RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 CNTNAP4Q9C0A0 1308 aa16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 TULP2O00295 520 aa16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 TFRCP02786 760 aaKnown RBP16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 NT5DC1Q5TFE4 455 aa16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 OXER1Q8TDS5 423 aa16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 STRBPQ96SI9 672 aaKnown RBP16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 CNNM1Q9NRU3 951 aa16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 RIC1Q4ADV7 1423 aa16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 NUP98P52948 1817 aa16.09■□□□□ 0.17
CLCNKA-202ENST00000375692 IRS4O14654 1257 aaPredicted RBP16.08■□□□□ 0.17
CLCNKA-202ENST00000375692 RPS6KA4O75676 772 aa16.08■□□□□ 0.17
CLCNKA-202ENST00000375692 ITGA6P23229 1130 aa16.08■□□□□ 0.17
CLCNKA-202ENST00000375692 RBL2Q08999 1139 aa16.08■□□□□ 0.17
CLCNKA-202ENST00000375692 LONRF2Q1L5Z9 754 aa16.08■□□□□ 0.17
CLCNKA-202ENST00000375692 ARHGEF1Q92888 912 aaKnown RBP16.08■□□□□ 0.17
CLCNKA-202ENST00000375692 AIDAQ96BJ3 306 aa16.08■□□□□ 0.17
CLCNKA-202ENST00000375692 EPB41L4AQ9HCS5 686 aaPredicted RBP16.08■□□□□ 0.17
CLCNKA-202ENST00000375692 FBXO3Q9UK99 471 aa16.08■□□□□ 0.17
CLCNKA-202ENST00000375692 AKR1B15C9JRZ8 316 aaPredicted RBP16.08■□□□□ 0.16
CLCNKA-202ENST00000375692 H3BQF6 201 aa16.08■□□□□ 0.16
CLCNKA-202ENST00000375692 ACTN4O43707 911 aaKnown RBP16.08■□□□□ 0.16
CLCNKA-202ENST00000375692 TXLNAP40222 546 aa16.08■□□□□ 0.16
CLCNKA-202ENST00000375692 SAFBQ15424 915 aaKnown RBP eCLIP16.08■□□□□ 0.16
CLCNKA-202ENST00000375692 CSRNP2Q9H175 543 aa16.08■□□□□ 0.16
CLCNKA-202ENST00000375692 MYO5AQ9Y4I1 1855 aaKnown RBP16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 COL5A3P25940 1745 aaPredicted RBP16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 TCRBV5S4A2TA0A5A2 114 aa16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 VGLL3A8MV65 326 aa16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 COBLO75128 1261 aa16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 CCDC175P0C221 793 aa16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 AFMP43652 599 aa16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 UBE3CQ15386 1083 aa16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 HELBQ8NG08 1087 aaPredicted RBP16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 TTLL11Q8NHH1 800 aa16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 TOMM22Q9NS69 142 aa16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 ADGRG1Q9Y653 693 aa16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 A0A1B0GTH6 734 aa16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 IFNAR1P17181 557 aa16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 MAPK8IP2Q13387 824 aaPredicted RBP16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 RC3H1Q5TC82 1133 aaKnown RBP16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 IFNL3Q8IZI9 196 aa16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 CABP5Q9NP86 173 aa16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 DACH1Q9UI36 760 aa16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 RTCBQ9Y3I0 505 aaKnown RBP16.07■□□□□ 0.16
CLCNKA-202ENST00000375692 ECM29Q5VYK3 1845 aa16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 AKAP11Q9UKA4 1901 aa16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 FAM205CA6NFA0 338 aa16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 PRKAB2O43741 272 aa16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 CD44P16070 742 aaKnown RBP16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 LIFRP42702 1097 aa16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 PLCD1P51178 756 aa16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 CHMP4BP1P59074 171 aa16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 RAD51AP2Q09MP3 1159 aa16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 TBC1D9BQ66K14 1250 aa16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 APTXQ7Z2E3 356 aaKnown RBP16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 ELOA2Q8IYF1 753 aaPredicted RBP16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 SMYD4Q8IYR2 804 aaPredicted RBP16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 TXLNBQ8N3L3 684 aa16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 IGSF22Q8N9C0 903 aa16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 ARMT1Q9H993 441 aa16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 ABCC12Q96J65 1359 aa16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 MYH7P12883 1935 aa16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 A0A087X0B3 334 aa16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 SNAP23O00161 211 aa16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 TTF1Q15361 905 aaPredicted RBP16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 CCDC24Q8N4L8 307 aa16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 NAPBQ9H115 298 aa16.06■□□□□ 0.16
CLCNKA-202ENST00000375692 MBD4O95243 580 aa16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 ABL1P00519 1130 aa16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 MCM6Q14566 821 aa16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 RILPL1Q5EBL4 403 aa16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 ZNF569Q5MCW4 686 aa16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 EPSTI1Q96J88 318 aa16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 ANKZF1Q9H8Y5 726 aa16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 ADAM21Q9UKJ8 722 aa16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 SRPRBQ9Y5M8 271 aaKnown RBP16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 STK36Q9NRP7 1315 aa16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 PATL2C9JE40 543 aaKnown RBP16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 RTN1Q16799 776 aa16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 SRGAP1Q7Z6B7 1085 aa16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 PPFIBP1Q86W92 1011 aa16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 MAGEB6Q8N7X4 407 aa16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 NUP133Q8WUM0 1156 aa16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 PANX2Q96RD6 677 aa16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 PNKPQ96T60 521 aa16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 SUGCTQ9HAC7 445 aa16.05■□□□□ 0.16
CLCNKA-202ENST00000375692 RREB1Q92766 1687 aa16.04■□□□□ 0.16
CLCNKA-202ENST00000375692 APBA3O96018 575 aa16.04■□□□□ 0.16
CLCNKA-202ENST00000375692 TRIM22Q8IYM9 498 aa16.04■□□□□ 0.16
CLCNKA-202ENST00000375692 VGLL2Q8N8G2 317 aa16.04■□□□□ 0.16
CLCNKA-202ENST00000375692 WASF1Q92558 559 aa16.04■□□□□ 0.16
CLCNKA-202ENST00000375692 PLA2G12BQ9BX93 195 aa16.04■□□□□ 0.16
CLCNKA-202ENST00000375692 CCDC151A5D8V7 595 aa16.04■□□□□ 0.16
CLCNKA-202ENST00000375692 LMAN1P49257 510 aa16.04■□□□□ 0.16
CLCNKA-202ENST00000375692 TXNRD1Q16881 649 aa16.04■□□□□ 0.16
CLCNKA-202ENST00000375692 WWC2Q6AWC2 1192 aa16.04■□□□□ 0.16
CLCNKA-202ENST00000375692 CRACR2BQ8N4Y2 399 aaPredicted RBP16.04■□□□□ 0.16
CLCNKA-202ENST00000375692 SPATA20Q8TB22 786 aa16.04■□□□□ 0.16
CLCNKA-202ENST00000375692 AK7Q96M32 723 aa16.04■□□□□ 0.16
CLCNKA-202ENST00000375692 FOXP1Q9H334 677 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms