RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 LMOD1P29536 600 aaPredicted RBP12.26□□□□□ -0.45
PDPN-203ENST00000376061 TNNI2P48788 182 aa12.26□□□□□ -0.45
PDPN-203ENST00000376061 TNFAIP1Q13829 316 aa12.26□□□□□ -0.45
PDPN-203ENST00000376061 RASA3Q14644 834 aa12.26□□□□□ -0.45
PDPN-203ENST00000376061 IFIT1BQ5T764 474 aaKnown RBP12.26□□□□□ -0.45
PDPN-203ENST00000376061 RCSD1Q6JBY9 416 aa12.26□□□□□ -0.45
PDPN-203ENST00000376061 MICU3Q86XE3 530 aa12.26□□□□□ -0.45
PDPN-203ENST00000376061 RAB11FIP4Q86YS3 637 aa12.26□□□□□ -0.45
PDPN-203ENST00000376061 ZNF654Q8IZM8 581 aa12.26□□□□□ -0.45
PDPN-203ENST00000376061 MYL10Q9BUA6 226 aa12.26□□□□□ -0.45
PDPN-203ENST00000376061 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.26□□□□□ -0.45
PDPN-203ENST00000376061 NCOA5Q9HCD5 579 aaKnown RBP12.26□□□□□ -0.45
PDPN-203ENST00000376061 TCP11L1Q9NUJ3 509 aa12.26□□□□□ -0.45
PDPN-203ENST00000376061 MYH6P13533 1939 aa12.25□□□□□ -0.45
PDPN-203ENST00000376061 ZBTB43O43298 467 aa12.25□□□□□ -0.45
PDPN-203ENST00000376061 HIRAP54198 1017 aaPredicted RBP12.25□□□□□ -0.45
PDPN-203ENST00000376061 CCT2P78371 535 aaKnown RBP12.25□□□□□ -0.45
PDPN-203ENST00000376061 TATDN1Q6P1N9 297 aa12.25□□□□□ -0.45
PDPN-203ENST00000376061 APOBEC3FQ8IUX4 373 aaKnown RBP12.25□□□□□ -0.45
PDPN-203ENST00000376061 FOXP4Q8IVH2 680 aaPredicted RBP12.25□□□□□ -0.45
PDPN-203ENST00000376061 TMTC2Q8N394 836 aa12.25□□□□□ -0.45
PDPN-203ENST00000376061 TEPSINQ96N21 525 aa12.25□□□□□ -0.45
PDPN-203ENST00000376061 TRIM34Q9BYJ4 488 aa12.25□□□□□ -0.45
PDPN-203ENST00000376061 CWC22Q9HCG8 908 aaKnown RBP12.25□□□□□ -0.45
PDPN-203ENST00000376061 ADARB2Q9NS39 739 aaKnown RBP12.25□□□□□ -0.45
PDPN-203ENST00000376061 GGA3Q9NZ52 723 aa12.25□□□□□ -0.45
PDPN-203ENST00000376061 HERC5Q9UII4 1024 aaKnown RBP12.25□□□□□ -0.45
PDPN-203ENST00000376061 SCAF8Q9UPN6 1271 aaKnown RBP12.25□□□□□ -0.45
PDPN-203ENST00000376061 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.25□□□□□ -0.45
PDPN-203ENST00000376061 SLC12A7Q9Y666 1083 aa12.25□□□□□ -0.45
PDPN-203ENST00000376061 DOCK1Q14185 1865 aa12.25□□□□□ -0.45
PDPN-203ENST00000376061 IGKV6D-41A0A0C4DH26 115 aa12.24□□□□□ -0.45
PDPN-203ENST00000376061 GOLGA8AA7E2F4 631 aa12.24□□□□□ -0.45
PDPN-203ENST00000376061 DTNBO60941 627 aa12.24□□□□□ -0.45
PDPN-203ENST00000376061 CTDNEP1O95476 244 aa12.24□□□□□ -0.45
PDPN-203ENST00000376061 RXRAP19793 462 aa12.24□□□□□ -0.45
PDPN-203ENST00000376061 METAP2P50579 478 aaKnown RBP eCLIP12.24□□□□□ -0.45
PDPN-203ENST00000376061 RCAN1P53805 252 aa12.24□□□□□ -0.45
PDPN-203ENST00000376061 CCDC178Q5BJE1 867 aa12.24□□□□□ -0.45
PDPN-203ENST00000376061 ANGEL2Q5VTE6 544 aaKnown RBP12.24□□□□□ -0.45
PDPN-203ENST00000376061 DPY19L2Q6NUT2 758 aa12.24□□□□□ -0.45
PDPN-203ENST00000376061 NSUN7Q8NE18 718 aaKnown RBP12.24□□□□□ -0.45
PDPN-203ENST00000376061 ANKS1AQ92625 1134 aa12.24□□□□□ -0.45
PDPN-203ENST00000376061 CEP95Q96GE4 821 aa12.24□□□□□ -0.45
PDPN-203ENST00000376061 CIZ1Q9ULV3 898 aaPredicted RBP12.24□□□□□ -0.45
PDPN-203ENST00000376061 SMC3Q9UQE7 1217 aa12.24□□□□□ -0.45
PDPN-203ENST00000376061 PAPPA2Q9BXP8 1791 aa12.24□□□□□ -0.45
PDPN-203ENST00000376061 GLTPD2A6NH11 291 aa12.23□□□□□ -0.45
PDPN-203ENST00000376061 JAK2O60674 1132 aa12.23□□□□□ -0.45
PDPN-203ENST00000376061 DDAH1O94760 285 aa12.23□□□□□ -0.45
PDPN-203ENST00000376061 NOVP48745 357 aa12.23□□□□□ -0.45
PDPN-203ENST00000376061 SHROOM1Q2M3G4 852 aaPredicted RBP12.23□□□□□ -0.45
PDPN-203ENST00000376061 SYNE3Q6ZMZ3 975 aa12.23□□□□□ -0.45
PDPN-203ENST00000376061 DGKHQ86XP1 1220 aa12.23□□□□□ -0.45
PDPN-203ENST00000376061 CLEC10AQ8IUN9 316 aa12.23□□□□□ -0.45
PDPN-203ENST00000376061 CCDC144CPQ8IYA2 1237 aa12.23□□□□□ -0.45
PDPN-203ENST00000376061 CCDC17Q96LX7 622 aa12.23□□□□□ -0.45
PDPN-203ENST00000376061 LLPHQ9BRT6 129 aaKnown RBP12.23□□□□□ -0.45
PDPN-203ENST00000376061 DEFB129Q9H1M3 183 aa12.23□□□□□ -0.45
PDPN-203ENST00000376061 CREBZFQ9NS37 354 aa12.23□□□□□ -0.45
PDPN-203ENST00000376061 CHMP5Q9NZZ3 219 aa12.23□□□□□ -0.45
PDPN-203ENST00000376061 SSC5DA1L4H1 1573 aa12.23□□□□□ -0.45
PDPN-203ENST00000376061 PITPNM2Q9BZ72 1349 aa12.22□□□□□ -0.45
PDPN-203ENST00000376061 PTPDC1A2A3K4 754 aa12.22□□□□□ -0.45
PDPN-203ENST00000376061 TBC1D12O60347 775 aa12.22□□□□□ -0.45
PDPN-203ENST00000376061 GJB2P29033 226 aa12.22□□□□□ -0.45
PDPN-203ENST00000376061 CDC27P30260 824 aa12.22□□□□□ -0.45
PDPN-203ENST00000376061 TROAPQ12815 778 aa12.22□□□□□ -0.45
PDPN-203ENST00000376061 RRP1BQ14684 758 aaKnown RBP12.22□□□□□ -0.45
PDPN-203ENST00000376061 RTN1Q16799 776 aa12.22□□□□□ -0.45
PDPN-203ENST00000376061 CERKLQ49MI3 558 aaPredicted RBP12.22□□□□□ -0.45
PDPN-203ENST00000376061 CATIPQ7Z7H3 387 aa12.22□□□□□ -0.45
PDPN-203ENST00000376061 SMARCC2Q8TAQ2 1214 aa12.22□□□□□ -0.45
PDPN-203ENST00000376061 KAT14Q9H8E8 782 aa12.22□□□□□ -0.45
PDPN-203ENST00000376061 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.22□□□□□ -0.45
PDPN-203ENST00000376061 FAM217BQ9NTX9 383 aaPredicted RBP12.22□□□□□ -0.45
PDPN-203ENST00000376061 MTMR4Q9NYA4 1195 aa12.22□□□□□ -0.45
PDPN-203ENST00000376061 OTOFQ9HC10 1997 aa12.22□□□□□ -0.45
PDPN-203ENST00000376061 MPHOSPH10O00566 681 aaKnown RBP12.21□□□□□ -0.45
PDPN-203ENST00000376061 DHX16O60231 1041 aaKnown RBP12.21□□□□□ -0.45
PDPN-203ENST00000376061 GDF11O95390 407 aa12.21□□□□□ -0.45
PDPN-203ENST00000376061 JAG1P78504 1218 aa12.21□□□□□ -0.45
PDPN-203ENST00000376061 MAP3K10Q02779 954 aa12.21□□□□□ -0.45
PDPN-203ENST00000376061 POTEGQ6S5H5 508 aa12.21□□□□□ -0.45
PDPN-203ENST00000376061 TMEM179Q6ZVK1 233 aa12.21□□□□□ -0.45
PDPN-203ENST00000376061 PNMA1Q8ND90 353 aa12.21□□□□□ -0.45
PDPN-203ENST00000376061 NUP133Q8WUM0 1156 aa12.21□□□□□ -0.45
PDPN-203ENST00000376061 CHMP4CQ96CF2 233 aa12.21□□□□□ -0.45
PDPN-203ENST00000376061 TMEM47Q9BQJ4 181 aa12.21□□□□□ -0.45
PDPN-203ENST00000376061 STX8Q9UNK0 236 aa12.21□□□□□ -0.45
PDPN-203ENST00000376061 CPLX1O14810 134 aa12.2□□□□□ -0.46
PDPN-203ENST00000376061 CALM1P0DP23 149 aa12.2□□□□□ -0.46
PDPN-203ENST00000376061 CALM2P0DP24 149 aa12.2□□□□□ -0.46
PDPN-203ENST00000376061 CALM3P0DP25 149 aa12.2□□□□□ -0.46
PDPN-203ENST00000376061 TOP1P11387 765 aaKnown RBP12.2□□□□□ -0.46
PDPN-203ENST00000376061 GUCY1A2P33402 732 aa12.2□□□□□ -0.46
PDPN-203ENST00000376061 EPHX2P34913 555 aa12.2□□□□□ -0.46
PDPN-203ENST00000376061 ADD1P35611 737 aaKnown RBP12.2□□□□□ -0.46
PDPN-203ENST00000376061 PKP1Q13835 747 aa12.2□□□□□ -0.46
PDPN-203ENST00000376061 ABCB5Q2M3G0 1257 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms