RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 TBC1D31Q96DN5 1066 aa16.36■□□□□ 0.21
NOTCH4-201ENST00000375023 PPP1R16BQ96T49 567 aa16.36■□□□□ 0.21
NOTCH4-201ENST00000375023 FTOQ9C0B1 505 aaKnown RBP eCLIP16.36■□□□□ 0.21
NOTCH4-201ENST00000375023 FAM207AQ9NSI2 230 aaPredicted RBP16.36■□□□□ 0.21
NOTCH4-201ENST00000375023 ZBBXA8MT70 800 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 NOL3O60936 208 aaKnown RBP16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 PLCD1P51178 756 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 DIXDC1Q155Q3 683 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 KIAA1524Q8TCG1 905 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 PCDHB13Q9Y5F0 798 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 MAP3K1Q13233 1512 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 MTX1Q13505 466 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 SCYL2Q6P3W7 929 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 NELFBQ8WX92 580 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 CARD14Q9BXL6 1004 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 SH2D4AQ9H788 454 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 ZBTB40Q9NUA8 1239 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 ABCB4P21439 1286 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 FANCCQ00597 558 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 DLGAP5Q15398 846 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 SPATA5Q8NB90 893 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 PLBD2Q8NHP8 589 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 PARD3BQ8TEW8 1205 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 SLF1Q9BQI6 1058 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 METTL22Q9BUU2 404 aaPredicted RBP16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 LRWD1Q9UFC0 647 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 ZBED4O75132 1171 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 IVLP07476 585 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 LIN9Q5TKA1 542 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 SDR42E1Q8WUS8 393 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 ARHGEF2Q92974 986 aaKnown RBP16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 STMN2Q93045 179 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 EEF2KMTQ96G04 330 aa16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.35■□□□□ 0.21
NOTCH4-201ENST00000375023 TBC1D8O95759 1140 aa16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 LRRC47Q8N1G4 583 aaKnown RBP16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 LRFN2Q9ULH4 789 aa16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 DPP9Q86TI2 863 aa16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 NOC2LQ9Y3T9 749 aaKnown RBP16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 A0A1W2PP64 1363 aa16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 UHRF1BP1LA0JNW5 1464 aa16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 FMNL1O95466 1100 aaPredicted RBP16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 SAT1P21673 171 aa16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 TFAP4Q01664 338 aa16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 CFAP65Q6ZU64 1925 aaKnown RBP16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 DNAJC10Q8IXB1 793 aa16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 GLG1Q92896 1179 aa16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 NAPGQ99747 312 aaPredicted RBP16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 CABP7Q86V35 215 aa16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 ACRBPQ8NEB7 543 aa16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 DNM3Q9UQ16 869 aa16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 USP19O94966 1318 aa16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 MAGED2Q9UNF1 606 aaPredicted RBP16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 ANGEL1Q9UNK9 670 aaKnown RBP16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 THRAP3Q9Y2W1 955 aaKnown RBP16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 CIB2O75838 187 aa16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 VPS41P49754 854 aa16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 USP40Q9NVE5 1235 aa16.34■□□□□ 0.21
NOTCH4-201ENST00000375023 ITKQ08881 620 aa16.33■□□□□ 0.21
NOTCH4-201ENST00000375023 CYP26C1Q6V0L0 522 aa16.33■□□□□ 0.21
NOTCH4-201ENST00000375023 GPR161Q8N6U8 529 aaKnown RBP16.33■□□□□ 0.21
NOTCH4-201ENST00000375023 PPP1R12CQ9BZL4 782 aa16.33■□□□□ 0.21
NOTCH4-201ENST00000375023 SH3TC1Q8TE82 1336 aa16.33■□□□□ 0.2
NOTCH4-201ENST00000375023 ADKP55263 362 aaKnown RBP16.33■□□□□ 0.2
NOTCH4-201ENST00000375023 TTC31Q49AM3 519 aaPredicted RBP16.33■□□□□ 0.2
NOTCH4-201ENST00000375023 HAUS3Q68CZ6 603 aa16.33■□□□□ 0.2
NOTCH4-201ENST00000375023 RPRD2Q5VT52 1461 aaKnown RBP16.33■□□□□ 0.2
NOTCH4-201ENST00000375023 ZNF202O95125 648 aa16.33■□□□□ 0.2
NOTCH4-201ENST00000375023 HDXQ7Z353 690 aa16.33■□□□□ 0.2
NOTCH4-201ENST00000375023 SNX21Q969T3 373 aa16.33■□□□□ 0.2
NOTCH4-201ENST00000375023 CUL4BQ13620 913 aa16.33■□□□□ 0.2
NOTCH4-201ENST00000375023 CCDC170Q8IYT3 715 aa16.33■□□□□ 0.2
NOTCH4-201ENST00000375023 CBX8Q9HC52 389 aa16.33■□□□□ 0.2
NOTCH4-201ENST00000375023 TECP42680 631 aa16.33■□□□□ 0.2
NOTCH4-201ENST00000375023 SDCCAG8Q86SQ7 713 aaPredicted RBP16.33■□□□□ 0.2
NOTCH4-201ENST00000375023 ABCF3Q9NUQ8 709 aa16.33■□□□□ 0.2
NOTCH4-201ENST00000375023 GRIN2AQ12879 1464 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 CETN3O15182 167 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 ANKRD42Q8N9B4 389 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 MMS19Q96T76 1030 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 STIM2Q9P246 746 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 TRPC6Q9Y210 931 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 CLRN2A0PK11 232 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 ALDH3A1P30838 453 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 CCDC105Q8IYK2 499 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 C19orf44Q9H6X5 657 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 DDX21Q9NR30 783 aaKnown RBP eCLIP16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 ELF2Q15723 593 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 LRRC43Q8N309 656 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 DCLK2Q8N568 766 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 UHMK1Q8TAS1 419 aaKnown RBP16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 IP6K1Q92551 441 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 TXNDC9O14530 226 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 ARID4AP29374 1257 aaPredicted RBP16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 GSDMBQ8TAX9 411 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 GNL1P36915 607 aaPredicted RBP16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 GYG1P46976 350 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 GUCY2FP51841 1108 aa16.32■□□□□ 0.2
NOTCH4-201ENST00000375023 UBXN2AP68543 259 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms