267 617 aa20.46■□□□□ 0.87
CTTN-203ENST00000376561 KCNJ14Q9UNX9 436 aa20.46■□□□□ 0.87
CTTN-203ENST00000376561 COL4A5P29400 1685 aa20.46■□□□□ 0.87
CTTN-203ENST00000376561 CLIC4Q9Y696 253 aa20.46■□□□□ 0.87
CTTN-203ENST00000376561 SAFBQ15424 915 aaKnown RBP eCLIP20.45■□□□□ 0.86
CTTN-203ENST00000376561 LINC00301Q8NCQ3 95 aa20.45■□□□□ 0.86
CTTN-203ENST00000376561 BICD2Q8TD16 824 aa20.45■□□□□ 0.86
CTTN-203ENST00000376561 IDI2Q9BXS1 227 aa20.45■□□□□ 0.86
CTTN-203ENST00000376561 SWAP70Q9UH65 585 aa20.45■□□□□ 0.86
CTTN-203ENST00000376561 PLIN4Q96Q06 1357 aa20.45■□□□□ 0.86
CTTN-203ENST00000376561 hCG_1642624A0A1W2PR95 340 aa20.45■□□□□ 0.86
CTTN-203ENST00000376561 LETM1O95202 739 aaPredicted RBP20.45■□□□□ 0.86
CTTN-203ENST00000376561 YEATS4O95619 227 aa20.45■□□□□ 0.86
CTTN-203ENST00000376561 HLA-DOAP06340 250 aa20.45■□□□□ 0.86
CTTN-203ENST00000376561 NASPP49321 788 aaPredicted RBP20.45■□□□□ 0.86
CTTN-203ENST00000376561 CACNB3P54284 484 aa20.45■□□□□ 0.86
CTTN-203ENST00000376561 DIS3L2Q8IYB7 885 aaKnown RBP20.45■□□□□ 0.86
CTTN-203ENST00000376561 CEP95Q96GE4 821 aa20.45■□□□□ 0.86
CTTN-203ENST00000376561 BRCA1P38398 1863 aaKnown RBP20.45■□□□□ 0.86
CTTN-203ENST00000376561 MYO3BQ8WXR4 1341 aa20.44■□□□□ 0.86
CTTN-203ENST00000376561 BTBD18B2RXH4 712 aa20.44■□□□□ 0.86
CTTN-203ENST00000376561 XBP1P17861 261 aa20.44■□□□□ 0.86
CTTN-203ENST00000376561 GRM4Q14833 912 aa20.44■□□□□ 0.86
CTTN-203ENST00000376561 RSBN1LQ6PCB5 846 aaPredicted RBP20.44■□□□□ 0.86
CTTN-203ENST00000376561 ZFPM1Q8IX07 1006 aa20.44■□□□□ 0.86
CTTN-203ENST00000376561 RAD17O75943 681 aa20.43■□□□□ 0.86
CTTN-203ENST00000376561 NOVP48745 357 aa20.43■□□□□ 0.86
CTTN-203ENST00000376561 CFAP100Q494V2 611 aa20.43■□□□□ 0.86
CTTN-203ENST00000376561 DALRD3Q5D0E6 543 aaKnown RBP20.43■□□□□ 0.86
CTTN-203ENST00000376561 ANO1Q5XXA6 986 aa20.43■□□□□ 0.86
CTTN-203ENST00000376561 NOSTRINQ8IVI9 506 aa20.43■□□□□ 0.86
CTTN-203ENST00000376561 SHISA4Q96DD7 197 aa20.43■□□□□ 0.86
CTTN-203ENST00000376561 FOXP1Q9H334 677 aaPredicted RBP20.43■□□□□ 0.86
CTTN-203ENST00000376561 FAM198AQ9UFP1 575 aa20.43■□□□□ 0.86
CTTN-203ENST00000376561 VIL1P09327 827 aaKnown RBP20.43■□□□□ 0.86
CTTN-203ENST00000376561 ME1P48163 572 aa20.43■□□□□ 0.86
CTTN-203ENST00000376561 STK38Q15208 465 aa20.43■□□□□ 0.86
CTTN-203ENST00000376561 STAG2Q8N3U4 1231 aa20.43■□□□□ 0.86
CTTN-203ENST00000376561 KCNG4Q8TDN1 519 aa20.43■□□□□ 0.86
CTTN-203ENST00000376561 EHD4Q9H223 541 aa20.43■□□□□ 0.86
CTTN-203ENST00000376561 DACT1Q9NYF0 836 aa20.43■□□□□ 0.86
CTTN-203ENST00000376561 VPS54Q9P1Q0 977 aa20.43■□□□□ 0.86
CTTN-203ENST00000376561 MAD2L2Q9UI95 211 aa20.43■□□□□ 0.86
CTTN-203ENST00000376561 BAZ2BQ9UIF8 2168 aaKnown RBP20.43■□□□□ 0.86
CTTN-203ENST00000376561 PSMD14O00487 310 aa20.42■□□□□ 0.86
CTTN-203ENST00000376561 NPM3O75607 178 aaKnown RBP20.42■□□□□ 0.86
CTTN-203ENST00000376561 TCP10Q12799 353 aa20.42■□□□□ 0.86
CTTN-203ENST00000376561 DHX36Q9H2U1 1008 aaKnown RBP20.42■□□□□ 0.86
CTTN-203ENST00000376561 TOP1P11387 765 aaKnown RBP20.42■□□□□ 0.86
CTTN-203ENST00000376561 AKR1B1P15121 316 aa20.42■□□□□ 0.86
CTTN-203ENST00000376561 SHMT1P34896 483 aa20.42■□□□□ 0.86
CTTN-203ENST00000376561 GNAQP50148 359 aa20.42■□□□□ 0.86
CTTN-203ENST00000376561 TDRD3Q9H7E2 651 aaKnown RBP20.42■□□□□ 0.86
CTTN-203ENST00000376561 PPP1R1BQ9UD71 204 aaPredicted RBP20.42■□□□□ 0.86
CTTN-203ENST00000376561 SIPA1L1O43166 1804 aa20.41■□□□□ 0.86
CTTN-203ENST00000376561 PRMT6Q96LA8 375 aaPredicted RBP20.41■□□□□ 0.86
CTTN-203ENST00000376561 GMLQ99445 158 aa20.41■□□□□ 0.86
CTTN-203ENST00000376561 SGIP1Q9BQI5 828 aa20.41■□□□□ 0.86
CTTN-203ENST00000376561 PHF20Q9BVI0 1012 aa20.41■□□□□ 0.86
CTTN-203ENST00000376561 ZNRF3Q9ULT6 936 aa20.41■□□□□ 0.86
CTTN-203ENST00000376561 PCDHA7Q9UN72 937 aa20.41■□□□□ 0.86
CTTN-203ENST00000376561 FER1L6Q2WGJ9 1857 aa20.41■□□□□ 0.86
CTTN-203ENST00000376561 SPTLC2O15270 562 aa20.41■□□□□ 0.86
CTTN-203ENST00000376561 NR1I2O75469 434 aa20.41■□□□□ 0.86
CTTN-203ENST00000376561 SF3A1Q15459 793 aaKnown RBP20.41■□□□□ 0.86
CTTN-203ENST00000376561 NIM1KQ8IY84 436 aa20.41■□□□□ 0.86
CTTN-203ENST00000376561 PANK2Q9BZ23 570 aa20.41■□□□□ 0.86
CTTN-203ENST00000376561 RBSNQ9H1K0 784 aa20.41■□□□□ 0.86
CTTN-203ENST00000376561 DDX19AQ9NUU7 478 aaKnown RBP20.41■□□□□ 0.86
CTTN-203ENST00000376561 MTMR4Q9NYA4 1195 aa20.41■□□□□ 0.86
CTTN-203ENST00000376561 MTMR7Q9Y216 660 aa20.41■□□□□ 0.86
CTTN-203ENST00000376561 IGKV6D-41A0A0C4DH26 115 aa20.4■□□□□ 0.86
CTTN-203ENST00000376561 PALM3A6NDB9 673 aaPredicted RBP20.4■□□□□ 0.86
CTTN-203ENST00000376561 DDTLA6NHG4 134 aaPredicted RBP20.4■□□□□ 0.86
CTTN-203ENST00000376561 CCAR1Q8IX12 1150 aaKnown RBP20.4■□□□□ 0.86
CTTN-203ENST00000376561 NUP62CLQ9H1M0 184 aa20.4■□□□□ 0.86
CTTN-203ENST00000376561 SCG2P13521 617 aa20.39■□□□□ 0.86
CTTN-203ENST00000376561 NR5A1Q13285 461 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms