RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 RBM6P78332 1123 aaKnown RBP16.04■□□□□ 0.16
MSH5-202ENST00000375740 CCDC144BQ3MJ40 725 aa16.04■□□□□ 0.16
MSH5-202ENST00000375740 IPO4Q8TEX9 1081 aaKnown RBP16.04■□□□□ 0.16
MSH5-202ENST00000375740 SHISA4Q96DD7 197 aa16.04■□□□□ 0.16
MSH5-202ENST00000375740 ARPP21Q9UBL0 812 aaPredicted RBP16.04■□□□□ 0.16
MSH5-202ENST00000375740 CLIP2Q9UDT6 1046 aa16.04■□□□□ 0.16
MSH5-202ENST00000375740 ZNF215Q9UL58 517 aaPredicted RBP16.04■□□□□ 0.16
MSH5-202ENST00000375740 TRPC5Q9UL62 973 aaPredicted RBP16.04■□□□□ 0.16
MSH5-202ENST00000375740 V9GY48 417 aaPredicted RBP16.04■□□□□ 0.16
MSH5-202ENST00000375740 XDHP47989 1333 aa16.03■□□□□ 0.16
MSH5-202ENST00000375740 PRPF3O43395 683 aaKnown RBP16.03■□□□□ 0.16
MSH5-202ENST00000375740 LDHBP07195 334 aaKnown RBP16.03■□□□□ 0.16
MSH5-202ENST00000375740 NLRP12P59046 1061 aa16.03■□□□□ 0.16
MSH5-202ENST00000375740 ARID5BQ14865 1188 aa16.03■□□□□ 0.16
MSH5-202ENST00000375740 TPD52L1Q16890 204 aaPredicted RBP16.03■□□□□ 0.16
MSH5-202ENST00000375740 RILPL1Q5EBL4 403 aa16.03■□□□□ 0.16
MSH5-202ENST00000375740 TMED8Q6PL24 325 aaPredicted RBP16.03■□□□□ 0.16
MSH5-202ENST00000375740 KRI1Q8N9T8 703 aaKnown RBP16.03■□□□□ 0.16
MSH5-202ENST00000375740 WDR66Q8TBY9 1149 aa16.03■□□□□ 0.16
MSH5-202ENST00000375740 MCM9Q9NXL9 1143 aa16.03■□□□□ 0.16
MSH5-202ENST00000375740 USP17L8P0C7I0 530 aa16.03■□□□□ 0.16
MSH5-202ENST00000375740 CALM1P0DP23 149 aa16.03■□□□□ 0.16
MSH5-202ENST00000375740 CALM2P0DP24 149 aa16.03■□□□□ 0.16
MSH5-202ENST00000375740 CALM3P0DP25 149 aa16.03■□□□□ 0.16
MSH5-202ENST00000375740 CAPN2P17655 700 aa16.03■□□□□ 0.16
MSH5-202ENST00000375740 GRIK5Q16478 980 aa16.03■□□□□ 0.16
MSH5-202ENST00000375740 SLC4A8Q2Y0W8 1093 aa16.03■□□□□ 0.16
MSH5-202ENST00000375740 KRT222Q8N1A0 295 aa16.03■□□□□ 0.16
MSH5-202ENST00000375740 RPGRQ92834 1020 aaKnown RBP16.03■□□□□ 0.16
MSH5-202ENST00000375740 RBM28Q9NW13 759 aaKnown RBP16.03■□□□□ 0.16
MSH5-202ENST00000375740 VPS54Q9P1Q0 977 aa16.03■□□□□ 0.16
MSH5-202ENST00000375740 MAST2Q6P0Q8 1798 aa16.03■□□□□ 0.16
MSH5-202ENST00000375740 DLEC1Q9Y238 1755 aa16.03■□□□□ 0.16
MSH5-202ENST00000375740 GYS1P13807 737 aa16.02■□□□□ 0.16
MSH5-202ENST00000375740 CDC25BP30305 580 aa16.02■□□□□ 0.16
MSH5-202ENST00000375740 GPSM2P81274 684 aa16.02■□□□□ 0.16
MSH5-202ENST00000375740 CABP5Q9NP86 173 aa16.02■□□□□ 0.16
MSH5-202ENST00000375740 PCDHB6Q9Y5E3 794 aa16.02■□□□□ 0.16
MSH5-202ENST00000375740 ATP2B1P20020 1258 aa16.02■□□□□ 0.16
MSH5-202ENST00000375740 HSPA1LP34931 641 aa16.02■□□□□ 0.16
MSH5-202ENST00000375740 SPECC1Q5M775 1068 aa16.02■□□□□ 0.16
MSH5-202ENST00000375740 ISM2Q6H9L7 571 aa16.02■□□□□ 0.16
MSH5-202ENST00000375740 KCNH3Q9ULD8 1083 aa16.02■□□□□ 0.16
MSH5-202ENST00000375740 DDAH1O94760 285 aa16.02■□□□□ 0.15
MSH5-202ENST00000375740 SERPINB2P05120 415 aa16.02■□□□□ 0.15
MSH5-202ENST00000375740 PDE4BQ07343 736 aa16.02■□□□□ 0.15
MSH5-202ENST00000375740 LONRF3Q496Y0 759 aa16.02■□□□□ 0.15
MSH5-202ENST00000375740 FBXO38Q6PIJ6 1188 aa16.02■□□□□ 0.15
MSH5-202ENST00000375740 ZNF804AQ7Z570 1209 aa16.02■□□□□ 0.15
MSH5-202ENST00000375740 SH3RF3Q8TEJ3 882 aaPredicted RBP16.02■□□□□ 0.15
MSH5-202ENST00000375740 MRFAP1L1Q96HT8 127 aa16.02■□□□□ 0.15
MSH5-202ENST00000375740 LAMB1P07942 1786 aa16.01■□□□□ 0.15
MSH5-202ENST00000375740 XBP1P17861 261 aa16.01■□□□□ 0.15
MSH5-202ENST00000375740 USP5P45974 858 aa16.01■□□□□ 0.15
MSH5-202ENST00000375740 GRIN1Q05586 938 aa16.01■□□□□ 0.15
MSH5-202ENST00000375740 BPIFA3Q9BQP9 254 aa16.01■□□□□ 0.15
MSH5-202ENST00000375740 PHF20Q9BVI0 1012 aa16.01■□□□□ 0.15
MSH5-202ENST00000375740 FBXO2Q9UK22 296 aaPredicted RBP16.01■□□□□ 0.15
MSH5-202ENST00000375740 TSPY2A6NKD2 308 aa16.01■□□□□ 0.15
MSH5-202ENST00000375740 DIXDC1Q155Q3 683 aa16.01■□□□□ 0.15
MSH5-202ENST00000375740 CEP135Q66GS9 1140 aa16.01■□□□□ 0.15
MSH5-202ENST00000375740 TMTC3Q6ZXV5 915 aa16.01■□□□□ 0.15
MSH5-202ENST00000375740 CERKQ8TCT0 537 aa16.01■□□□□ 0.15
MSH5-202ENST00000375740 MKRN1Q9UHC7 482 aaKnown RBP16.01■□□□□ 0.15
MSH5-202ENST00000375740 TUBE1Q9UJT0 475 aa16.01■□□□□ 0.15
MSH5-202ENST00000375740 PAXBP1Q9Y5B6 917 aa16.01■□□□□ 0.15
MSH5-202ENST00000375740 KIAA1551Q9HCM1 1747 aa16■□□□□ 0.15
MSH5-202ENST00000375740 PTPREP23469 700 aa16■□□□□ 0.15
MSH5-202ENST00000375740 PNOCQ13519 176 aa16■□□□□ 0.15
MSH5-202ENST00000375740 C12orf60Q5U649 245 aa16■□□□□ 0.15
MSH5-202ENST00000375740 C15orf52Q6ZUT6 534 aaKnown RBP16■□□□□ 0.15
MSH5-202ENST00000375740 SRBD1Q8N5C6 995 aaKnown RBP16■□□□□ 0.15
MSH5-202ENST00000375740 UBR3Q6ZT12 1888 aa16■□□□□ 0.15
MSH5-202ENST00000375740 FAM205CA6NFA0 338 aa16■□□□□ 0.15
MSH5-202ENST00000375740 ST5P78524 1137 aa16■□□□□ 0.15
MSH5-202ENST00000375740 ELF2Q15723 593 aa16■□□□□ 0.15
MSH5-202ENST00000375740 CRY2Q49AN0 593 aa16■□□□□ 0.15
MSH5-202ENST00000375740 KRBA2Q6ZNG9 492 aa16■□□□□ 0.15
MSH5-202ENST00000375740 CTCFLQ8NI51 663 aaPredicted RBP16■□□□□ 0.15
MSH5-202ENST00000375740 FAM53CQ9NYF3 392 aa16■□□□□ 0.15
MSH5-202ENST00000375740 KRT2P35908 639 aa15.99■□□□□ 0.15
MSH5-202ENST00000375740 GSTO1P78417 241 aa15.99■□□□□ 0.15
MSH5-202ENST00000375740 EARS2Q5JPH6 523 aaKnown RBP15.99■□□□□ 0.15
MSH5-202ENST00000375740 CNNM3Q8NE01 707 aa15.99■□□□□ 0.15
MSH5-202ENST00000375740 RBM17Q96I25 401 aaKnown RBP15.99■□□□□ 0.15
MSH5-202ENST00000375740 QTRT2Q9H974 415 aaKnown RBP15.99■□□□□ 0.15
MSH5-202ENST00000375740 CCDC66A2RUB6 948 aa15.99■□□□□ 0.15
MSH5-202ENST00000375740 UFL1O94874 794 aa15.99■□□□□ 0.15
MSH5-202ENST00000375740 TFAP4Q01664 338 aa15.99■□□□□ 0.15
MSH5-202ENST00000375740 RCSD1Q6JBY9 416 aa15.99■□□□□ 0.15
MSH5-202ENST00000375740 METTL16Q86W50 562 aaKnown RBP15.99■□□□□ 0.15
MSH5-202ENST00000375740 ZNF397Q8NF99 534 aaPredicted RBP15.99■□□□□ 0.15
MSH5-202ENST00000375740 DYNLL2Q96FJ2 89 aa15.99■□□□□ 0.15
MSH5-202ENST00000375740 CD209Q9NNX6 404 aa15.99■□□□□ 0.15
MSH5-202ENST00000375740 ZNF446Q9NWS9 450 aa15.99■□□□□ 0.15
MSH5-202ENST00000375740 BAG3O95817 575 aa15.98■□□□□ 0.15
MSH5-202ENST00000375740 FOXP4Q8IVH2 680 aaPredicted RBP15.98■□□□□ 0.15
MSH5-202ENST00000375740 CEP131Q9UPN4 1083 aa15.98■□□□□ 0.15
MSH5-202ENST00000375740 CNTNAP5Q8WYK1 1306 aa15.98■□□□□ 0.15
MSH5-202ENST00000375740 ATP2B4P23634 1241 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms