RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 USP17L10C9JJH3 530 aa20.74■□□□□ 0.91
C6orf48-207ENST00000375642 PRDM1O75626 825 aa20.74■□□□□ 0.91
C6orf48-207ENST00000375642 RASA1P20936 1047 aa20.74■□□□□ 0.91
C6orf48-207ENST00000375642 GUCY1A2P33402 732 aa20.74■□□□□ 0.91
C6orf48-207ENST00000375642 MTMR2Q13614 643 aa20.74■□□□□ 0.91
C6orf48-207ENST00000375642 DSCC1Q9BVC3 393 aa20.74■□□□□ 0.91
C6orf48-207ENST00000375642 CFHR5Q9BXR6 569 aa20.74■□□□□ 0.91
C6orf48-207ENST00000375642 IL25Q9H293 177 aa20.74■□□□□ 0.91
C6orf48-207ENST00000375642 PDHXO00330 501 aa20.73■□□□□ 0.91
C6orf48-207ENST00000375642 SGSM2O43147 1006 aa20.73■□□□□ 0.91
C6orf48-207ENST00000375642 HMGCS2P54868 508 aa20.73■□□□□ 0.91
C6orf48-207ENST00000375642 CTDSPL2Q05D32 466 aa20.73■□□□□ 0.91
C6orf48-207ENST00000375642 GPAT2Q6NUI2 795 aa20.73■□□□□ 0.91
C6orf48-207ENST00000375642 PROCA1Q8NCQ7 364 aaPredicted RBP20.73■□□□□ 0.91
C6orf48-207ENST00000375642 FEZ1Q99689 392 aa20.73■□□□□ 0.91
C6orf48-207ENST00000375642 TMOD4Q9NZQ9 345 aa20.73■□□□□ 0.91
C6orf48-207ENST00000375642 CRHR2Q13324 411 aa20.72■□□□□ 0.91
C6orf48-207ENST00000375642 TAF1CQ15572 869 aaPredicted RBP20.72■□□□□ 0.91
C6orf48-207ENST00000375642 SH3D19Q5HYK7 790 aa20.72■□□□□ 0.91
C6orf48-207ENST00000375642 ACER1Q8TDN7 264 aa20.72■□□□□ 0.91
C6orf48-207ENST00000375642 KANSL2Q9H9L4 492 aa20.72■□□□□ 0.91
C6orf48-207ENST00000375642 ZFYVE28Q9HCC9 887 aa20.72■□□□□ 0.91
C6orf48-207ENST00000375642 CTNNA3Q9UI47 895 aa20.72■□□□□ 0.91
C6orf48-207ENST00000375642 HPS5Q9UPZ3 1129 aa20.72■□□□□ 0.91
C6orf48-207ENST00000375642 ZNF213O14771 459 aa20.71■□□□□ 0.91
C6orf48-207ENST00000375642 HAND2P61296 217 aa20.71■□□□□ 0.91
C6orf48-207ENST00000375642 PKN2Q16513 984 aaKnown RBP20.71■□□□□ 0.91
C6orf48-207ENST00000375642 R3HDMLQ9H3Y0 253 aa20.71■□□□□ 0.91
C6orf48-207ENST00000375642 AGTPBP1Q9UPW5 1226 aa20.71■□□□□ 0.91
C6orf48-207ENST00000375642 LAMB1P07942 1786 aa20.71■□□□□ 0.91
C6orf48-207ENST00000375642 ATAD5Q96QE3 1844 aa20.71■□□□□ 0.91
C6orf48-207ENST00000375642 PHIPQ8WWQ0 1821 aa20.7■□□□□ 0.9
C6orf48-207ENST00000375642 USP14P54578 494 aa20.7■□□□□ 0.9
C6orf48-207ENST00000375642 ICA1Q05084 483 aa20.7■□□□□ 0.9
C6orf48-207ENST00000375642 USP17L2Q6R6M4 530 aa20.7■□□□□ 0.9
C6orf48-207ENST00000375642 CASC1Q6TDU7 716 aa20.7■□□□□ 0.9
C6orf48-207ENST00000375642 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.7■□□□□ 0.9
C6orf48-207ENST00000375642 KIAA1683Q9H0B3 1180 aa20.7■□□□□ 0.9
C6orf48-207ENST00000375642 ARHGEF10LQ9HCE6 1279 aa20.7■□□□□ 0.9
C6orf48-207ENST00000375642 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.7■□□□□ 0.9
C6orf48-207ENST00000375642 SLC45A1Q9Y2W3 748 aa20.7■□□□□ 0.9
C6orf48-207ENST00000375642 CDC45O75419 566 aa20.69■□□□□ 0.9
C6orf48-207ENST00000375642 TFAP4Q01664 338 aa20.69■□□□□ 0.9
C6orf48-207ENST00000375642 PABPC4Q13310 644 aaKnown RBP eCLIP20.69■□□□□ 0.98e-17■■■■□ 24.8
C6orf48-207ENST00000375642 ZYXQ15942 572 aaKnown RBP20.69■□□□□ 0.9
C6orf48-207ENST00000375642 TREML2Q5T2D2 321 aa20.69■□□□□ 0.9
C6orf48-207ENST00000375642 KIAA1211Q6ZU35 1233 aa20.69■□□□□ 0.9
C6orf48-207ENST00000375642 PARK7Q99497 189 aaKnown RBP20.69■□□□□ 0.9
C6orf48-207ENST00000375642 ESYT1Q9BSJ8 1104 aa20.69■□□□□ 0.9
C6orf48-207ENST00000375642 INCENPQ9NQS7 918 aa20.69■□□□□ 0.9
C6orf48-207ENST00000375642 EMILIN3Q9NT22 766 aa20.69■□□□□ 0.9
C6orf48-207ENST00000375642 A0A1W2PRG0 241 aa20.68■□□□□ 0.9
C6orf48-207ENST00000375642 GPR25O00155 361 aa20.68■□□□□ 0.9
C6orf48-207ENST00000375642 ORC4O43929 436 aa20.68■□□□□ 0.9
C6orf48-207ENST00000375642 FGRP09769 529 aa20.68■□□□□ 0.9
C6orf48-207ENST00000375642 TSPY3P0CV98 308 aa20.68■□□□□ 0.9
C6orf48-207ENST00000375642 TSPY8P0CW00 308 aa20.68■□□□□ 0.9
C6orf48-207ENST00000375642 PCP11498 1178 aaKnown RBP20.68■□□□□ 0.9
C6orf48-207ENST00000375642 ATP2B2Q01814 1243 aa20.68■□□□□ 0.9
C6orf48-207ENST00000375642 IMMTQ16891 758 aaKnown RBP20.68■□□□□ 0.9
C6orf48-207ENST00000375642 NOM1Q5C9Z4 860 aaKnown RBP20.68■□□□□ 0.9
C6orf48-207ENST00000375642 FAM47AQ5JRC9 791 aa20.68■□□□□ 0.9
C6orf48-207ENST00000375642 MFSD6Q6ZSS7 791 aa20.68■□□□□ 0.9
C6orf48-207ENST00000375642 CLEC10AQ8IUN9 316 aa20.68■□□□□ 0.9
C6orf48-207ENST00000375642 SIAH1Q8IUQ4 282 aa20.68■□□□□ 0.9
C6orf48-207ENST00000375642 RNF41Q9H4P4 317 aaPredicted RBP20.68■□□□□ 0.9
C6orf48-207ENST00000375642 SH2D4AQ9H788 454 aa20.68■□□□□ 0.9
C6orf48-207ENST00000375642 TOMM22Q9NS69 142 aa20.68■□□□□ 0.9
C6orf48-207ENST00000375642 RANBP6O60518 1105 aaKnown RBP20.67■□□□□ 0.9
C6orf48-207ENST00000375642 EEF2P13639 858 aaKnown RBP20.67■□□□□ 0.9
C6orf48-207ENST00000375642 PTH1RQ03431 593 aa20.67■□□□□ 0.9
C6orf48-207ENST00000375642 AKNAD1Q5T1N1 836 aa20.67■□□□□ 0.9
C6orf48-207ENST00000375642 NEDD1Q8NHV4 660 aa20.67■□□□□ 0.9
C6orf48-207ENST00000375642 C12orf42Q96LP6 360 aa20.67■□□□□ 0.9
C6orf48-207ENST00000375642 PNMA3Q9UL41 463 aa20.67■□□□□ 0.9
C6orf48-207ENST00000375642 U3KPZ7 1027 aaPredicted RBP20.67■□□□□ 0.9
C6orf48-207ENST00000375642 TSPY2A6NKD2 308 aa20.66■□□□□ 0.9
C6orf48-207ENST00000375642 TLR2O60603 784 aa20.66■□□□□ 0.9
C6orf48-207ENST00000375642 CYP2C8P10632 490 aa20.66■□□□□ 0.9
C6orf48-207ENST00000375642 OSBPP22059 807 aa20.66■□□□□ 0.9
C6orf48-207ENST00000375642 RRP12Q5JTH9 1297 aaKnown RBP20.66■□□□□ 0.9
C6orf48-207ENST00000375642 TBC1D10CQ8IV04 446 aa20.66■□□□□ 0.9
C6orf48-207ENST00000375642 STAG1Q8WVM7 1258 aa20.66■□□□□ 0.9
C6orf48-207ENST00000375642 NBPF3Q9H094 633 aa20.66■□□□□ 0.9
C6orf48-207ENST00000375642 TMX2Q9Y320 296 aa20.66■□□□□ 0.9
C6orf48-207ENST00000375642 TACC3Q9Y6A5 838 aa20.66■□□□□ 0.9
C6orf48-207ENST00000375642 IGKV6D-41A0A0C4DH26 115 aa20.65■□□□□ 0.9
C6orf48-207ENST00000375642 FKTNO75072 461 aa20.65■□□□□ 0.9
C6orf48-207ENST00000375642 SMCR8Q8TEV9 937 aaPredicted RBP20.65■□□□□ 0.9
C6orf48-207ENST00000375642 ZNF296Q8WUU4 475 aaPredicted RBP20.65■□□□□ 0.9
C6orf48-207ENST00000375642 MAP4K1Q92918 833 aa20.65■□□□□ 0.9
C6orf48-207ENST00000375642 NYAP2Q9P242 653 aa20.65■□□□□ 0.9
C6orf48-207ENST00000375642 MYH8P13535 1937 aa20.65■□□□□ 0.9
C6orf48-207ENST00000375642 PLIN4Q96Q06 1357 aa20.64■□□□□ 0.89
C6orf48-207ENST00000375642 HOXA7P31268 230 aaPredicted RBP20.64■□□□□ 0.89
C6orf48-207ENST00000375642 IRX3P78415 501 aaPredicted RBP20.64■□□□□ 0.89
C6orf48-207ENST00000375642 CEP95Q96GE4 821 aa20.64■□□□□ 0.89
C6orf48-207ENST00000375642 ASCC2Q9H1I8 757 aaPredicted RBP20.64■□□□□ 0.89
C6orf48-207ENST00000375642 MTMR4Q9NYA4 1195 aa20.64■□□□□ 0.89
C6orf48-207ENST00000375642 CLIP2Q9UDT6 1046 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms