RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 CABP7Q86V35 215 aa23.56■■□□□ 1.36
TGFBR1-202ENST00000374994 ATP7BP35670 1465 aa23.56■■□□□ 1.36
TGFBR1-202ENST00000374994 NAA25Q14CX7 972 aa23.56■■□□□ 1.36
TGFBR1-202ENST00000374994 ZNF654Q8IZM8 581 aa23.56■■□□□ 1.36
TGFBR1-202ENST00000374994 ZNF496Q96IT1 587 aaPredicted RBP23.55■■□□□ 1.36
TGFBR1-202ENST00000374994 ADCK5Q3MIX3 580 aa23.55■■□□□ 1.36
TGFBR1-202ENST00000374994 SPTLC3Q9NUV7 552 aa23.55■■□□□ 1.36
TGFBR1-202ENST00000374994 NDUFB9Q9Y6M9 179 aa23.55■■□□□ 1.36
TGFBR1-202ENST00000374994 CTDSPL2Q05D32 466 aa23.55■■□□□ 1.36
TGFBR1-202ENST00000374994 SCRN1Q12765 414 aa23.55■■□□□ 1.36
TGFBR1-202ENST00000374994 MORC3Q14149 939 aa23.55■■□□□ 1.36
TGFBR1-202ENST00000374994 CACTINQ8WUQ7 758 aaKnown RBP23.55■■□□□ 1.36
TGFBR1-202ENST00000374994 TRMT1LQ7Z2T5 733 aaKnown RBP23.55■■□□□ 1.36
TGFBR1-202ENST00000374994 LMNTD2Q8IXW0 634 aa23.55■■□□□ 1.36
TGFBR1-202ENST00000374994 TXKP42681 527 aa23.54■■□□□ 1.36
TGFBR1-202ENST00000374994 SNX29Q8TEQ0 813 aa23.54■■□□□ 1.36
TGFBR1-202ENST00000374994 HIBADHP31937 336 aaKnown RBP23.54■■□□□ 1.36
TGFBR1-202ENST00000374994 DESI2Q9BSY9 194 aa23.54■■□□□ 1.36
TGFBR1-202ENST00000374994 KDM6BO15054 1643 aa23.54■■□□□ 1.36
TGFBR1-202ENST00000374994 RAB17Q9H0T7 212 aa23.54■■□□□ 1.36
TGFBR1-202ENST00000374994 FYB2Q5VWT5 728 aa23.54■■□□□ 1.36
TGFBR1-202ENST00000374994 EDC3Q96F86 508 aaKnown RBP23.54■■□□□ 1.36
TGFBR1-202ENST00000374994 CHAMP1Q96JM3 812 aa23.54■■□□□ 1.36
TGFBR1-202ENST00000374994 PARP2Q9UGN5 583 aa23.54■■□□□ 1.36
TGFBR1-202ENST00000374994 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.54■■□□□ 1.36
TGFBR1-202ENST00000374994 GSDMAQ96QA5 445 aa23.53■■□□□ 1.36
TGFBR1-202ENST00000374994 NDC80O14777 642 aa23.53■■□□□ 1.36
TGFBR1-202ENST00000374994 LONRF3Q496Y0 759 aa23.53■■□□□ 1.36
TGFBR1-202ENST00000374994 DDB1Q16531 1140 aa23.53■■□□□ 1.36
TGFBR1-202ENST00000374994 UNC5CLQ8IV45 518 aa23.53■■□□□ 1.36
TGFBR1-202ENST00000374994 CEP170Q5SW79 1584 aa23.53■■□□□ 1.36
TGFBR1-202ENST00000374994 ADCY7P51828 1080 aa23.53■■□□□ 1.36
TGFBR1-202ENST00000374994 GJC1P36383 396 aa23.52■■□□□ 1.36
TGFBR1-202ENST00000374994 SIRT2Q8IXJ6 389 aa23.52■■□□□ 1.36
TGFBR1-202ENST00000374994 STMN2Q93045 179 aa23.52■■□□□ 1.36
TGFBR1-202ENST00000374994 TEX11Q8IYF3 940 aa23.52■■□□□ 1.36
TGFBR1-202ENST00000374994 NRBP1Q9UHY1 535 aa23.52■■□□□ 1.36
TGFBR1-202ENST00000374994 DDX41Q9UJV9 622 aaKnown RBP23.52■■□□□ 1.36
TGFBR1-202ENST00000374994 DTNBO60941 627 aa23.52■■□□□ 1.36
TGFBR1-202ENST00000374994 ARID4AP29374 1257 aaPredicted RBP23.52■■□□□ 1.36
TGFBR1-202ENST00000374994 NSUN7Q8NE18 718 aaKnown RBP23.52■■□□□ 1.36
TGFBR1-202ENST00000374994 CCDC110Q8TBZ0 833 aa23.52■■□□□ 1.36
TGFBR1-202ENST00000374994 NT5C3AQ9H0P0 336 aa23.52■■□□□ 1.36
TGFBR1-202ENST00000374994 CPSF1Q10570 1443 aaKnown RBP23.52■■□□□ 1.36
TGFBR1-202ENST00000374994 ZNF365Q70YC5 407 aa23.52■■□□□ 1.36
TGFBR1-202ENST00000374994 FANCBQ8NB91 859 aa23.52■■□□□ 1.36
TGFBR1-202ENST00000374994 KLHL7Q8IXQ5 586 aa23.52■■□□□ 1.36
TGFBR1-202ENST00000374994 VPS54Q9P1Q0 977 aa23.52■■□□□ 1.36
TGFBR1-202ENST00000374994 PPARAQ07869 468 aa23.51■■□□□ 1.35
TGFBR1-202ENST00000374994 GALNT17Q6IS24 598 aa23.51■■□□□ 1.35
TGFBR1-202ENST00000374994 PEX26Q7Z412 305 aa23.51■■□□□ 1.35
TGFBR1-202ENST00000374994 PRDM1O75626 825 aa23.51■■□□□ 1.35
TGFBR1-202ENST00000374994 HERC4Q5GLZ8 1057 aaPredicted RBP23.51■■□□□ 1.35
TGFBR1-202ENST00000374994 CACNA2D3Q8IZS8 1091 aa23.51■■□□□ 1.35
TGFBR1-202ENST00000374994 MAGEF1Q9HAY2 307 aa23.51■■□□□ 1.35
TGFBR1-202ENST00000374994 GNGT1P63211 74 aa23.51■■□□□ 1.35
TGFBR1-202ENST00000374994 ZBTB9Q96C00 473 aa23.51■■□□□ 1.35
TGFBR1-202ENST00000374994 BLZF1Q9H2G9 400 aa23.51■■□□□ 1.35
TGFBR1-202ENST00000374994 MAIP1Q8WWC4 291 aa23.51■■□□□ 1.35
TGFBR1-202ENST00000374994 PDLIM2Q96JY6 352 aa23.51■■□□□ 1.35
TGFBR1-202ENST00000374994 WDR66Q8TBY9 1149 aa23.51■■□□□ 1.35
TGFBR1-202ENST00000374994 RRAGAQ7L523 313 aa23.5■■□□□ 1.35
TGFBR1-202ENST00000374994 GBP1P32455 592 aa23.5■■□□□ 1.35
TGFBR1-202ENST00000374994 TCIRG1Q13488 830 aa23.5■■□□□ 1.35
TGFBR1-202ENST00000374994 ZMYM1Q5SVZ6 1142 aa23.5■■□□□ 1.35
TGFBR1-202ENST00000374994 TYW1BQ6NUM6 668 aa23.5■■□□□ 1.35
TGFBR1-202ENST00000374994 EPN1Q9Y6I3 576 aaPredicted RBP23.5■■□□□ 1.35
TGFBR1-202ENST00000374994 C2CD5Q86YS7 1000 aa23.5■■□□□ 1.35
TGFBR1-202ENST00000374994 CCDC151A5D8V7 595 aa23.5■■□□□ 1.35
TGFBR1-202ENST00000374994 UBE3CQ15386 1083 aa23.5■■□□□ 1.35
TGFBR1-202ENST00000374994 KRT71Q3SY84 523 aa23.5■■□□□ 1.35
TGFBR1-202ENST00000374994 DAAM2Q86T65 1068 aa23.5■■□□□ 1.35
TGFBR1-202ENST00000374994 PCDHA5Q9Y5H7 936 aa23.5■■□□□ 1.35
TGFBR1-202ENST00000374994 MED23Q9ULK4 1368 aa23.5■■□□□ 1.35
TGFBR1-202ENST00000374994 SARM1Q6SZW1 724 aa23.5■■□□□ 1.35
TGFBR1-202ENST00000374994 CAPS2Q9BXY5 557 aa23.5■■□□□ 1.35
TGFBR1-202ENST00000374994 CLIC4Q9Y696 253 aa23.5■■□□□ 1.35
TGFBR1-202ENST00000374994 CIB2O75838 187 aa23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 ADD1P35611 737 aaKnown RBP23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 NGLY1Q96IV0 654 aa23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 ZC3H12CQ9C0D7 883 aaKnown RBP23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 CCDC63Q8NA47 563 aa23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 ARPP21Q9UBL0 812 aaPredicted RBP23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 BUB1BO60566 1050 aaPredicted RBP23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 CLNS1AP54105 237 aaKnown RBP23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 LIN9Q5TKA1 542 aa23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 FEZ2Q9UHY8 353 aaPredicted RBP23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 E7EVH7 732 aa23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 PCP11498 1178 aaKnown RBP23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 C11orf57Q6ZUT1 292 aaPredicted RBP23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 CTTNBP2NLQ9P2B4 639 aa23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 FGAP02671 866 aa23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 CALCRLQ16602 461 aa23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 INF2Q27J81 1249 aa23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 TSNAXIP1Q2TAA8 658 aa23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 IFNL3Q8IZI9 196 aa23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 FAM207AQ9NSI2 230 aaPredicted RBP23.49■■□□□ 1.35
TGFBR1-202ENST00000374994 EXOC7Q9UPT5 735 aa23.48■■□□□ 1.35
TGFBR1-202ENST00000374994 WDR44Q5JSH3 913 aa23.48■■□□□ 1.35
TGFBR1-202ENST00000374994 PBRM1Q86U86 1689 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms