RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 TXLNGQ9NUQ3 528 aa9.22□□□□□ -0.93
HSPG2-203ENST00000374695 TRIM56Q9BRZ2 755 aaKnown RBP9.22□□□□□ -0.93
HSPG2-203ENST00000374695 CD2APQ9Y5K6 639 aa9.22□□□□□ -0.93
HSPG2-203ENST00000374695 F6X3S4 739 aa9.22□□□□□ -0.93
HSPG2-203ENST00000374695 GSTA1P08263 222 aa9.22□□□□□ -0.93
HSPG2-203ENST00000374695 GSTA2P09210 222 aa9.22□□□□□ -0.93
HSPG2-203ENST00000374695 WWC3Q9ULE0 1092 aa9.22□□□□□ -0.93
HSPG2-203ENST00000374695 ANGPTL3Q9Y5C1 460 aa9.22□□□□□ -0.93
HSPG2-203ENST00000374695 CCNT1O60563 726 aaKnown RBP9.22□□□□□ -0.93
HSPG2-203ENST00000374695 SERPINB6P35237 376 aa9.22□□□□□ -0.93
HSPG2-203ENST00000374695 APLFQ8IW19 511 aaPredicted RBP9.22□□□□□ -0.93
HSPG2-203ENST00000374695 CCDC13Q8IYE1 715 aa9.22□□□□□ -0.93
HSPG2-203ENST00000374695 CTTNBP2NLQ9P2B4 639 aa9.22□□□□□ -0.93
HSPG2-203ENST00000374695 AMFRQ9UKV5 643 aa9.22□□□□□ -0.93
HSPG2-203ENST00000374695 TSC1Q92574 1164 aa9.22□□□□□ -0.93
HSPG2-203ENST00000374695 RIOK1Q9BRS2 568 aaKnown RBP9.22□□□□□ -0.93
HSPG2-203ENST00000374695 AK2P54819 239 aa9.22□□□□□ -0.93
HSPG2-203ENST00000374695 FNBP4Q8N3X1 1017 aaPredicted RBP9.22□□□□□ -0.93
HSPG2-203ENST00000374695 ARHGEF10LQ9HCE6 1279 aa9.22□□□□□ -0.93
HSPG2-203ENST00000374695 ZMYM4Q5VZL5 1548 aa9.22□□□□□ -0.93
HSPG2-203ENST00000374695 ANO1Q5XXA6 986 aa9.22□□□□□ -0.93
HSPG2-203ENST00000374695 LRRC2Q9BYS8 371 aa9.22□□□□□ -0.93
HSPG2-203ENST00000374695 ANKRD13DQ6ZTN6 518 aa9.21□□□□□ -0.93
HSPG2-203ENST00000374695 LRRC23Q53EV4 343 aaPredicted RBP9.21□□□□□ -0.93
HSPG2-203ENST00000374695 PTPDC1A2A3K4 754 aa9.21□□□□□ -0.93
HSPG2-203ENST00000374695 LMNB2Q03252 620 aa9.21□□□□□ -0.93
HSPG2-203ENST00000374695 POSTNQ15063 836 aa9.21□□□□□ -0.93
HSPG2-203ENST00000374695 JADE1Q6IE81 842 aa9.21□□□□□ -0.93
HSPG2-203ENST00000374695 NBPF3Q9H094 633 aa9.21□□□□□ -0.93
HSPG2-203ENST00000374695 RNF113AO15541 343 aaKnown RBP9.21□□□□□ -0.93
HSPG2-203ENST00000374695 SLC9C2Q5TAH2 1124 aa9.21□□□□□ -0.93
HSPG2-203ENST00000374695 FBXO41Q8TF61 875 aa9.21□□□□□ -0.93
HSPG2-203ENST00000374695 HELLSQ9NRZ9 838 aa9.21□□□□□ -0.93
HSPG2-203ENST00000374695 UNC13AQ9UPW8 1703 aa9.21□□□□□ -0.93
HSPG2-203ENST00000374695 ZBTB24O43167 697 aaPredicted RBP9.21□□□□□ -0.93
HSPG2-203ENST00000374695 SART1O43290 800 aaKnown RBP9.21□□□□□ -0.93
HSPG2-203ENST00000374695 GPTP24298 496 aa9.21□□□□□ -0.93
HSPG2-203ENST00000374695 IRX5P78411 483 aaPredicted RBP9.21□□□□□ -0.93
HSPG2-203ENST00000374695 KRT81Q14533 505 aa9.21□□□□□ -0.93
HSPG2-203ENST00000374695 MAGEB6Q8N7X4 407 aa9.21□□□□□ -0.93
HSPG2-203ENST00000374695 SH3GL3Q99963 347 aa9.21□□□□□ -0.93
HSPG2-203ENST00000374695 THUMPD2Q9BTF0 503 aaKnown RBP9.21□□□□□ -0.93
HSPG2-203ENST00000374695 MRPL46Q9H2W6 279 aaKnown RBP9.21□□□□□ -0.93
HSPG2-203ENST00000374695 STX17P56962 302 aa9.21□□□□□ -0.94
HSPG2-203ENST00000374695 RAD51AP2Q09MP3 1159 aa9.21□□□□□ -0.94
HSPG2-203ENST00000374695 RASIP1Q5U651 963 aa9.21□□□□□ -0.94
HSPG2-203ENST00000374695 SPDL1Q96EA4 605 aa9.21□□□□□ -0.94
HSPG2-203ENST00000374695 FANCCQ00597 558 aa9.21□□□□□ -0.94
HSPG2-203ENST00000374695 SYF2O95926 243 aaKnown RBP9.21□□□□□ -0.94
HSPG2-203ENST00000374695 APOEP02649 317 aa9.21□□□□□ -0.94
HSPG2-203ENST00000374695 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.21□□□□□ -0.94
HSPG2-203ENST00000374695 MYH15Q9Y2K3 1946 aa9.21□□□□□ -0.94
HSPG2-203ENST00000374695 NOP56O00567 594 aaKnown RBP9.21□□□□□ -0.94
HSPG2-203ENST00000374695 ASPHQ12797 758 aa9.21□□□□□ -0.94
HSPG2-203ENST00000374695 PPP2R5DQ14738 602 aa9.21□□□□□ -0.94
HSPG2-203ENST00000374695 SND1Q7KZF4 910 aaKnown RBP eCLIP9.21□□□□□ -0.945e-7■■■□□ 16.8
HSPG2-203ENST00000374695 CNOT10Q9H9A5 744 aaKnown RBP9.21□□□□□ -0.94
HSPG2-203ENST00000374695 CDK13Q14004 1512 aaKnown RBP9.21□□□□□ -0.94
HSPG2-203ENST00000374695 NUP160Q12769 1436 aa9.21□□□□□ -0.94
HSPG2-203ENST00000374695 NLRP12P59046 1061 aa9.21□□□□□ -0.94
HSPG2-203ENST00000374695 HOOK2Q96ED9 719 aa9.21□□□□□ -0.94
HSPG2-203ENST00000374695 SETDB2Q96T68 719 aa9.21□□□□□ -0.94
HSPG2-203ENST00000374695 KPNA2P52292 529 aaKnown RBP9.2□□□□□ -0.94
HSPG2-203ENST00000374695 TRPC6Q9Y210 931 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 H0YCG3 227 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 NMIQ13287 307 aaPredicted RBP9.2□□□□□ -0.94
HSPG2-203ENST00000374695 MCTP2Q6DN12 878 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 CCHCR1Q8TD31 782 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 RPRD2Q5VT52 1461 aaKnown RBP9.2□□□□□ -0.94
HSPG2-203ENST00000374695 A0A087WUV0 522 aaPredicted RBP9.2□□□□□ -0.94
HSPG2-203ENST00000374695 MAN1A2O60476 641 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 BAG2O95816 211 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 PYGLP06737 847 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 PDE4DQ08499 809 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 SEPT2Q15019 361 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 C20orf194Q5TEA3 1177 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 RMDN2Q96LZ7 410 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 SCOCQ9UIL1 159 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 SCHIP1Q9P0W5 487 aaPredicted RBP9.2□□□□□ -0.94
HSPG2-203ENST00000374695 MYO5CQ9NQX4 1742 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 MX2P20592 715 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 ANKRD44Q8N8A2 993 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 MCM9Q9NXL9 1143 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 ABCC1P33527 1531 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 ARHGEF11O15085 1522 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 MAGEA9P43362 315 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 AFAP1Q8N556 730 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 NT5C3AQ9H0P0 336 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 ANGPTL2Q9UKU9 493 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 KDM2BQ8NHM5 1336 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 CFAP61Q8NHU2 1237 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 SNRKQ9NRH2 765 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 RAB20Q9NX57 234 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 EFCAB8A8MWE9 144 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 SESN3P58005 492 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 NONOQ15233 471 aaKnown RBP eCLIP9.2□□□□□ -0.942e-6■■■■□ 19.8
HSPG2-203ENST00000374695 RINT1Q6NUQ1 792 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 MMS22LQ6ZRQ5 1243 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 VPS37BQ9H9H4 285 aa9.2□□□□□ -0.94
HSPG2-203ENST00000374695 HMGXB3Q12766 1538 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms